Detail



ID : Ahg946318

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946318|scaffold_702547.1
Sequence
TTTACTCATC TCCTTCGATT TCGAACTCCT AATCTTGAGA TGGCGTCGGA GAAGAAGCTC TCGAACCCTA TGAGGGATAT TAAGGTTCAG AAGCTAGTTC TTAACATCTC TGTTGGTGAG AGTGGTGATC GTCTCACTCG TGCCTCCAAG GTGTTGGAAC AGCTCAGTGG TCAAACCCCT GTCTTCTCTA AGGCGAGGTA CACTGTGAGG TCTTTTGGTA TCAGGCGTAA TGAAAAGATT GCGTGCTATG TCACCGTGAG AGGTGAGAAG GCAATGCAGC TTCTTGAGAG TGGCTTGAAA GTGAAGGAAT ACGAGCTGTT GAGGAGGAAC TTCAGTGACA CTGGCTGCTT TGGATTCGGT ATCCAGGAGC ACATTGATCT TGGAATCAAG TATGATCCTT CTACCGGTAT CTACGGTATG GATTTCTACG TTGTTCTTGA ACGCCCGGGA TACCGTGTTG CCCGTCGCCG TAGATGCAAG GCTCGTGTTG GTATTCAACA TAGAGTTACC AAGGATGATG CCATGAAGTG GTTCCAAGTT AAGTATGAAG GAGTTATCCT CAACAAGTCT CAGAACATCA CTGGTTGAAG AGTTTTTTTC ATTTTGTT 
Length608
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9930303.. 9931356
Download Sequence
A.thaliana
AGI-codeAT4G18730.1
Descriptionribosomal protein L16B
TAIR curator summaryencodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root and shoot apical meristems and in lateral root primordia. Expression in lateral root primordia is induced by auxin.
Alias[RPL16B][ribosomal protein L16B]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg938244 Ribosomal protein L11 family protein
8.83176 Ahg941581 Ribosomal protein S8e family protein
9.16515 Ahg470810 ribosomal protein S15A
11.3137 Ahg482470 AICARFT/IMPCHase bienzyme family protein
11.7473 Ahg473492 Ribosomal protein L6 family
12.4499 Ahg483125 Nucleic acid-binding, OB-fold-like protein
13.4164 Ahg485677 Ribosomal protein L24e family protein
15.748 Ahg487866 Ribosomal protein S6e
16.1245 Ahg321902 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
18.9737 Ahg487072 Ribosomal protein S12/S23 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression