Detail


ID : Ahg945467

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945467|scaffold_701696.1
Sequence
AGAGCGAAAA ATTCATCGAA ATGGATTTCA TCTCATCTCT AATCGTGGGC TTTGCTCAGG TGTTGTGTGA ATCTATGAAT ATGGCGGACA GAAGAGGACA CAACACTGAT CTCAGACAAG CCATCACTGA TCTCGAAACA GCCATCGGTG ACTTGAAGGC CATACGTGAT GACCTGAATT TACGGATCCA ACAAGACGAT CTAGAGGGAC GAAGCTGCTC CAATCGTGCC AGAGAGTGGC TTAGCGCGGT GCAAGCAACA GAGACTAAAG CAGCCTCCAT TTTAGTGAGG TTTAGGCGTC GGGAACAGAG GACCAGAATG CGGAGGAGAT GCCTCGGTTG TTTCGGCTGT GCCGACTACA AACTGTGCAA TAAGGTTTGT GCGACATTGA AGAGCATTGA TGAGCTGAGA GAACGCTCTG AAGATATTAA AACAGATGGC GGGTCAATTC AACAAACATG TAGGGAGATA CCCATCAAGT CCGTGGTCGG AAATACCACG ATGATGGAAC GGGTTATGGA ATTTCTTAGT GAAGAAGAAG AAAGAGGAAT CATCGGGGTT TACGGACCTG GTGGGGTTGG GAAGACAACG TTAATGCAGA GTATTAACAA CGAGCTGATC ACAAAAGGAC ATCAGTATGA TGTACTGATT TGGGTTCAAA TGTCCCGAGA ATTCGGCGAG TGTACAATTC AGCAAGCTGT TGGAGCGCGG TTGGGTTTAT CTTGGGACGA GAAGGAGACC GGTGAAAACA GAGCTTTGAA GATATACAGA GCTTTGAGTC AGAAACGTTT CTTGTTGTTG CTAGATGATG TCTGGGAAGA GATAGACTTG GAGAAAACTG GAGTTCCTCG ACCTGACAGG GAAAACAAAT GCAAGATGAT GTTCACGACA CGGTCTATGG CATTATGCAG CAATATGGGT GCGGAATACA AGTTGAGAGT GGAGTTTCTG GAGAAGAAAT ACGCGTGGGA GCTGTTCTGT AGTAAGGTAG GGAGAAAAGA TCTCTTGGAG TCATCATCAA TTCGCCGGCT CGCTGAGATT ATAGTGAGTA AATGTGGAGG ATTGCCGCTA GCGTTGATCA CTTTAGGAGG AGCCATGGCT CACAGAGAGA CCGAAGAAGA GTGGATCCAC GCTAGTGAAG TTCTGACTAG ATTTCCAGCA GAGATGAAGG GTATGAACTA TGTATTTGCC CTTTTAAAAT TCAGCTACGA CAATCTCGAT AGTGATCTGC TCCGGTCTTG TTTCTTGTAC TGCGCTTTAT TCCCGGAAGA ACATTCTATA GAGATAGAAC AGCTTGTTGA GTACTGGGTG GGCGAAGGGT TTCTCACCAG CTCCCATGGC GTTAACACCA TTTACAAGGG ATATTTTCTG ATTGGGGATC TGAAAGCTGC ATGTTTATTG GAAACCGGAG ATGAGAAAAC ACAGGTGAAG ATGCATAATG TGGTAAGAAG CTTTGCACTG TGGATAGCAT CTGAACAGGG GACTTACAAG GAGCTGATCC TAGTTGAGCC TAACATGGGA CATACTGAAG CTCCTAAAGC AGAAAACTGG CGACAAGCGT TGGTGATTTC ATTGATAGAT AACAGAATCC AGACCTTGCC TGAAAAACCC ATATGCCCGA AACTGACAAC ACTGATGCTC CAACGGAACA GCTCTTTGAA GAAGATTTCA ACAGGGTTTT TCATGCATAT GCCTACTCTC AGGGTCTTGG ACTTGTCTTT CACAAGTATC ACTGAGATTC CGTTGTCTAT TAAGTATTTG GTGGAGTTGT ATCATCTGTC TATGTCAGGA ACAAAGATAA GTGTATTGCC CCGGGAGCTT GGTAATCTTA GAAAGCTGAA GCATCTGGAC CTACAAAGAA CTCAGTTTCT TCAGACGATC CCTCGAGATG CCATATGTTG GCTGAGCAAG CTCGAGGTTC TGAACTTGTA CTACAGTTAT GCGGGTTGGG AACTGCAGAG CTTTGGAGAA GATGAAGTAG AAGAACTCGG TTTTGATGAC TTGGAATACT TGGAAAACCT AACCACACTT GGTATCACTG TTCTCTCGTT GGAGACCCTA AAAACTCTCT ACGAGTTTGG GGCCTTGCAT AAACATATAC AGCACCTCCA CATTGAAGAG TGCAATGGTC TCCTCAACTT CAATCTCCCA TCACTCACTA ACCATGGCAG GAACCTGAGA AGACTTAGCA TTAAAAGTTG CCATGAGTTG GAGTACCTGG TCACACCAAT AGATGTTGTT GAAAATGATT GGCTTCCAAG ACTAGAGGTT CTGACGTTAC ACAGCCTTCA TAAATTAAGC AGAGTGTGGA GAAATCCTGT AAGCGAAGAA GAGTGTCTGC GGAATATCCG TTGCATAAAT ATTTCACACT GCAACAAGCT GAAGAATGTG TCATGGGTTC CGAAACTCCC AAAGCTAGAG GTGATTGACT TGTTCGACTG CAGAGAGCTA GAGGAATTGA TAAGTGAACA CGAGAGTCCA TCCGTTGAAG ATCCAACATT GTTCCCAAGC CTGAAGACCT TGACAGCAAG GGATCTCCCA GAACTAAAGA GCATCCTCCC ATCTCGATTT TCTTTCCAAA AAGTTGAAAC TTTAGTCATC ACTAATTGCC CCAAAGTTAA GAAACTGCCA TTTCAGGAGA CGAACATGCC AAGAGTTTAT TGTGAGGAGA AATGGTGGAA TGCACTGGAA AAAGATGAAC CAAACAAAGA GCTTTGTTAT TTACCGCGCT TTGTTCCAAA TTGATATGAG AGCTAATTAA GAGC
Length2764
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6330463.. 6333213
Download Sequence
A.thaliana
AGI-codeAT4G26090.1
DescriptionNB-ARC domain-containing disease resistance protein
TAIR curator summaryEncodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.
Alias[RPS2][RESISTANT TO P. SYRINGAE 2]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg480590 NAC domain containing protein 36
15.7162 Ahg945493 pumilio 6
23.4947 Ahg926757 Calmodulin binding protein-like
25.4755 Ahg471548 ELM2 domain-containing protein
29.8998 Ahg471506 Protein of unknown function (DUF1262)
30.0333 Ahg486820 TIC-like
30.1662 Ahg478871 NB-ARC domain-containing disease resistance protein
30.3974 Ahg943226 cysteine-rich RLK (RECEPTOR-like protein kinase) 40
31.5436 Ahg316232 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
39.3446 Ahg474924 regulatory protein (NPR1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression