| Annotation |
|---|
| Description | jgi|Araly1|487615|fgenesh2_kg.6__749__AT5G07840.1 |
| Sequence |
CTCTGATCTC TTTACCCATT GATCCAGGCT TTTTCTGATT TCTCTTAGTT CCTAGAAACC ATTAGGCTCC TATTCTTTTC AAGTTGATGC TTGTTTTCTC TTCACTGTCT ATGACTCCAA TTGTGATCCC TCAAAATCTC CGTGTCTTTG GCCCTGGTTT GAATCCCTCT TTCCCTTACT GCATTTCTAA TCACTCCCCT TGATTTTAGT TGCTTCATTT CAACTGAATC ATCTATGCTC CAAGAGCAGC CAGTTGCATT GTCCTTCCGG CGTAACTCAT TTAGACGCCG GTCCATGAAA ACGGGTGTTG ACAGAGACGA TAGGGGCTGG ACTCAGCTCC ACATCAAAGC TTGTAAAGGC GATCTCAAAG CTGTTAAAGA GCTCCTTGAC CAAGGAGCTG ACGTGAACGC TTTAGCGTGT GGACCTAAAT CAAAAGGAAT GACTCCTCTT CACCTTGCAG CCAAAGGAGG TCACATTGAA GTCATGGACT TGCTTCTTGA ACATGGAGCC AATATTGAAG CTAGAACCTC GGGTGCTTGT GGCTGGACTC CTCTCCATGC TGCAGCTAAA GAACGGAAGA GAGAAGCTGT CAAGTTTCTT GTGGAGAACG GAGCTTTCTT ACCCGATGAT ATAACCGACT GTAGATTCAA CCCGCCGGTT CAGTACTGTC ACGGCTTGGA ATGGGCTTAC GAGGAGAGGA AGAAACTCAG TGGAGAGACT TCTT |
| Length | 724 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2938667.. 2939600 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G07842.1 |
| Description | conserved peptide upstream open reading frame 16 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF16 represents a conserved upstream opening reading frame relative to major ORF AT5G07840.1 |
| Alias | [CPuORF16][conserved peptide upstream open reading frame 16] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.6886 |
Ahg934690 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
| 15.2971 |
Ahg488545 | binding partner of acd11 1 |
| 18.0831 |
Ahg920006 | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
| 18.735 |
Ahg925133 | ZCW7 |
| 19.799 |
Ahg490695 | NmrA-like negative transcriptional regulator family protein |
| 20.3715 |
Ahg477706 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 21.4243 |
Ahg473195 | double-stranded DNA-binding family protein |
| 22.2261 |
Ahg325480 | vacuolar protein sorting-associated protein 20.2 |
| 22.6274 |
Ahg941053 | Mitochondrial substrate carrier family protein |
| 30.1496 |
Ahg349525 | NAD(P)-binding Rossmann-fold superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|