Detail


ID : Ahg949658

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949658|scaffold_801545.1
Sequence
AGAGAGAGAG GGAGAGAGAG AGATGCCGGT GCGCGAGGAG CAAGAGCATG AGGTGTACGG TGGAGAGATC TCAGAGGAAG AGGAAGAAGA AGGAGAGATG GATACGGAGG AGTACGAAGA ACACGGCGGA GAAGAAGGCG CCGCCGCCGG AGATGAGGAG CTTGAACCTG GCTCTAGCTC TAAGGACTTA GAGGATATGA AGAAACGAAT TAAGGAGATC GAGGAAGAAG CTGGAGCTTT GCGTGAAATG CAAGCCAAAG CTGAGAAAGA TATGGGTGCT GGTCAAGATC CTTCAGGTGG TGTTAGTGCG GCTGAGAAGG AAGAAGTGGA TTCGCGTTCA ATATATGTCG GCAATGTGGA TTATGCATGT ACTCCAGAGG AAGTCCAGCA GCATTTTCAA TCCTGTGGGA CAGTGAATAG GGTTACGATT TTGACAGATA AGTTTGGTCA ACCTAAAGGT TTTGCCTATG TCGAATTTGT GGAAGTAGAA GCTGTTCAGA ATTCTCTAAT TTTGAACGAG TCAGAACTTC ATGGTCGTCA GATAAAGGTA TCTGCAAAGA GAACTAATGT CCCCGGAATG AGGCAATTTC GAGGAAGGCG CCCCTTTAGA CCAATGAGGG GATTCATGCC CGGAGTTCCA TTTTATCCTC CATATGCTTA TGGGAGAGTT CCCAGGTTCA GACGGCCGAT GCGCTACAGA CCGTACTGAT TAGGCAAAAT TGTTGTTAA
Length729
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13505629.. 13507258
Download Sequence
A.thaliana
AGI-codeAT5G51120.2
Descriptionpolyadenylate-binding protein 1
TAIR curator summaryEncodes a homolog of the protein PABN1, a polyadenylation factor subunit.
Alias[ATPABN1][PABN1][POLYADENYLATE-BINDING PROTEIN 1][polyadenylate-binding protein 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg920022 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
3.87298 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
6.48074 Ahg485540 calcium-dependent protein kinase 13
11.6189 Ahg911648
17.2337 Ahg480991
18.1108 Ahg487950 DEAD/DEAH box RNA helicase family protein
23.4947 Ahg494223 RGPR-related
24.5967 Ahg479016 Rubredoxin-like superfamily protein
31.1769 Ahg350126 U3 ribonucleoprotein (Utp) family protein
35.1568 Ahg940990 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression