| Annotation |
|---|
| Description | jgi|Araly1|946316|scaffold_702545.1 |
| Sequence |
AGTAGAGGAA GATAAGAGAA ATGGCGATGT TGGTGACGAA TTTGTCTTCT TCAAGCTTCT GTTTCTTTTC CTCTCCCCAT TTTCAAACCC ACAAAGAGCT CAGAAGCGAC GTTAGAGTTC GAAAAGATGT GATTTTTAAC AGAGCCTCGT TGAGAACAGT ATCAGATCGT GCGGATTCGA TTTCAACTTT TGATCGAAGC GTAACAGATG CGAACACTCG ATTACGGAGA TTCTGCGAAT CAGGTAATCT AAAGAACGCC GTGAAGCTTC TTCATGTATC TGGGAAATGG GATATAGATC CGAGAACTTT ATGCTCTGTT CTTCAACTCT GTGCTGATTC AAAATCTCTC AAAGATGGTA AAGAAGTTGA TAACTTTATT CGTAGTAATG GGTTTGTGTT AGATTCGAAT TTGGGATCGA AACTAGCGCT TATGTATACA AATTGTGGGG ATTTGAAAGA AGCGAGTAGA GTTTTCGATC AGGTTAAGAT CGAGAAAGCT TTGTTCTGGA ATATTTTGAT GAATGAGCTT GCAAAGTCTG GTGATTTTAG TGGGAGTATT GGATTGTTTA AGAGGATGAT GAGTTCTGGT GTTGAAATGG ATAGTTATAC TTTTTCTTGT ATTTCAAAGA GTTTTTCGTC TTTACGAAGT GTTAATGGAG GAGAACAGCT TCATGGGTAT ATTCTGAAAT CAGGTTTTGG AGAAAGGAAC TCTGTTGGGA ATTCTCTGGT GGCGTTTTAT TTGAAGAATC AGAGAGTTGA TAGTGCACGT AAGGTGTTTG ATGAAATGAC TGAGAGAGAT GTTATATCTT GGAATTCTAT TATTAATGGG TATGTATCAA ACGGATTAGC TGAGAAAGGG CTATCTGTTT TCGTGCAGAT GTTATTTTCA GGGATTGAGA TTGATTTGGC TACTATAGTT AGTGTTTTTG CTGGCTGTGC TGATTCTCGT TTGATCTCCT TAGGTAGAGC TGTCCACTGT TTTGGAGTGA AAGCTTGTTT TAGTAGAGAG GATAGGTTTT GTAATACATT GCTTGATATG TATTCGAAAT GTGGTGATCT AGACTCTGCT AAAGTTGTGT TTAGTGAGAT GAGTGGTCGA AGTGTTGTGT CGTATACTTC CATGATTGCT GGTTATGCTA GGGAAGGTTT GGCTGGTGAA GCTGTGAAGT TATTTGAAGA AATGGAGGAA GAAGGTATTA GCCCTGATGT TTATACCGTG ACTGCGGTTT TAAACTGCTG TGCCCGTAAT CGGTTGTTAG ACGAAGGCAA GCGTGTGCAT GAGTGGATAA AGGAAAGCGA TATGGGATTT GATATCTTTG TATCGAATGC TTTGATGGAT ATGTATGCGA AATGTGGAAG CATGCGAGAG GCGGAGATAG TGTTCTCTGA GATGCGTGTG AAAGATATTA TCTCGTGGAA CACCATTATT GGTGGGTACT CAAAGAATTG TTACGCCAAT GAAGCTCTAA GCCTGTTCAA TTTGCTGTTG GAGGAAAAGC GATTTAGTCC TGATGAGAGA ACAGTGGCAT GCGTTCTTCC AGCTTGTGCA AGTCTTTCTG CTTTCGATAA AGGCAGAGAG ATCCACGGTT ACATCATGAG AAACGGTTAT TTCTCAGATC GGCATGTTGC TAATTCGCTT GTAGACATGT ACGCGAAATG TGGAGCGTTG TTACTCGCAC GGTTGCTCTT TGATGATATT ACTTCCAAGG ATCTTGTTTC TTGGACAGTG ATGATAGCTG GATATGGGAT GCACGGATTT GGAAAAGAGG CGATTGCTCT TTTTAATCAA ATGAGACAAG CGGGTATTGA GCCTGACGAA ATATCTTTTG TATCTTTGTT GTATGCTTGT AGCCATTCAG GACTAGTGGA TGAAGGATGG AGATTCTTTA ACATCATGAG ACATGAATGC AAGATCGAGC CAACAGTAGA ACATTATGCC TGTATAGTCG ACATGCTTGC AAGAACCGGA AACTTGTCAA AAGCCTATAG GTTCATCGAG AACATGCCAA TTCCGCCAGA TGCTACAATC TGGGGAGCTT TGCTGTGTGG ATGCAGGATA CATCATGATG TTAAGCTAGC TGAGAGAGTC GCAGAGAAAG TCTTTGAGCT TGAACCAGAA AACACAGGAT ATTATGTACT CATGGCGAAT ATCTACGCAG AAGCTGAGAA ATGGGAAGAA GTGAAAAGGC TAAGAAAGAG GATAGGGCAA CGCGGATTGA GGAAGAATCC GGGATGTAGC TGGATAGAGA TAAAGGGTAG AGTTAACATC TTTGTTGCTG GAGATAGTTC AAATCCAGAA ACCGAAAAGA TTGAAGCTTT CTTGAGGGGG GTAAGAGCTA GAATGATAGA AGAAGGGTAT TCGCCGCTGA CTAAATACGC TTTAATCGAT GCGGAAGAGA TGGAAAAAGA AGAAGCTTTG TGTGGTCATA GTGAGAAATT AGCAATGGCT CTAGGGATTA TTAGCTCTGG ACATGGAAAG ATCATTAGAG TTACCAAGAA TCTAAGAGTT TGTGGAGATT GTCATGAAAT GGCCAAGTTC ATGTCTAAGT TAACCAGAAG AGAGATTGTC CTAAGAGATT CAAACCGGTT TCACCAATTT AAAGATGGAC ATTGTTCTTG CAGAGGTTTT TGGTGAACAT TGAACTGTTT CATGTAAT |
| Length | 2658 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9926083.. 9928737 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G18750.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons. |
| Alias | [DOT4][DEFECTIVELY ORGANIZED TRIBUTARIES 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg489954 | Translation initiation factor 2, small GTP-binding protein |
| 4.47214 |
Ahg915270 | Homeodomain-like superfamily protein |
| 6.7082 |
Ahg481406 | DNAJ heat shock N-terminal domain-containing protein |
| 9.94987 |
Ahg311551 | lipoyltransferase 2 |
| 10.2956 |
Ahg908083 | Zinc finger (C3HC4-type RING finger) family protein |
| 11.4018 |
Ahg323555 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 14.4914 |
Ahg929843 | |
| 15.8745 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 17.6635 |
Ahg941263 | phosphoglucosamine mutase family protein |
| 18.412 |
Ahg479498 | Protein of unknown function (DUF177) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|