| Annotation |
|---|
| Description | jgi|Araly1|945493|scaffold_701722.1 |
| Sequence |
AGAGCAATAT CCTTGAAGAA ATGGCAACTG AGAATCCTAT TAGGATGTCT GGAAGCAATG AAAGATGGTC TAATTCTAGG AAAGTTTCTG TTCCTAATCG AAGTGGCAGT GCGCCACCGA GCATGGAGGG GTCTTTTCTA GCTGTGGATA ATCTATTGTC ACGACAGGGC GGCTCAGGTT ACAATAACTT GAAGCTACCG AGTTACGGGT TTGAGGAGCC TGTGGCCACT CATCCTTCTT CTAAACACAA CCTTAATCGC ATACCTTCCC CACCTATTTA TTACCCTACT GATTATCAGT TCATAGACAA TCGTGTAGGT AGATTTAGAA GTAATCAGGG ATTGAATAAA GTTAGTTCTC CTATTCATTT GTCCCAAGGT AAACTTCCTA CTCATAAGGA AGTGTCTGAG GATGAAAGCT CCCAACAGTT ATCTGTTACT AGTGTTTCAG ATAGGACTAA TGGGTTGGAC ATTTCGCCTG GTTCTCAAAG TTTGGCTGAT TTCAGGCAGG ATGATAATTC TTCTGGGCCG ACCCTTCAAC ATAGTCGGTC TAACTCTTCA AATGGTGAAG TGAACACAGC GGATGAGAGT GGTAACTTCT CAGAGATGTC AGATGATGTC ATGGTTAAAG ATAATGCTGC TTCAACAGCA AGAGCTTCCA TTGGCAATGA GAAGAATCCA GATGAATCGA CTATCATCTC TAAAATGAAG AATACTAACA TATCCGGACC TGGAACGGCT AAATACCCTC GAGAACCAAG GTATGCACAG CCAGAAAGGC AGCTGCATCA ACAGCAAAAT AATGCAACCT GGATTCAAAA TGGCAGCAAA ATGGGTTCTC ATGGTGTAAA CGATGCAGTT ATCGGGACCG GACAGTTTCA TTATGGACAA CCTTACAAGT TCTCGGGTGA TGGTCAGCCT GTACTTCAGT CTTCCGGTTT TACGCCGCCT CTACTTTACA CTGCTACCCA AACGGCCTAT ATGACTTCAC CGGCTCATGT CTATAATATG CAGTCTCCTG CTGTTTATTC TCCTCAATAT GGTTATGGAC CATACACCAA CATGATCCCA CAGTTTATGC CTGGATACCC TTCCCATGGT TCTGTTCCAG TTATTGTCAG TCCAGATTTC GTTCCTCAAT TATCTGGGCC AAGTGCAGGA AATGTAGTCC ACGGAGGTGA AATGCAGTAT GCGGAGAAGC TCTATGTTCC ACCAGGACAA CCTTCTTTTC CAGATCCTAT GTATATGCAG TACTGTCAAC AGTCATTTGG GCAGATGGAA CCGCTGGCTC CTAGGAATCA CACGAATGCT CCTGAGTCTC AGAAAGATGA TCCAAAGTTC CTTCGACAAA TAAGAGGGCC AAGTAACTCT AATATGGGTA GAACGGGAAT GGGTGTTAAT TATTATGGAA TCCAGCCAAA TATGGGCATT ATGGTGCAGT ATCTGCCTAC ACAGCTCGGC CCTCCTCTTT CACCAGGTCC TGTTCCCTAT GTCGAGGCAT ATCCTGGATG GCAGTCACAA GGGAGCTTAG AAGGTGCCAA TGGCCCTCGA TTGTGCAATT TTCTTGAAGA GCTGAAATCT GGGAAAGGTA GGAGGTTTGA TCTATCTGAC ATCACAGGAC ACATTGTTGA ATTCAGTGCG GATCAACATG GGAGCAGATT TATTCAGCAA AAGCTTGAGA ATTGTAAACC AGAAGAAAAA GCAGCTGTCT TTAGGGAAAT TCTTCCTCAT GCTTGCAAAC TCATGACAGA TGTGTTTGGC AATTATGTCA TTCAGAAGTT TTTCGAATAT GGAAACTCAG CACAGAGAAA GGAACTCGCC GATCAACTCA TGGGACAGAT AGTACCACTT AGTCTGCAGA TGTATGGTTG TCGCGTGATA CAAAAGGCTC TTGATGTCAT AGAACCTGAT CAGAGAGTTC GTTTAGCACG TGAACTTGAT GGGCAGGTCA TGAGATGTGT TCGGGACCAG AATGGAAACC ATGTGATCCA GAAATGCATC GAGAACATCC CAGCAGACAG AGTTGGGTTC ATGTTACATG CATTCCGTGG TCAAGTTTCC TCGCTCTCTA TGCATCCTTA TGGCTGCCGT GTCATACAGA GGCTTTTGGA GCGTTGCTCG CATGACCATC AATGTAGGTT CATTACTGAG GAGATACTGG AATCAGTATG CGTCCTTTCC AAGGACCAAT ATGGTAATTA TGTCACACAG CATGTCTTGG AGAAAGGGAC ATCTGAAGAA AGGGAGAGAA TCGTGAGAAA ACTCTCAGGG CACATCGTGC AGCTTAGCCT ACATAAATTT GCATCAAATG TTATAGAAAA GTGTCTGGAG TATGGTGGTC GAATTGAGCG GGACCTCATC ATCAAAGAGA TTGCAGGGCC TGATGAGAGC TATAATAGTC TATTGATGAT GATGAAAGAC CAGTATGGAA ACTATGTGGT GCAGAAGATA TTCGAGACAT GTACGGCTGA TCAGCGTGCA ACATTGTTCA GCAGAGTCAG AATGCATGCA TCTGCATTGA AGAAATACAC ATATGGGAAA CATATTGTTA CTCGTTTGGA GCAGCCCTTT ATTGAAGAAA ACCAAGAATT GAGATGATGA GTGGCTTTCT GATTTGA |
| Length | 2617 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 6431220.. 6434758 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G25880.1 |
| Description | pumilio 6 |
| TAIR curator summary | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. |
| Alias | [APUM6][PUM6][pumilio 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg488148 | ARF GTPase-activating protein |
| 6.32456 |
Ahg496800 | indole-3-acetic acid inducible 9 |
| 7.74597 |
Ahg319845 | nucleic acid binding;zinc ion binding;DNA binding |
| 8.30662 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 9.48683 |
Ahg494187 | D6 protein kinase like 2 |
| 12.49 |
Ahg927706 | Flavodoxin family protein |
| 13.4907 |
Ahg495433 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 14.4568 |
Ahg920663 | B-block binding subunit of TFIIIC |
| 14.9666 |
Ahg933921 | Protein of unknown function (DUF3527) |
| 15.7162 |
Ahg945467 | NB-ARC domain-containing disease resistance protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|