Detail



ID : Ahg496515

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496515|fgenesh2_kg.8__2331__AT5G63310.1
Sequence
GAAGCTAAGA CAAAGCGCAG AAAATGGTGG GAGCGACTGT GGTTAGTAAA TGGACTCTCT GTGTTACTTC GCCGTCGGTA AGAAACTCGA CAAGTCTCAA TCCACACTGC TCTCCGGCCA GTGTTAACCT ACGCACAGAG TTGGCCGCAT TTCGTCCTCA GTTCCGTCTC TTCTCGCCCG AATCATCGTC TCGCCGCCGT CTTCGCGCTT CCAGCTCCGC CGAATCGGGA ATCTTCCTCC CTCACCTTGT AGCTTCTATG GAGGAAGTTG AGGATACTTA CATTATGGTG AAACCTGATG GCATACAACG AGGCCTTGTA GGAGAAATCA TCTCTCGCTT TGAGAAGAAG GGATTTAAAC TTATTGGGCT CAAGATGTTT CAGTGCCCAA AAGAATTGGC TGAGGAGCAT TACAAGGATC TTAGTGCTAA ATCATTCTTT CCTAACCTGA TTGAGTACAT CACTTCAGGC CCAGTTGTGT GTATGGCTTG GGAAGGTGTT GGCGTTGTTG CTTCAGCCAG GAAGCTAATA GGGAAAACAG ATCCTCTTCA AGCTGAACCT GGTACTATAA GAGGAGATCT TGCTGTGCAA ACCGGAAGGA ACATTGTGCA CGGTAGTGAT AGTCCTGAAA ACGGCAAGCG TGAGATTGGT CTGTGGTTCA AAGAAGGCGA GCTATGCGAG TGGGATTCGG CTCTGGCTAC ATGGCTAAGG GAGTGATCAT TGAGGAGACT ACTTGTTTTC TTGTTACTGA TGATGAGCTT TGGTGTTTTG TTCCTGATTT TGG 
Length783
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19657041.. 19658839
Download Sequence
A.thaliana
AGI-codeAT5G63310.1
Descriptionnucleoside diphosphate kinase 2
TAIR curator summaryMaintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.
Alias[ATNDPK2][NDPK IA][NDPK IA IA][NDPK1A][NDPK2][ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE KINASE 2][NUCLEOSIDE DIPHOSPHATE KINASE IA][NDP KINASE 1A][nucleoside diphosphate kinase 2]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg933932 Ribosomal L28 family
6.48074 Ahg484572 ribosomal protein L12-A
10.583 Ahg939504
11.4891 Ahg483405 Ribosomal protein L3 family protein
11.6619 Ahg484358 ribosomal protein L15
16.1555 Ahg933784 proteinaceous RNase P 1
16.4317 Ahg489709 ascorbate peroxidase 4
16.7332 Ahg934855 Uroporphyrinogen decarboxylase
17.1464 Ahg474626 photosystem I subunit G
17.3781 Ahg492469 FtsH extracellular protease family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression