Detail



ID : Ahg485677

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485677|fgenesh2_kg.5__1669__AT3G53020.1
Sequence
ACAGAGCTTT GTCGTTTCAG TGGCCAGAAG ATTTACCCAG GAAGAGGAAT TAGGTTTATC CGATCTGATT CTCAGGTTTT CTTGTTTGCT AACTCAAAGT GTAAGAGGTA CTTCCATAAC AAGTTGAAGC CATCCAAGCT TACATGGACT GCCATGTACA GAAAGCAACA CAAGAAGGAT GCAGCGCAAG AGGCTGTGAA GAGAAGGAGA CGTGCCACCA AGAAGCCATA CTCAAGGTCC ATTGTTGGTG CTACCTTGGA GGTGATTCAG AAGAAGAGAG CTGAGAAGCC TGAAGTTCGT GATGCTGCCA GAGAAGCTGC TCTGCGTGAG ATCAAGGAAA GAATTAAAAA GACCAAAGAT GAAAAGAAGG CTAAGAAGGT GGAATTTGCT TCTAAGCAAC AGAAGGTGAA GGCTAATTTC CCCAAAGCTG CTGCTGCATC CAAGGGTCCT AAGTTGGGAG GTGGTGGTGG CAAACGCTGA AGAGCTTAAG CCATATTTTC TCACTTTGTG TCTTTCTCTG CTAGTGGCTA CTTTTACTAG TTAATGTTGA TTTCTGAATA TTCTGCAAAA CGTAAACCTT GTTATTTCGC TTTTGTCTCT TACTTTTGCT ACTCTTATAA TATCAGACTT GAGAATTTTG CTGCTTATGA ACTTCATTTC GCTGCTCTCT CTTTTCCTCT TATTATTAAA ATCAA 
Length695
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15514195.. 15515200
Download Sequence
A.thaliana
AGI-codeAT3G53020.1
DescriptionRibosomal protein L24e family protein
TAIR curator summaryRPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20.
Alias[RPL24][RPL24B][STV1][RIBOSOMAL PROTEIN L24][SHORT VALVE1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg341089 Tetratricopeptide repeat (TPR)-like superfamily protein
3 Ahg941581 Ribosomal protein S8e family protein
4 Ahg488362 Ribosomal protein S4
6.63325 Ahg493205 Ribosomal protein L23/L15e family protein
7.74597 Ahg495762 Ribosomal protein L31e family protein
8.94427 Ahg478490 Ribosomal protein S11 family protein
9.79796 Ahg482410 Ribosomal protein L18ae/LX family protein
13.0384 Ahg473757 ribosomal protein 1
13.2665 Ahg939059 Zinc-binding ribosomal protein family protein
13.4164 Ahg946318 ribosomal protein L16B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression