Detail



ID : Ahg949003

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949003|scaffold_800890.1
Sequence
CTTAGATTTG ACTTTTAATT ATGTTTCTTA TACAGCCTTT AATCAGTTGC AAAGAAACGT CATGCATACT GTGGAAAAAT TCTACATGTT CTACTGAGCT TGAATCCCCT AAGCTTTCTC AAGGAGTGCA TGCTGCAGCA GCAAATCTTG CCTTGAAGAC TATATTTCTC TCATGCTTGA AATGTACACA TCCCACTGCC CGAAAAATTA AAACCCTTTG CAATTTTCTG TATGTTGTCA ATTTTCTCCA GTGGAAGGAC CGGTTGATCA GTGCTCCTAA AGAGATAGAA GGTGGAGGTC GGGCAGCCAA AGCAAAAGAT CTCTTTTACA AGACTAACGG AAGCACTCAA GATAAAGACA GTGTAGAGGA TACCAAGGTG AAGGAGGAGC ACGATCATGA AAGGTTATTT CTATGATTTC TAAGTATCTC TTAAAA 
Length436
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5801294.. 5801729
Download Sequence
A.thaliana
AGI-codeAT5G01400.1
DescriptionHEAT repeat-containing protein
TAIR curator summaryEncodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.
Alias[ESP4][ENHANCED SILENCING PHENOTYPE 4]
Gene coexpression
MR
MR Locus Description
1 Ahg947120 HEAT repeat-containing protein
30.7409 Ahg478461 Paxneb protein-related
35.7911 Ahg899104 Tetratricopeptide repeat (TPR)-like superfamily protein
58.8048 Ahg496141
64.8383 Ahg897258 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression