Detail



ID : Ahg947602

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947602|scaffold_703831.1
Sequence
TTTCGTCTGG GATTGCGTTA ATGGCGATGA GATTTCTTCA TCTTCACCGA GATCTTGTAA AAGGTAATTC TGGGAAAGCT CTCTCCTTTA GCCGCCTTTT AGGTCTTAGT TTCTGGGTTC GAGCTTTTTG TAATTACCGA GAGATTTTGA GAAATGGACT TCACTCTCTT CAGTTTAATG AAGCTCTTGA TTTGTTCAGT CACATGGTTG AGTCTCGTCC TCTTCCTTCA ATTATCGATT TCACTAGATT ATTGAATGTT ATTGCCAAAA TGAAGAAGTT TGATGTTGTG ATCAATCTGT GCAAGCATTT GCAAATAATG GGAGTTTCGA ATGATCTCTA TACTTGTAAT CTTTTGATGA ATTGTTTCTG TCAATCTTCT CAGCCTTGTC TTGCTTCTTC TTTTCTTGGG AAGCTGATGA AACTTGGTTT TGAGCCTGAC ATTTTCACGT TTACTTCTCT GATCAATGGG TTCTGTCTCG GGAATAGAAT TGAGGAGGCC ATGTCTATGG TGAATCAGAT GGTGGAGATG GGGATTAAAC CCGATGTTGT AATGTATACA ACAATCATCG ATAGTCTTTG TAAAAACGGA CATGTGGATA ACGCGTTGAG CCTTTTCAAT CAAATGGAAA ACTATGGGAT TAGACCGGAT GTTGTTATGT ACACCTCTCT CGTCATCGGT CTTTGTAACT CTGGTAGATG GAGAGATGCT GATCCATTGC TCAGGGGTAT GATGAAGAGG AAAATCAAAG CTGATGTAAT CACTTTCAAT GCATTGATCG ATGCGTTTGT GAAAGAAGGA AAGCTTTTGG ATGCTAAAGA ATTGTACAAT GAGATGATTC GAATGTCTAT AGCTCCTAAT ATTTTCACTT ATACTTCATT GATCAATGGG CTTTGCATGG AGGGTCGCTT AGATGAGGCC AGACAAATGT TTCATTTGAT GGAAACCAAG GGTTGTTTTC CAGACGTAGT GGCTTATACC TCTCTCATAA ATGGGTTTTA CAAGTGTAAG AAGGTAGAGG ATGCGATGAA AATCTTCTAC GAGATGTCCC AAAAAGGATT GACTGGGAAC ACAATCACTT ACACTACTCT TATCCAAGGT TTTGGTCTAG TGGGCAAACC TAATGTCGCC CAAGAAGTTT TCAGTCATAT GGTTTCTCGT GGCGTGCCTC CCAATATTAG GACTTACAAT GTATTGTTAC ATTGTCTATG TTATAACGGG AAGGTAAAGA AAGCGTTGAT GATATTTGAG GATATGCAAA AGAGAGAAAT AGATGGTGTG CCTCCCAATA TTAGGACTTA CAATGTATTG TTACATTGTC TATGTTATAA TGGGAAGCTA GAGAAAGTGT TGATGGTGTT CGAGGATATG CAAAAGAGAG ATATGGATAT TGGTATTATT ACATATACAA TCATCATTCA AGGGATGTGC AAGGCCGGTA AAGTGAAAGA TGCTCTTAAT TTATTTTGTA GCCTCCCTTC CAAAGGAGTG AAGCCAAATG TTGTAACATA CACTACAATG ATATCAGGAT TGTTTAGGGA AGGGTTAATG CTTGAAGCTC ATGTGTTGTT TAGAAAAATG AAAGAAGATG GGGTTTCATA ATTAGGTGAC ACTATAGCAT A 
Length1621
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20416058.. 20417682
Download Sequence
A.thaliana
AGI-codeAT5G41170.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.98 Ahg943308 glycosyltransferase family protein 28
26.7208 Ahg470187 Divalent ion symporter
44.0227 Ahg897242 Protein of unknown function (DUF626)
49.0714 Ahg893702 Sodium/calcium exchanger family protein
53.4977 Ahg897001 Cofactor-independent phosphoglycerate mutase
65.7191 Ahg489370 cytochrome P450, family 71, subfamily B, polypeptide 14
78.1025 Ahg475557 photosystem II reaction center protein H
78.1025 Ahg475609 photosystem II reaction center protein H
82.7526 Ahg913052 pentatricopeptide (PPR) repeat-containing protein
84.2496 Ahg490488 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression