Detail


ID : Ahg949608

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949608|scaffold_801495.1
Sequence
AAGAAAAACA AAATCTTTGA ATGGACTGGA ATTTCAAAGT TAGCTCTGGT TATTTATCTG GATTCGATCA AGAACCGGAT TTATCACCAA TGGATGGTTC GATCTCGTTT GGTGGGTCTT CACAGTCAAA AGGGGAATTT TCATTTGATC TGAAACTTGG AAGAAACAAT GGAAACTCTT CCTCTGTTTT TGGTGATACA GAGCAAGTGA TAAGTCTAAG TAAGTGGAAA GAGAGTTCTT TGGCTAAACC AGAGAGTTCG AGAAGTTCGA GTTCAAAGAG AACAAGAGGG AACGGTGCTG GAACCAACCA GATGCCGATT TGTTTAGTTG ATGGATGTGA TTCTGATTTT AGTAATTGTA GAGAGTATCA TAAGAGACAT AAGGTTTGTG ATGTTCATTC AAAAACTCCT GTGGTTACTA TTAATGGTCA CAAGCAGAGG TTTTGTCAAC AATGTAGCAG GTTTCATGCT TTGGAAGAGT TTGATGAAGG GAAGAGAAGT TGTAGAAAAC GTCTTGATGG ACATAATCGA AGAAGACGGA AGCCGCAGCC TGAACATATC GGTCGTCCTG CGAACTTCTT TACGGGTTTT CAAGGTAGCA AATTGCTAGA GTTTTCGGGT GGTTCACATG TGTTTCCAAC TACATCTGTG TTGAACCCGA GCTGGGGAAA TAGTCTTGTA AGCGTTGCTG TGGCCGCCAA TGGTTCGAGT TACGGGCAGA ACCAGAGCTA TGTTGGTTCT TCTCCTGCTA AGACAGGGAT AATGTTTCCA ATCTCTTCTT CTCCAAACAG TAACAGACGC ATAGGGAAAC AATTCCCTTT CTTGCAAGAA GAAGAAAGCT CGAGAACCGC ATCGTTGTGT GAGAGAATGA CGAGTTGCAT CCATGACTCT GATTGTGCTC TCTCTCTTCT GTCATCCTCC TCGTCGTCAG TCCCTCATTT GCTTCAGCCA CCACTTTCTT TGTCCCAAGA AGCAGTTGAG ACAGTTTTTT ACGGGTCGGC ATTGTTTGAG AATGCGAGTG CAGTCTCTGA TGGATCGGTT ATATCCGGTA ATGAGGCTGT CCCTCTTCCG CAAACGTTCC CGTTTCATTG GGAGTAGTAT AAGAAGAAGA AGTAGGT
Length1117
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13252340.. 13253634
Download Sequence
A.thaliana
AGI-codeAT5G50670.1
DescriptionSquamosa promoter-binding protein-like (SBP domain) transcription factor family protein
TAIR curator summary
Alias[SPL13][SPL13B][SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13][SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg337736 TPX2 (targeting protein for Xklp2) protein family
6.55744 Ahg489753 Protein of unknown function (DUF1644)
7 Ahg485551
9.69536 Ahg323420 ataxia-telangiectasia mutated
10.5357 Ahg919366
15.6844 Ahg915810
16.5831 Ahg476008 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
19.4936 Ahg485126 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
19.5448 Ahg490603 Dehydrin family protein
21.4243 Ahg355852 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression