| Annotation |
|---|
| Description | jgi|Araly1|949934|scaffold_801821.1 |
| Sequence |
TTGGTAATTC GAATCAGAAG ATATGATAAT CAAACGGAAA TTGAAAACTC GAATGTCGAG TTTGAAACGA TGTAACTCGA CTAATGAAGA AGATGATAGA GCTAAGAAGA AGAGAAAGGT CAACTTCAAT GGTGGTGGTG ATTACTATTA TCCTCTTAAT CTTCTTGATG AGATTGGTGT TGGGATAGTT CCGGGTAAGA ATGGATTCTC TGTTTCTTTG TGTAAGGAAG TTGAGGTGGT GGAGGTGGAG GAGGAGATAA AGTCAAAGAG ATTAGTTGCT GATACTAGCC AACGTGGGAG AGATAGGATG GGTGAGGTTT CACGGCCACC GCTTGTGAGG ACATCTAGAG GAAGAGTTCA GGTGCTTCCT TCACGGTTTA ATGACTCGGT TCTCGAGAAT TGGAGGAAAG ATAGTAAAAG TAGTGGCGAA GAACGCGAGG AAGAGATTGA AGAAGAAGCA TGCAGGAAGG AGAAAGTCAA AGCTAAATTT ACTCCTAGGA ACTTTAAGTA TAGTAGTAGT GCATTGTGTG AAGAGAGAGA TGATGAGGAT AAATGTGAAG AGATTGGTAG ATATGGTAAT AGCTATGAGA TGAAGAAGCA TATGATGAGT TCACGGACCT CACTTGCTTC TCTTCAGGAG CAGCGTTATG TAGATGATGA GCCTCGTCCT AAGAAAGAGG GTGTTTATGG GCCAGAGGAT TTTTATTCGG GTGATTTGGT TTGGGGTAAA TCTGGGAGGA AAGAGCCGTT TTGGCCGGCT ATTGTTATTG ATCCAATGAC GCAAGCGCCT GAGCTTGTTT TGCGTTCTTG TATACCTGAT GCAGCCTGTG TTATGTTCTT TGGTCATTCT GGGACAGAGA ATGAAAGGGA TTATGCATGG GTTAGAAGAG GGATGATTTT CCCATTTGTG GATTATGTAG ACAGGTTTCA AGAACAGTCT GAACTGCGTG GATGCAACCC TAGGGATTTT CAGATGGCAC TTGAAGAAGC TCTTTTGGCA GACCAAGGGT TCACAGAAAA GCTGATGCAG GATATTCACT TGGCCGCAGG TAACCAGAGT TTTGATGATT CTGTCTACAG ATGGATTGAA GAAGCTGCAG GCTCGAGCCA ATATCTTGAT CACGTTGCTC CAAACCAGGA CATGAAGAAA TACAGAAATC CAAGAGCCTG TGTAGGATGT GGAATGATTC TTTCTTTAAA GATGGCACAG AAAATGAAAG CTCTGATTCC CGGAGATCAA TTATTGTGTA AACCTTGTTC AAGGCTGACA AAACCGAAAC AGGTTTGTGG GATATGCAAG AAGATATGGA ATCATTTGGA TAGTCAGAGC TGGGTGCGTT GTGATGGGTG TAAAGTCTGG ATTCACTCAG CGTGTGATCA AATATCACAT AAGCATTTTA AGGATTTGGG GGAAACAGAT TACTATTGTC CCACATGCAG AACAAAATTT AACTTTGAGT TATCAGATTC AGAAAAACAA GACTCAAAAT CCAAACTTGG CAAAAGCAAT GCCCCAATGG TGCTTCCTGA TAAAGTTATT GTTGTATGCT CTGGAGTAGA AGGCATATAT TTTCCAAGCC TTCATTTAGT CGTATGTAAG TGTGGATCTT GTGGACCTGA AAGGAAAGCA CTTAGTGAAT GGGAAAGGCA TACTGGTTCA AAAGCAAAAA ATTGGAGAAC TAGTGTTAAA GTTAAAAGCT CCAAGCTGCC GCTAGAAGAA TGGATGATGA AATTAGCAGA GTTCCACGCA AATGCTACTG CAGCAAAACC TCCTAAACGA CCCTCTATAA AGCAGAGAAA GCAGAGGTTG CTTTCCTTTC TTAGAGAAAA GTACGAGCCG GTCAACGTGA AGTGGACAAC CGAGCGATGT GCAGTTTGCA GATGGGTTGA AGATTGGGAC TACAACAAGA TCATTATCTG CAACAGATGT CAAATCGCAG TTCATCAGGA ATGCTATGGG ACGAGAAACG TTCGTGATTT CACATCATGG GTCTGCAAAG CCTGCGAGAC ACCTGAGATC AAACGAGAGT GTTGCCTCTG TCCTGTAAAA GGAGGTGCAT TGAAGCCAAC TGATGTGGAG ACGCTGTGGG TTCACGTAAC ATGTGCTTGG TTTCAGCCTG AAGTATGTTT TGCAAGTGAA GAAAAAATGG AACCAGCTTT GGGGATTTTG AGTATTCCAT CAAGTAATTT TGTGAAGATT TGTGTAATAT GCAAGCAAAT ACATGGCTCA TGCACTCAGT GTTGCAAGTG CTCTACGTAT TATCATGCCA TGTGTGCTTC CCGAGCTGGG TATAGAATGG AGTTGCACTG CTTGGAGAAA AATGGTCGAC AGATAACAAA GATGGTGTCG TATTGTTCTT ATCACAGGGC TCCGAATCCA GATACTGTAT TAATAATACA AACGCCTTCA GGGGTCTTTT CTGCGAAAAG TCTTGTTCAA AATAAAAAGA AAACAGGTTC GAGGCTTATT TTAGCAAACA GAGAAGAAGT TGAAGAGTCC GCCGCAGAGG ATACCATACC AATTGACCCA TTTTCTTCTG CTCGTTGTCG ACTATATAAA AGAACGGTTA ATAGCAAGAA GAGGACTAAA GAAGAAGGTA TTCCTCACCA CAAAGGAGGA CCACGTCATC ATCCTTCAGC AGCGATCCAA ACTTTGAACG CATTCAGGCA TGTGGCAGAA GAGCCCAAAT CATTTTCCTC GTTCAGGGAA CGGCTTCACC ACTTGCAGAG GACAGAAATG GATCGGGTCT GCTTTGGTCG ATCTGGGATA CATGGATGGG GCCTTTTTGC AAGAAGAAAT ATTCAAGAAG GAGAAATGGT TCTTGAATAC CGTGGGGAAC AAGTGAGAGG AATCATTGCG GACTTAAGGG AAGCAAGATA TCGTAGGGAA GGGAAGGATT GCTATCTGTT TAAGATCAGT GAGGAAGTAG TGGTGGATGC GACAGAAAAA GGGAATATCG CTCGACTAAT AAACCATTCG TGTATGCCAA ATTGCTATGC AAGGATTATG AGTGTAGGAG ATGATGAAAG TCGGATTGTT CTGATTGCCA AGACCACTGT AGCTTCTGGC GAGGAGTTAA CATATGATTA CTTGTTTGAT CCAGATGAGC CTGACGAATT CAAGGTGCCG TGTCTATGTA AATCCCCTAA CTGCAGGAAA TTCATGAATT AGAGAAAGTT TTATGTAGCT GCTC |
| Length | 3194 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14776066.. 14781763 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53430.1 |
| Description | SET domain group 29 |
| TAIR curator summary | Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. |
| Alias | [ATX5][SDG29][SET29][SET domain group 29] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg487865 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 7.48331 |
Ahg899656 | |
| 9.43398 |
Ahg479547 | lipid-binding serum glycoprotein family protein |
| 10.6771 |
Ahg495199 | Diacylglycerol kinase family protein |
| 12.49 |
Ahg323716 | |
| 17.8045 |
Ahg470814 | Histone superfamily protein |
| 19.3907 |
Ahg491306 | |
| 22.7156 |
Ahg935831 | quiescin-sulfhydryl oxidase 2 |
| 34.641 |
Ahg470606 | cell division cycle protein 48-related / CDC48-related |
| 35.4965 |
Ahg898853 | F-box/RNI-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|