Detail



ID : Ahg946999

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946999|scaffold_703228.1
Sequence
TAGTGAAATC GAACCCTGTC ATGGATCTTT CTCCAGTGAA GGAAGCTTTG GCCGTTAAAT CCTTTGATAA AATCGCTGAA ATCTGCGATA ATCTCATGCT TCAGGTTGCT TCCGAAGGAA TTGATTATCA TGATGATTGG CCTTACGCAA TCCATCTTCT GGGTTACTTT TACGTCGACG ATTGTGATAG TGCCCGTTTT CTCTGGAAAA CGATACCTAC AGCTATCAAG GAGAGGAAGC CTGAAGTTGT TGCAGCTTGG AAGATTGGTC AGAAGCTGTG GACACACGAC TATGCAGGTG TATATGGAGC TATTCGGGGT TATGATTGGA GTCAAGAAGC TAAAGAGATG GTTGCTGCCT TCTCAGATCT TTACACAAAA AGGATGTTTC AGCTTTTGTT GTCTGCCTAC TCCACAATTA CCATTCATGA TTTAGCTCTA TTCCTTGGGA TGACGGAGGA TGATGCCACA ACTTATGTTG TAGAGAATGG ATGGACAGTG GATGCAACTT CTCAAATGGT GACTGTGAAG AAAGAAGCTG TTAAAAGAGA GCAAAAGGTG GATTCATCGA AGCTGCAACG CTTGACGGAG TATGTGTTCC ACCTTGAACA TTAGAACAAA GGACCAGTCT CCTAT 
Length635
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13435048.. 13436800
Download Sequence
A.thaliana
AGI-codeAT4G14110.1
DescriptionCOP9 signalosome, subunit CSN8
TAIR curator summaryRepresses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.
Alias[COP9][CSN8][EMB143][FUS7][CONSTITUTIVE PHOTOMORPHOGENIC 9][COP9 SIGNALOSOME SUBUNIT 8][EMBRYO DEFECTIVE 143][FUSCA 7]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg478555 Protein of unknown function DUF106, transmembrane
10.198 Ahg470500 dentin sialophosphoprotein-related
15.4919 Ahg476195 MMS ZWEI homologue 2
18.412 Ahg321074 RNA-binding (RRM/RBD/RNP motifs) family protein
18.7617 Ahg491042
29.5973 Ahg948944 Thioredoxin superfamily protein
32.8634 Ahg929316 3-hydroxyacyl-CoA dehydrogenase family protein
34.1467 Ahg488714 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
39.7995 Ahg480185 Ubiquitin-like superfamily protein
46.744 Ahg487615 conserved peptide upstream open reading frame 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression