Detail



ID : Ahg945926

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945926|scaffold_702155.1
Sequence
TGATCACTAC CGACACGCTA ATGGCTATTG GAGATAGAGC TATGTTCACT GTTTTGCTTA TATTCATTGC TTTGATCTCT GGATTCTCTA TTGTTAGTTG TGTTACTGAT CCATCTGATG TTCAAGCCCT TCAAGTTTTG TATACTTCAC TAAATAGTCC TTCACAGTTA ACCAATTGGA AAAATGGTGG TGGTGATCCA TGTGGAGAGT CATGGAAAGG GATTACTTGT GAGGGCTCTG CAGTTGTCTC TATAGATATA TCGGATTTAG GAGTCTCTGG CACTCTTGGA TACTTGCTCT CAGACTTAAT GTCACTCAGA AAATTGGATG TTAGTGGTAA CAGCATCCAT GATACACTTC CATATCAGTT GCCACCGAAT CTCACAAGCC TAAATCTTGC GAGAAACAAC CTAAGTGGTA ACCTTCCATA CTCCATATCC GCCATGGGTT CTCTTTCGTA TTTGAATGTA AGTGGTAATT CACTTACTAT GTCGATAGGA GATATCTTTG CTGATCACAA GTCACTGTCA ACCTTGGACC TTTCTCATAA CAACTTCAGT GGCGATCTTC CGAGTTCCTT AAGCACAGTG TCCGCACTTT CCGTTCTTTA TGTTCAGAAC AATCAGTTGA CAGGTTCTAT CGATGTTCTC TCGGGTTTGC CTTTGACAAC GTTAAATGTT GCAAACAATC ATTTCAATGG ATCCATACCT AAGGAGCTTA GCTCTATTCA GACCTTAATA TATGATGGTA ATTCCTTTGA TAACGTCCCT GCTACTCCTC AGCCAGAAAG ACCTGGCAAA AAAGGAGAGC CTTCTGGTTC TAAGAAACCC AAAATTGGTT CTGAAAAGAA ATCTTCAGAC TCTGGCAAGG GTTTGTCTGG TGGAGTAGTC ACTGGTATAG TGTTCGGTTC TCTATTTGTT GCTGGTATTA TAGCACTTGT TCTTTACTTG TGCCTTCACA AGAAAAAAAG GAAGGTTGGA GGAAGTACAA GAGCTTCCCA AAGAAGTCTT CCACTTAGTG GAACACCTGA GATGCAAGAG CAGAGGGTAA AAAGTGTAGC ATCCGTTGCA GACTTGAAGT CTTCACCTGC AGAAAAAGTA ACTGTTGATC GGGTTATGAA GAACGGGTCT ATAAGTAGAA TAAGATCTCC AATCACTGCT TCACAATACA CTGTTTCCTC TCTGCAAGTT GCAACAAACA GCTTTAGTCA AGAAAACATC ATCGGTGAAG GTTCTCTAGG CCGTGTCTAT AGAGCAGAGT TCCCCAATGG AAAGATAATG GCGATTAAGA AGATTGATAA TGCAGCACTT TCATTACAAG AAGAAGATAA TTTCTTAGAA GCCGTTTCAA ACATGTCGCG CTTGAGGCAT CCAAACATTG TTCCCTTGGC TGGATACTGC ACTGAGCATG GTCAACGTCT TTTAGTGTAT GAATATGTGG GAAATGGGAA TCTAGATGAT ATGCTTCACA CGAATGATGA TAGGAGCATG AATCTTACTT GGAATGCGCG TGTTAAAGTG GCACTTGGAA CCGCCAAGGC TTTAGAGTAC TTGCACGAAG TTTGCTTGCC TTCAATTGTA CATAGAAACT TCAAATCGGC GAATATATTG CTCGATGAAG AACTTAATCC TCACTTATCA GACAGTGGTT TAGCTGCTTT GACACCTAAC ACTGAGAGAC AGGTTTCAAC TCAAGTGGTA GGTTCATTTG GATACAGCGC TCCAGAGTTT GCATTGTCGG GAATTTATAC TGTGAAAAGT GATGTATACA CTTTTGGAGT AGTCATGCTT GAGCTCTTAA CTGGTCGGAA GCCTCTTGAC AGCTCGAGGA CGAGAGCAGA GCAATCACTA GTGAGATGGG CTACACCACA GCTTCACGAT ATAGATGCTT TGTCTAAAAT GGTTGATCCT TCTCTTAATG GCATGTATCC AGCTAAGTCT CTGTCTCGTT TTGCGGATAT CATTGCTCTC TGTATTCAGC CGGAACCAGA GTTCAGGCCT CCAATGTCAG AGGTGGTGCA ACAGCTAGTG AGATTAGTTC AAAGGGCAAG TGTTGTCAAA CGACGATCTA GTGATGACAC TGGATTTTCT TACAGGACAC CTGAACACGA GCACATCGAT ATCTCATACT GAGTAAATGA TCCAAAACTA CT 
Length2152
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8200848.. 8204559
Download Sequence
A.thaliana
AGI-codeAT4G22130.1
DescriptionSTRUBBELIG-receptor family 8
TAIR curator summary
Alias[SRF8][STRUBBELIG-receptor family 8]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg494424 protein dimerizations
6.32456 Ahg482513 DNAJ heat shock N-terminal domain-containing protein
12.083 Ahg492104 Galactosyltransferase family protein
25.2785 Ahg927786 Plant protein of unknown function (DUF827)
30.5778 Ahg943115 sterol-4alpha-methyl oxidase 1-1
34.0588 Ahg932895 Tetratricopeptide repeat (TPR)-like superfamily protein
38.3667 Ahg474202 calcium-dependent protein kinase 33
40.8167 Ahg471065 F-box and associated interaction domains-containing protein
41.7852 Ahg897626
44.6318 Ahg476282 other RNA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression