Detail



ID : Ahg943115

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943115|scaffold_603659.1
Sequence
AACACTCACC GTGAAAAACC ATGATTCCTT ACGCCACAAT CGAAGAAGCT TCAATCGCAC TCGGACGAAA CCTCACACGG CTCGAAACTC TGTGGTTCGA TTACTCCGCC ACAAAGTCCG ATTACTATCT CTACTGTCAC AACATTTTGT TCTTGTTCCT CGTCTTCTCT CTCGTTCCTC TCCCTCTTGT TTTCGTCGAA TTGGCTCGAT CTGCTTCTGG TTGGTTTAAT CGGTATAAGA TCCAACCTAA GGTTAATTAC TCTTTATCTG ATATGTTCAA ATGTTACAAA GACGTCATGA CCATGTTTAT CCTCGTCGTT GGTCCGTTGC AACTCGTTTC TTATCCTTCC ATTCAGATGA TTGAGATTCG ATCTGGATTA CCATTACCAA CAATAACAGA GATACTGTCA CAGTTAGTAG TCTACTTCTT GATAGAAGAC TACACTAACT ACTGGGTCCA TAGATTCTTT CATAGTAAAT GGGGTTACGA CAAGATTCAT CGAGTTCATC ACGAGTATAC AGCTCCGATA GGATATGCTG CTCCATATGC ACATTGGGCT GAAGTTTTGC TTCTCGGAAT CCCAACGTTT ATGGGACCAG CTATTGCTCC TGGTCACATG ATAACCTTTT GGTTGTGGAT AGCTTTAAGG CAAATGGAGG CTATTGAGAC TCACAGTGGA TATGATTTTC CATGGAGTCC AACAAAATAC ATCCCTTTCT ACGGTGGCGC TGAGTACCAC GATTATCATC ACTACGTTGG AGGACAAAGC CAAAGCAACT TCGCTTCGGT GTTCACTTAC TGTGATTACA TTTATGGAAC TGACAAGGGT TACCGATTCC AAAAGAAGCT TCTTGAGCAG ATCAAGGAGT CGTCTAAGAA GAGCAACAAG CATAACGGAG GAATCAAGTC CGATTAGTAG AAACCGGCGA AGAAGATTT 
Length939
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20558717.. 20560593
Download Sequence
A.thaliana
AGI-codeAT4G12110.1
Descriptionsterol-4alpha-methyl oxidase 1-1
TAIR curator summaryEncodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.
Alias[ATSMO1-1][SMO1-1][sterol-4alpha-methyl oxidase 1-1]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg486115 Protein kinase superfamily protein
5.19615 Ahg473698
18.6548 Ahg938625 exocyst complex component sec15A
18.9737 Ahg490898 Cystathionine beta-synthase (CBS) family protein
19.3649 Ahg490436
20 Ahg350148 sirtuin 2
23.0651 Ahg943542 Protein kinase superfamily protein
23.7487 Ahg496120 Ras-related small GTP-binding family protein
24.1039 Ahg475974 NAD(P)-binding Rossmann-fold superfamily protein
30.5778 Ahg945926 STRUBBELIG-receptor family 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression