| Annotation |
|---|
| Description | jgi|Araly1|487950|fgenesh2_kg.6__1084__AT5G11200.1 |
| Sequence |
TATTTAATTT TGTTCAATCA GAGATTTCGA AACCCTAGTC GATTTCGAGA TCCAACCAAC TCTGCTCCAT ATCTCAGCTT GTAGAATTTG CCAAGTATGG GAGACGCTAG AGACAACGAA GCCTACGAGG AGGAGCTCTT GGACTATGAA GAAGAAGACG AGAAGGTCCC AGATTCTGGA AACAAAGTTA ACGGCGAAGC CGTGAAAAAA GGTTACGTGG GAATACACAG TTCTGGATTC AGAGACTTCC TGTTGAAACC AGAGCTTCTC AGAGCAATTG TTGACTCAGG ATTTGAACAT CCATCTGAAG TGCAACATGA ATGTATCCCT CAAGCTATCT TGGGCATGGA TGTTATCTGC CAAGCAAAGT CTGGTATGGG GAAGACTGCT GTGTTTGTCC TGTCTACTCT TCAACAGATT GAACCGTCTC CTGGCCAGGT TTCAGCACTT GTCTTGTGCC ATACAAGAGA GCTAGCTTAC CAGATCTGTA ATGAGTTTGT GCGATTCAGT ACCTATCTGC CTGATACAAA GGTTTCGGTG TTCTATGGTG GAGTCAACAT TAAAATTCAC AAAGACTTGC TGAAGAATGA ATGTCCTCAC ATTGTTGTTG GTACCCCTGG TCGGGTGCTT GCACTGGCCA GGGACAAAGA TCTCTCTTTG AAGAATGTGA GGCATTTTAT TCTTGATGAG TGTGATAAAA TGCTCGAGTC ACTTGACATG CGAAGGGATG TGCAGGAGAT TTTCAAGATG ACTCCTCATG ACAAACAAGT AATGATGTTC TCAGCAACTC TCAGCAAAGA GATACGCCCA GTCTGCAAGA AATTTATGCA AGATCCAATG GAAATATATG TTGATGATGA AGCCAAGTTG ACTCTTCATG GACTTGTCCA GCACTACATC AAACTGAGCG AGATGGAGAA AAACCGCAAG TTGAATGACC TTCTTGATGC CTTGGACTTC AATCAAGTTG TCATATTTGT GAAGAGCGTG AGCAGAGCTG CGGAGCTGAA CAAGTTACTG GTGGAATGCA ATTTCCCCTC AATATGCATC CACTCTGGCA TGTCCCAAGA AGAGAGGTTG ACTCGATACA AAAGTTTCAA GGAAGGGCAC AAGAGGATCC TTGTCGCGAC TGACTTGGTA GGAAGAGGCA TTGACATTGA GCGTGTCAAC ATTGTTATCA ACTATGACAT GCCAGATTCT GCTGATACAT ATCTTCACAG GGTTGGGAGA GCTGGTAGAT TTGGAACCAA GGGTCTTGCA ATCACATTTG TTGCATCTGC TTCAGATTCA GAGGTTCTTA ATCAGGTACA AGAGAGGTTT GAGGTCGATA TAAAGGAGCT TCCTGAGCAG ATTGATACAT CCACTTACAT GCCGTCTTAA ACAAGTAGCA TCATCTCTCA GGAAAGAACC TCTTCAGATT TCAACCTTGT AGGTGTTCAA AGGGGTCATG GAGGTCCACA ACTATCTCTC ACTCTGTTTG TTGCTTCTAT TTTAGTCTTT CTATGAGGAC AAGTTTTCCC AGATATTTAG ACCGTTTCGT AACTCTTTTA AGAATGAGAT TGAGCCACTC TCCAATTCGC AAAGTTAAGA GCTCTCCTGT TTTTTGTACT AGTGATGATG GTTATGTTTA AAATATTAAG ATTTCATGAT TTAGTCTTTG GCTTGATCAT TGTTTAAATG TTCCTTACTG AATTGATCTA TATTGATGC |
| Length | 1709 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4320401.. 4324004 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G11170.1 |
| Description | DEAD/DEAH box RNA helicase family protein |
| TAIR curator summary | |
| Alias | [UAP56a][homolog of human UAP56 a] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg323893 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
| 11.3137 |
Ahg349526 | Transducin/WD40 repeat-like superfamily protein |
| 11.4018 |
Ahg930609 | Ribosomal protein L13 family protein |
| 14.0712 |
Ahg894139 | histone deacetylase 2B |
| 17.4929 |
Ahg487065 | Ribosomal protein L4/L1 family |
| 17.4929 |
Ahg489891 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
| 18.1108 |
Ahg949658 | polyadenylate-binding protein 1 |
| 19.799 |
Ahg339148 | |
| 20.4939 |
Ahg472587 | Ribosomal protein L18e/L15 superfamily protein |
| 24.779 |
Ahg313937 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|