Detail


ID : Ahg355852

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355852|fgenesh1_pg.C_scaffold_7003025
Sequence
ATGGCTAATT AACATGTAAT CGTCCAATTC CAGTTGGAGC GAGCTTTGGC AAGAGCAAAC AGTGGGATGA TTTGGAGGAA GAAGAAGATG AAGAGAGAAA GGAGGAGGAT CACGATATGC GTCTTTATCA AGGTACCAAT AAAAGCGCAG CCCAAACCAG ATAATTTCCT TATTGTTTCT ATAAATATAT GTAGTTTAGG GTTATTGCTT GCTCTCAACG GACTCTTCCC TGAACAAATA CATAAACCGT CTGTTTTCAT CTTCTCCATG GCCAGTTCTA GCAATTTATT GGCTAAGCGA AAACCGGAAG ATGATTTGGA AACCAAACCC ATTCTCAAGA AACATAAGGA AATATCCGAG AAGGAGAAGG AGATAACCGA AGGATTTGCT GATAGTCTCC ACCAGGTCGA GTTGTTGGAG ACAAAATCTG ATCAGCCTAA TTTAATCTCA GTGAAGGAAG CTGCCGTAAC AAAAAAGACG CTCTTTATTG AAACTCTCCC TTACGATACT AAAATACCAA ATATCATCGA TTTCTTCAAA AAGGTTGGAG AAGTTGTTCG TGTTCGACTT ATTCTAAACC TCAAGGGTAC GCTTGTGGGC TGTGGCTTTG TTGAGTTTGC TTCCTCTAAC GAAGCAGAGG AGGCGCTGCA AAAGAAGAAC GGTGAATATT TGTGCGGTCA TAAGATTGTT CTTGATGTGG CTAATAAGGG AGCTAAATAC CTTCCACCCA AGTATTGCAT AGATCACAAG CTTTGTTACG AAGATTACCT TCGACAAGAA AGCCTTCCGA TAGAAGAAGA TGAGACACCT CCTGGTTTTG TTGAGAAAGT ACTCTTTGTT GCCAATCTCT CTCCCCAAAC TAAAATATCA GATATCAAAG ATTTCTGCAA AGATGTTGGA GAAGTTGTTA GTGTTCGACT TATTGTAAAC CACGAGTGTA AGCATGTTGG CTATGGCTTT GTTGAGTTTG CTTCTGCTAA CGCAGCGAAG AAGGTGCTGG AAAAGAAGAA TGGTGAATAT TTACACGATC ATAAGATTTT GTTGATGAAA GGACTTGATG AATCTCCCAA TTTTGTTGAG ACAGTTGCTG TAAGAAAAAA GACACTCTTT GTTGCCCATC TCTCTCACCA AACTGAAATA TCACATATCA TCAGTTTCTT CAAAGATATT GGAGAAGTTG TTCATGTTAG ACTTATTGTA GACTATGCGG GCAAGCATTT GGGCGATGGC TTTGTTGAGT TTGCTTCTGC TAACGAAGCA GAGAAGGCGT TGGAAAAGAA GAACGGTGAA TATTTGCACG ATCGCAAGAT TTTACTTGAT GTGGCTAAGA CAGCTCCATA CCCTCCACTA CCCAAGTATT GCATAGATCA CAAGGTTTGG TATGAAGACT ACCTTCGACG AGAACGCCTT CTGATAGAAG AAGATGAGGC AGTGGATGGA CTTGATGAAT CTCCTGATTT TATTGAGGAA GTTGCGGTAA GAAAAAAGAC GCTCTTTTTT GCAAATCTCT TTTACAGAAT TAGAATATCA AATATCATCA ATTTCTTCAA AGATGTTGGA GAAGTTGTTG GTGTTCGACT TATTGTAAAC CACAGGGGTG AGCATGTGTG CTGTGGCTTT GTTGAGTTTT CTTCTGCTGA TGAAGCAAAG AAGGCGCTGC AAATGAAGAA TGGTGAAAAT TTCCTTGGTC GTTTTATTTT TCTTGACGTG GTTAAGTTAG CTCCATACCC AATCCGACCC AAGTACAACC TTGCAGAGAA GCTTTGGTTC GAAGAGTACC TTCGACGACA ATACCTTCTG ATAGAAGATA ATTTGGAGAC CAAACCGAAT AAGAAGAAAC AGAAGGCACC TACTATGATG GGCAGATTCT GCGGTAAGAA GATTATCTTC TCTTACGACG ACTGA
Length1905
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20418034.. 20422860
Download Sequence
A.thaliana
AGI-codeAT5G41690.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg355810 RNA-binding (RRM/RBD/RNP motifs) family protein
2 Ahg891097 RNA-binding (RRM/RBD/RNP motifs) family protein
2.82843 Ahg937635 RNA-binding (RRM/RBD/RNP motifs) family protein
3.87298 Ahg922858 ribosomal RNA processing 4
15.5242 Ahg891584 RNA-binding (RRM/RBD/RNP motifs) family protein
20.3224 Ahg323716
21.4243 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
22.6274 Ahg332172 zinc finger protein-related
22.8035 Ahg480586 F-box family protein with a domain of unknown function (DUF295)
25.807 Ahg932847 Protein of unknown function (DUF295)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression