Detail



ID : Ahg947558

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947558|scaffold_703787.1
Sequence
ACAAGGTTTA GTCTGCAAGA ATGGCTACTA ATTCTACCAA AGCTTGTCCT GCTCCGATGA AAGCAACCTC TAATGGAGTT TTCCAAGGAG ATAACCCTAT AGACTTTGCG TTACCTCTTG CGATTCTGCA GATAGTCATT GTTATTGTTC TCACTCGTGT TCTTGCTTAC ATTTTAAGAC CTTTGAGGCA GCCTCGTGTT ATTGCTGAAG TTATTGGTGG GATTATGCTT GGACCTTCTC TTCTTGGTCG TTCCAAGGTC TTTCTTGACG CTGTGTTCCC GAAGAAAAGT TTGACTGTTC TAGAAACTTT GGCTAATCTC GGCCTTCTCT TCTTCCTGTT CCTTGCCGGT CTAGAGATTG ATACCAAAGC CCTTCGTCAC ACCGGGAAAA AGGCTTTGGG AATTGCCCTG GCTGGAATAA CCCTCCCGTT TGCTCTTGGC ATTGGTACTT CATTCGTTTT AAAGGCAACA ATCTCCAAAG GAGTGGATAG TACTGCGTTT CTCGTCTTCA TGGGTGTGGC ACTCTCCATC ACTGCATTCC CTGTGTTGGC CCGTATCTTA GCTGAGCTAA AGCTTCTAAC TACTGAAATA GGACGACTTG CTATGTCCGC AGCTGCTGTT AACGATGTGG CAGCTTGGAT TCTCCTTGCT CTAGCCATCG CTCTCTCGGG ATCCAATACC TCTCCCCTTG TCTCTCTCTG GGTTTTCCTT TCCGGTTGCG CTTTTGTCAT CGGTGCTGCT TTCATCATTC CGCCAATATT TAGATGGATT GCCCGGAGGT GCCACGAGGG AGAACCTATC GAAGAAACCT ACATCTGTGC CACTTTGGCT GTAGTTCTTG TTTGTGGATT CATTACTGAT GCCATTGGAA TCCATTCCAT GTTTGGTGCC TTTGTGGTGG GTGTTTTGAT CCCAAAGGAA GGACCTTTTG CTGGTGCACT CGTTGAGAAG GTGGAAGATC TTGTATCCGG TCTCTTCCTG CCGCTTTACT TTGTGGCAAG TGGTCTGAAA ACTAATGTGG CCACGATTCA AGGAGCTCAG TCTTGGGGTC TTCTGGTTTT AGTCACCGCC ACAGCTTGTT TCGGTAAGAT ATTGGGCACT CTCGGTGTTT CCCTCGCCTT CAAGATACCT ATGCGAGAAG CAATAACATT AGGATTCCTC ATGAACACTA AGGGATTGGT CGAACTCATC GTCCTCAACA TCGGAAAAGA TCGAAAGGTT CTTAATGATC AGACATTTGC CATAATGGTT CTAATGGCTC TGTTCACAAC CTTCATCACC ACACCAGTCG TAATGGCAGT CTACAAACCG GCTAGAAGAG CAAAGAAAGA AGGAGAATAC AAACACAGGA CGGTAGAACG AGAGAACACA AACTCACAGC TTCGAATCCT CACATGTTTC CATGGCGCCG GAAGCATTCC TTCAATGATA AACCTCCTCG AAGCATCAAG AGGCATCGAA AAAGGCGAAG GACTGTGCGT ATACGCTCTC CACTTACGAG AACTATCAGA GAGATCATCA GCTATTCTAA TGGTTCATAA AGTTCGCAAA AACGGAATGC CATTTTGGAA CCGCAGAGGT GTCAACGCAC ACGCAGATCA AGTAGTAGTT GCTTTCCAAG CTTTTCAACA ACTAAGCAGA GTCAATATCC GACCAATGAC AGCAATCTCT TCAATGTCTG ATATTCATGA AGATATCTGC ACAACAGCTG CAAGAAAAAA AGCTGCCATT GTGATTCTTC CGTTTCACAA GCATCAACAG CTCGATGGTT CGTTAGAGAC TACACGTGGC GATTACCGTT GGGTTAACCG GAGAGTTTTG CTTGAAGCTC CTTGTTCAGT TGGTATATTC GTTGACCGTG GACTCGGTGG TTCGAGTCAA GTCTCAGCTC AAGATGTTTC TTACTCTGTT GTTGTTCTGT TCTTCGGTGG TCGTGATGAT CGTGAAGCAT TGGCTTATGG ATTACGTATG GCGGAGCATC CCGGAATTAC TTTGACGGTT TTCCGATTTG TGGTATCGCC GGAGAGAGTC GGAGAGATTG TTAACGTTGA AGTGAGTAAC ACTAACAACG AGAGTCAGAG TGTGAAGAAT CTGAAATCGG ATGAGGAGAT TATATCTGAG ATAAAGAAGA TATCGTCGGT GGAGGAATCG GTTAAGTTCG TGGAGAAACG GATTGAAAAC GCCGCCGCGG ATGTTAGATC GGCGATTGAG GAAGTACGGC GGAGCAATTT GTTTTTGGTT GGTCGAATGC CAGGTGGCGA AATAGCATTG GCGATTAGGG AAAACAGTGA ATGTCCGGAG CTTGGACCTG TCGGAAGTTT ATTGATTTCG CCGGAATCTT CGACAAAAGC ATCGGTTTTG GTGATTCAGC AGTATAACGG CACCGGAACA GCTCCGGATT TGGCTTCAGC TGGGACGGAG GTATTGACTT CAACGGATAA AGACTCTGAT TGAGTCCATT GGTTAACAAG AACGGT 
Length2476
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20171169.. 20173795
Download Sequence
A.thaliana
AGI-codeAT5G41610.1
Descriptioncation/H+ exchanger 18
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX18][CHX18][ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18][cation/H+ exchanger 18]
Gene coexpression
MR
MR Locus Description
47.4658 Ahg351609 Protein of Unknown Function (DUF239)
52.6783 Ahg470069 squamosa promoter binding protein-like 8
63.1348 Ahg481664 transposable element gene
65.2074 Ahg479218 glyoxysomal protein kinase 1
75.591 Ahg940104 Protein of unknown function (DUF620)
87.6584 Ahg357417 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression