Detail



ID : Ahg949804

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949804|scaffold_801691.1
Sequence
ATACAATTTC GAAGCTTCCC ATGACCATGG CGTTTCAGAT TATAGCTTCT TCTTCTTCTT CATCACCAAC TATTACAAAA TCTCACCTTT TCTCTTATCC TCCTCTGCAA TCTTGTTATA AAGCTTCGAA ACCTAAACTC TCCTCGTGGT TTTCTCTCAT GGGTTCTTCT CCTTTCTCTC CTTACATTGG TTTAAAGCAT TTGGGCATCT CAATCTCTCC TAAATCTTCA AACCCAGAGA AGAAGAGAAG ATGTAAGAGT ATGATGATTC GTGCGTCTTT GTTTGGTGTT GGAGCACCTG AGGCTTTGGT TATTGGTGTT GTTGCTTTGT TAGTCTTTGG TCCTAAAGGT CTTGCTGAGG TAGCTCGGAA TCTTGGAAAA ACTCTGCGTA CATTTCAGCC AACGATTAGA GAGCTACAAG ATGTTTCAAG AGATTTTAAA AGTACCCTTG AGCGTGAAAT TGGCCTTGAT GAAATCTCAA CGCCAAACGT GTACAACCAA AACAGAACCA ATCTTGTTCA ACCTCCTCCT CCTCCACCAC CACCACCATC AGTTCCTAGC AATGAAGCTC CTGTGACTGC AAATGATCCC AATGATTCAC AATCACCTAA AGCTTACACA ACGGAGGATT ACTTAAAGAT CACTGAAGAG CAGCTAAAAG CTTCGTCTCC CGCTGAAAGC CAAACAGAGG ATCAAAATCA GACTCAAGAA CCGCTACAAC CCACGAGTGT ACAAACACCA ACCGGAGAAA GCCAGCCCAA TGGTACAACG AGAGAAACAA CAGCTGCATC TCCTCCAAGG CAAGATTGAA AGCACTAAAA TATGACTTGT AGT 
Length833
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14227440.. 14229176
Download Sequence
A.thaliana
AGI-codeAT5G52440.1
DescriptionBacterial sec-independent translocation protein mttA/Hcf106
TAIR curator summaryHCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB
Alias[HCF106][HIGH CHLOROPHYLL FLUORESCENCE 106]
Gene coexpression
MR
MR Locus Description
18.6815 Ahg489709 ascorbate peroxidase 4
21.5407 Ahg482821 plastid-specific ribosomal protein 4
23.2164 Ahg482506 RNA-binding (RRM/RBD/RNP motifs) family protein
28.8271 Ahg939449 Ribosomal protein L1p/L10e family
31.1769 Ahg493601 acetyl Co-enzyme a carboxylase biotin carboxylase subunit
34.2929 Ahg477973 ATP-citrate lyase B-1
34.6987 Ahg933784 proteinaceous RNase P 1
36.9324 Ahg496515 nucleoside diphosphate kinase 2
43.9318 Ahg488173 Ribosomal protein L10 family protein
46.4112 Ahg933932 Ribosomal L28 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression