| Annotation |
|---|
| Description | jgi|Araly1|949896|scaffold_801783.1 |
| Sequence |
AATCTTATTA GTCTCAAAAC TATGAATTTC CGACAAGAGA AGTTTGTAAG GTTTCAAGAT TGGAAGTCCG ACAAGACTTC CTCCGACGTG GAATATTCCG GGAGAAATGA GATTCAGACT GGAATATTCC GGAGAACAAT AAGCTCAATC TCAGACAAGT TTTACAGAAG CTTTGAATCA AGCTCTGCAA GGATCAAAGT TTTCAAAAGA TCTTACAAGT CTTACTCTTT TAAAGAAGCT GTTTCAAAAG GGATTGGTTC AACTCACAAA ATACTTGACC CACAAGGACC TTTTCTTCAA AGATGGAACA AGATCTTTGT TTTAGCTTGT ATCATCGCTG TTTCGCTTGA CCCTTTGTTC TTCTACGTGC CTATCATTGA TGATACCAAG AAATGTCTTG GTATTGACAA GAAAATGGAG ATAACTGCAA GCGTTTTGCG CTCTTTCACT GATGTTTTTT ACATTATTCA CATCATTTTC CAGTTTCGTA CTGGCTTTAT CGCTCCTTCG TCTCGAGTTT TTGGGAGAGG TGTTCTTGTC GAGGACAAGC GAGAGATTGC AAAACGTTAC TTGTCCTCAC ATTTCATAAT TGACATTCTT GCTGTTCTTC CGCTTCCACA GATGGTGATT TTGATTGTCA TTCCACATAT GAGAGGGTCA TTGTCTTTGA ACACGAAGAA TATGTTGAAG TTCATTGTTT TCTTCCAATA TATACCGAGG TTTATAAGAA TCTATCCGCT CTACAAGGAA GTGACAAGAA CTTCAGGCAT ACTCACTGAG ACAGCTTGGG CTGGAGCTGC TTTCAATCTC TTCCTCTACA TGCTTGCTAG TCATGTGTTT GGTGCTTTCT GGTATTTGTT CTCAATCGAA CGCGAAACAG TATGTTGGAA ACAAGCTTGC GAGAAGACAA ACTCAAGCTG CATTCCGAGC TTGTTGTACT GTGACCGTCA AATTCCAGGA GGCAATGCTT TCCTCAATGA GTCTTGTCCG ATTCAGACAC CAAACACAAC ACTTTTCGAC TTTGGGATAT TCCTTAACGC ACTTCAGTCC GGTGTAGTGG AATCTCAAGA TTTCCCTCAG AAGTTCTTTT ACTGTTTCTG GTGGGGTCTG CAAAACCTCA GTTCGCTCGG TCAGAACCTT GAAACAAGTA CATATGTTTG GGAGATCTGT TTTGCGGTCT TCATTTCTAT TGCCGGGCTG GTTTTGTTCT CGTTCTTGAT TGGGAACATG CAGACGTATC TGCAATCGAC GACCACAAGG TTGGAGGAGA TGAGAGTAAA GAGAAGAGAC GCAGAACAAT GGATGTCTCA CCGTTTGCTC CCTGAGAACT TGAGAAAAAG AATCCGGCGG TACGAGCAGT ACAAATGGCA AGAGACAAGA GGCGTTGACG AAGAGAATCT TCTGAGTAAT CTTCCCAAAG ATCTTAGACG CGACATCAAA CGTCATCTCT GTCTCGCCCT TCTCATGCGG GTCCCGATGT TTGAGAAGAT GGACGAACAG CTTCTTGATG CTCTCTGTGA CCGTTTGCAA CCTGTGTTAT ACACAGAGGA AAGCTACATA GTAAGAGAAG GAGATCCGGT AGACGAAATG CTCTTTATTA TGCGTGGGAA GCTTCTAACA ATCACAACAA ATGGTGGAAG AACCGGTTTT TTCAATTCCG AGTATCTTGG AGCCGGTGAT TTCTGCGGTG AGGAGCTTTT AACCTGGGCT TTAGACCCAC ACACATCCTC AAACCTCCCA ATCTCAACAA GAACTGTTCG AGCTCTCATG GAAGTCGAAG CTTTCGCACT TAAAGCTGAT GACCTCAAAT TTGTGGCATC CCAGTTCAGA CGTCTTCACA GCAAACAGCT AAGACATACT TTCAGGTTCT ACTCGCAACA ATGGAGGACT TGGGCCGCTT GCTTCATACA AGCCGCTTGG AGAAGATACA TTAAGAAGAA ACTTGAAGAA TCTCTTAAAG AAGAAGAGAA CCGGTTGCAG GACGCTTTGG CTAAGGAAGC TTGTGGAAGT TCCCCAAGCC TCGGGGCTAC AATATACGCA TCACGGTTTG CTGCAAATAT CTTGCGCACA ATACATAGGA GCGGATCAGT AAGGAAACCG AGGATGCCAG AACGAATGCC ACCTATGCTA CTTCAGAAAC CAGCAGAACC AGATTTCAAC AGTGATGATT AATTAATTAA TTAGCATATG TA |
| Length | 2192 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14585632.. 14588327 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53130.1 |
| Description | cyclic nucleotide gated channel 1 |
| TAIR curator summary | member of Cyclic nucleotide gated channel family |
| Alias | [ATCNGC1][CNGC1][CYCLIC NUCLEOTIDE-GATED CHANNEL 1][cyclic nucleotide gated channel 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.784 |
Ahg496189 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 14.2127 |
Ahg922740 | Protein kinase family protein with leucine-rich repeat domain |
| 17.3205 |
Ahg942029 | Protein of unknown function (DUF1162) |
| 22.1133 |
Ahg482304 | Protein kinase superfamily protein |
| 22.5832 |
Ahg485812 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 23.4947 |
Ahg916552 | |
| 27.1109 |
Ahg485232 | serine palmitoyltransferase 1 |
| 33.2415 |
Ahg480306 | chromatin remodeling 5 |
| 40.7431 |
Ahg939626 | HSP20-like chaperones superfamily protein |
| 42.332 |
Ahg315987 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|