Detail



ID : Ahg946853

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946853|scaffold_703082.1
Sequence
GTAAATCTTC ATCTTCAACA ATGAAAAGGA GGAATAAGTC ATCTCAACTC TTTTCTTTGC TCTGTATCTT GCTGCAACAC ATTTCTAATC TTGTTGGTAA CCCAAAGATT GTGCTCCCAG TTCCTGCCTT CAATGTAATC AACGGTGGAT CTCATGCAGG AAACAAACTT GCAATGCAGG AGTTCATGAT TCTCCCTGTT GGAGCTTCAT CTTTCAAGGA AGCCATGAAA ATGGGTGACT TTGCACCAAA CATTCAGGAG AACAAAGAAG GTCTAGAACT GCTTAAGACT GCCATTGAGA AGGCCGGATA CACTGGCAAG GTTGTCATTG GAATGGATGT CGCTGCGTCT GAGTTCTACT CATCAGACAA GAAATACGAC TTGAACTTCA AAGAAGAGAA CAACGATGGT TCTCAAAAGA TCTCTGGAGA TGCTCTCAAG GACTTGTACA AGTCATTCGT TTCAGAGTAC CCTAATGTAT CCATTGAAGA CCCATTTGAC CAAGATGACT GGGAGAACTA TGTTGAAATG ACCGTTGAAT GTGGCGAGAA AGTTCAAATC GTCGGTGATG ATTTGCTGGT CACCAACCCC AAGAGAGTTG AGAAGGCAAT CAATGAAATG TCTTGCAATG CTGTTCTATT GAAGAGTATC GAGGCAGTTA AGATGTCAAA GAGAGCTGGT TGGGGATTGA TGGCTAGCCA CCATAGTGGA GACACTGAGG ACACATTCAT TGCTGACTTA TCTGTCGGTT TGTCAACCGA CAAATCAAGA CCGGAGCTCC TTGCAGATCA GAGCGTCTTG CCAAATACAA TCAGTTCCAA TCCAGATCAT GATCCAACAC CAGGGGTTGG AAAGAGTGCA TGGTCAGAGC TGCAGTCTCT GTGTACTTCG ATTGAAATCT TGAATAGCCT TAATTTAAAC AATCACTGGA TGAAAGAGTT TTTTTCTTGG CAATGCGTAT CAAGAACTCA GAATGCACAC TGGGTCTTTG GCGAAGTACG AGTATTTGCA AGGGAATTTG ACCACGTTGA AATCATGTTT AGAGAACATC TGAGAAACGA TCCCTATCGG ATGGAAGATA TGGATTTGTA TTCTTATGTT CTGTATGCAA AAGAAGCATG TGCTGCGCTG AGTTACCTTG CACATAAGGT GGTTTTGACT GATAAGTACA GACCTGAGTC TTGCTGCATC ATTGGCAACT ACTACAATTT AAAAGGCCAG CATGAGAAAG CAGTTATTTA CTTCCGGAGA GCTTTAAAAC TGAACAAGTA TTTATCGGCG TGGACTCTTA TGGGCCATGA ATATGTTGAG ATGAAGAACA CGCATGCTGC CATTGATGCA TATCGACGAG CTGTTGATAT AAACCCTTGT GATTATCGAA CTTGGTATGG GTTAGGACAA GCATATGAGA TGATGGGGAT GCCTTTCTAT GCACTTTACT ATTTTCGCAA ATCCATATTC TTTCTTCCAA ACGATTCTCG GTTGTGGATA GCCATGGCTA AATGTTATCA AACCGAACAG CTTTACATGC TTGAAGAGGA ATATCACTTA ATCAAGCTTC ACCAGAAGCT TGGACGTAAT GAAGAAGCTG CATTTTATTT CGAGAAGGAT TTAGAGAGAA TGGATGCTGA AGGATTAGAA GGACCAAACA AGTTTGAGGC TTTAATTTTT CTTGCCACAC ATTTTAAAAC TCACAAGAAA TTCGCAGAAG CAGAAGTGTA TTGCACCCGT CTTCTCGATT ATAGTGGACA TTGTTCTTTT GCTTTTGCTT ATCTCTCTCT TGATTTTTTC TTTGTATTTC TCCTGAATAT ATATATAGAT AAGCGCACAA AAACATGGAA AAAAGGCCAG AAAGACCGAG AGGTATAAAG ATGAGATGAC CACTACAAT 
Length1889
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8196583.. 8200167
Download Sequence
A.thaliana
AGI-codeAT3G48150.1
Descriptionanaphase-promoting complex subunit 8
TAIR curator summaryanaphase-promoting complex or cyclosome subunit
Alias[APC8][CDC23][anaphase-promoting complex subunit 8]
Gene coexpression
MR
MR Locus Description
4.12311 Virus1613
4.89898 Virus0366
5.65685 Ahg949680 Prolyl oligopeptidase family protein
5.83095 Virus3719
9.21954 Virus1635
9.94987 Ahg935354
10.9545 Ahg891034 histone H2A 4
11.6619 Virus1574
12 Virus3754
12.9615 Ahg887772 Adenine nucleotide alpha hydrolases-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression