Detail



ID : Ahg949372

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949372|scaffold_801259.1
Sequence
CGAAGAAGAA GACGACGAAG ATGGATTACC AGAACAAGCT TGTTCTTGCT CCCATGGTTC GTGTGGGAAC GCTCTCTTTC AGGATGTTGG CGGCCGAATA CGGCGCCGAT ATCACATACG GTGAAGAGAT TATCGATCAT AAGCTTGTTA AATGCGAACG TCGAATTAAC GTTGCTTATG GGACAACTGA GTTTGTGGAG AAAGGAACAG ACAATGTCGT CTTTAGCACA TGTAAAGAAG AGAGAAATAG AGTTGTTTTT CAAATGGGAA CTTCTGATGC TGTTAGGGCT CTAAAAGCTG CTGAGATTGT GTGCAACGAC GTTGCAACTG TTGATATTAA TATGGGTTGC CCCAAGGCGT TCTCTATTCA AGGAGGAATG GGTGCTGCTT TGTTAAGTAA ACCCGAACTT ATTCATGATC CCATCAAAAA GTCTTCGAAT TTTTCGTGGC TGCGTACACT ACCTCCTGTT ATCACTTTTC AGCTCAAACG ATGCATTTTC CTTCCTAAGA CAACGGCTAA GAAGAAAATC ACCTCCTCAT TTTCCTTTCC TCAAGTGCTA GATATGGGAT CGAGATTGGC AGAATCTTCT CAAAACAAGT TGACATACGA TCTCTCTGCT GTGTTAATCC ACAAAGGAAG CGCTGTTAAC AGCGGACATT ATGTTGCTCA CATAAAAGAT GAAAAGACTG GCTTGTGGTG GGAATTTGAT GATGAACATG TGTCAGAACT GGGTAAATGT CCATTCAATG AAGCTTCTTC TTCAACTCCA CAATCTGAGA GTAATGGTAC AGCTAGTAGT GAGAATATCA CAGATGTCAT TCAATCAGGC TCTTCAGACT GTAGGTCTGC TATTAAGTCA GAGGTTTTCT CATCCAGTGA TGCTTATATG CTGATGTATA GTCTTAGATG CGATAAACAG GAAAATCAGG AAGGACAGAA AGAAAATCCT ATTGACATAT CTAAAGGAAA AGTTGATAGT CTTCAACAGC TTAAAGGTGG TTATCTTCCG TTACATCTTT ATGAATGGAT CAATAATATG AATGCAGTAT TCCTTGAGAG TTGCAAGCAA TATGATTTAA GAAAGGAAAA AGAATTGAGT GCTTTGACTG AAAGGAGGCA AGAAGTACGG ACTATCCTTT CAGAAGCTGC TGTTCAGTCA CTTGAAGAAC AATATTTTTG GATCTCCACA GATTGGCTTC GTCTATGGGC TGATACCACT TTGCCTCCCG CTTTGGACAA CACCCCTTTA CTGTGTTCCC ATGGGAAAGT TCTTGCCTCA AAAGTAAATT GCATGAAGCT GATATCTGAA CTTGCATGGA CCAAGTTAGA ATCAAAGGAA AAGCGGACTA CTGCAGGGAC TGCCTTATGG GATGGTGCTC GCATGGTTGT CTCTTCTGAC AGTTATAGGG ATCGAAGAAC ATTCATGAAA AGCGTAGCAA ATGATGTTCT TTCGGGAAAG TGTGAGGACG GAATGTATTA TATCTCTAGA GCATGGTTGC AGCAATGGAT AAAAAGGAAA AATCTTGATG CTCCTACTGA AGCAGATGCG GGGCCCACAA ATGCTATTAC GTGCAATCAT GGAGAGCTGA TGCCAGAGCA AGCACCAGGG GCCAAAAGAA TTGTAGTTCC AGAGAATTTC TGGTCATTCC TTGTTGAAGA TGCTCTAAAA GTGATGCCAG AAGATGCTTC GGATTGTACT TGTTTCCCTG TGGACTCCAG CCAATGTTGT CATTGCACAG AGGAACTTTC TGAGGTTGCA TGCCTTGAGG ATTCACTAAG AACATTGAAG GTCAAGCAGC GCCAAAATCA CGAGAAGTTA GCCACGGGAA AGAATATACC ATTTACGCCA CAAAGCCGAT ATTTCTTGTT GCCTTCTCCG TGGCTAGTGC AATGGAGAAT CTATATTAAC ATGACTGGAA AAAATAGTTC TTCAGCACCA GAGCCTGAAC GTCTTGATGG AGTCATTAAT ACTCTCAAAT GCAAAAAGCA CACACGACTC CTTGAAAGGC TCCCTGAACT TGTCTGCAGA CGTGGCTCGT ATTTTCAGAA AAATCCATCT ACAGACAAGC TGACAATCAT CCCTGAGATT GATTGGAAAT ATTTCTGTGA GGAGTGGGGA GGACTCATGG AGAATGGAAT ATCTGCTCTT ATTGAGGTTG GTAACAATAC AGACCAAAGT TCATCCCCAG ACATCATTGA CCTTGAGAAG CATTCTTCTC CGGATGATAA TATGGAGGTT GATGCTCAAC AGCTTATTCT CAGGGCATCT CCAGAGGTAT TTGCATTATT ATCTTGAGCC CTTATTTTTG GTCAACATCT 
Length2320
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11840607.. 11845289
Download Sequence
A.thaliana
AGI-codeAT3G49600.1
Descriptionubiquitin-specific protease 26
TAIR curator summaryEncodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Alias[ATUBP26][SUP32][UBP26][ubiquitin-specific protease 26]
Gene coexpression
MR
MR Locus Description
36.9865 Virus0803
39.598 Ahg930924 LOV KELCH protein 2
49.1223 Ahg945865
50.1199 Ahg474040 C3HC zinc finger-like
65.7115 Ahg488138 jasmonate-zim-domain protein 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression