| Annotation |
|---|
| Description | jgi|Araly1|949551|scaffold_801438.1 |
| Sequence |
TAGAAAGTGG AAGCTGAGCC ATGTCCATAG CGTCGTCTTC TTCTCTTGCG ACCCAATCCT TTTATACTTC ATTTCCTTTA TCTCACCGAC ATCACCTCCC TGAACCTTAT CTTCTTCTTC GCTCTTCACT TTATCGAAAA CCCATTCTTT GTCTCTCTGC TACTTCTTCC CCTTCGTCAT CTTCTTCTTC TTCCATTTTC CTCTCCTGCT TCGATGACCC TTTACCAGGT AAGATTCAAC AACCAGAAAT TTCGACAAAT ATTAACCAAA AAGATGAAGA TGAAGAAGAA GAAGAAGGAG ATGATTTCAC AGACCCAATT CTTAAATTCT TCAAGTCACG AACTTTAACA TCGGAATTGA CCCAAGACCC AGGTCGAGAA TCCAAATTCT CCCTCCAGAA GAGTCGTCGA ACCTCTTGGC ACTTGGCTTC AGACTTCGCT GACCCCGGAA CTGAGATTGA GTCCGAGCCT GAGGAATCCG TCTCTGTGGC AAATCAACAA ACACTTGGTG TGCACACTTC TTTCGAAAGT AGCATCGCTG GGGAAATACT TGAAATTGCT AAGAGTCTTA CAGAGAATCA AACTCTGGGA GAGATGTTAT CAGGTTTCGA CAGAAGGGTT AGCGAAACAG AGTGTGTAGA GGCATTGGTG ATGATGGGTG AATTTGGTTT TGTAAAGACT TGTTTGTATT TCTATGAGTG GATGAGTTTG CAAGAACCTT CCCTTGCTTC GCCTCGTGCT TGCTCTGTGT TGTTTACATT GCTCGGTAGA GAAAGAATGG CTGATTATAT TCTGCTTCTG CTAAGTAATT TACCAGACAA GGAAGAGTTC AGAGATGTTC GTCTCTATAA TGCCGCCATT TCTGGGTTAT CAGCTTCTCA AAGGTATGAT GATGCTTGGG AAGTGTATGA AGCTATGAAT AAGATCAATG TGTTTCCGGA TAATGTTACA TGTGCTATTA TGATAACAAC CATGAGGAAG GCAGGACGAA GTGCGAAAGA AGTTTGGGAG ATATTCGAGA AGATGAGCGA GAAAGGTGTG AAGTGGAGTC AGGATGTTTT CGGTAGCCTT GTGAAATCGT TTTGTGACGA AGGGTTGAAA GAAGAAGCTC TTGTAATTCA AACAGAGATG GAGAAGAAAG GTATCCGTTC AAACACGATT GTGTATAATA CGTTGATGGA TGCTTATAAT AAATCCAACC ACATAGAAGA AGTGGAAGGT CTTTTTGCTG AAATGAAAGC TAAAGGCTTG AAGCCTACAG CTGCGACTTA TAACATTCTT ATGGATGCTT ATGCTAGAAG GATGCAGCCT GATATTGTAG AGACATTTCT GCGGGAGATG GAGGATTTAG GTTTAGAGCC AAATGTGAAA TCGTACACGT GTTTGATTAG TGCGTATGGG AGGACGAAGA AGATGAGTGA TATGGCTGCT GATGCTTTCC TGCGGATGAA AAAAGTAGGT TTGAAACCTT CTTCACATTC TTATACAGCT CTTATTCATG CTTACTCGGT TAGTGGGTGG CACGAAAAAG CTTATGCTTC CTTTGAAGAG ATGTGGATGG AGGGGATCAA ACCATCGGTT GAAACATACA CATCACTTCT CGATGCATTC AGACGATCTG GTGACACTGA AAAGCTGATG GAAATTTGGA AACTAATGTT GAGAGAAAAA ATCAAAGGGA CACGGATAAC ATATAACACT CTTCTCGATG GGTTTGCCAA GCAAGGACTC TACATTGAAG CAAGGGATGT TGTTTCTGAG TTTGGTAAAA TGGGTTTGCA GCCAAGTGTT ATGACTTACA ATATGCTGAT GAATGCCTAC GCACGGGGAG GACAAGATGC GAAATTGCCA CAGCTGTTGA AGGAAATGGC TGCTCTTAAC ATAAAACCTG ATTCCATCAC ATATTCAACC ATGATCTACG CGTTTGTTCG TGTTAGAGAC TTCAAAAGGG CATTCTTTTA CCACAAGATG ATGGTTAAAA GCGGGCAAGT ACCAGACCCA AGGTCCTATG AGAAACTTAG GGCGATTCTG GAAAACAAGG TAAAGACACA GAACAGAAAG GATAAGACTG CCATTCTTGG TATAATTAAT AGCAAATTCG GTAGGGTTAA GGCTAAGACG AAGGGGAAGA AAGATGAGTT TTGGAAGTAC AAGAAGAGCC GAACTACTTC TCCTGATCGT CACCGATCTT GAAGGTAACC TAAAAGCTAT AT |
| Length | 2212 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13052316.. 13054621 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G50280.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | [EMB1006][embryo defective 1006] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg321495 | copper ion transmembrane transporters |
| 13.0384 |
Ahg481568 | 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase |
| 19.1833 |
Ahg334100 | lactoylglutathione lyase family protein / glyoxalase I family protein |
| 19.8997 |
Ahg491335 | 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase |
| 21.0713 |
Ahg946922 | acylaminoacyl-peptidase-related |
| 21.4942 |
Ahg930082 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
| 23.7065 |
Ahg324617 | embryo defective 1703 |
| 24.1868 |
Ahg938433 | glutathione transferase lambda 2 |
| 24.5967 |
Ahg928248 | |
| 24.5967 |
Ahg338999 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|