Detail



ID : Ahg470606

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470606|fgenesh2_kg.1__560__AT1G05910.1
Sequence
AAACAAAAAA AAAGAGGGAG AAGAGCAACG AAGACGGACC TGCAAATTCT GCAGTCTCCA CTGACACTTT CGATCATTCT CTCTGTTCAC CTTCTTCAAT CCTCAGGTGT TTATGGAAGG AGATAATCAT CAGAGGTAGC ATTTCTCCAT GCATCCTAAG CGATCAAGTC AAGGAGATGG GTCAGTTACT AAGCCAGTTA GAAGCAGTGA TAGGCTTAGG AGGAGGCCCA AATTGTATAA TCGCTCATAC GTATACTACT CACCAAACAT ATTACATAAT AGGAAAAGAA ACACAAAGAC AAGAACGGCA GCCTCTCAGA TCGCAAAGAT GCTGCACAAA GGGAGCCGTC CAGCGAGGGC ATCAAATGCC ACGCCAATTG CATCTGATCT CCGGCGTTCC ACGAGGAAGA GAAGAATTTC TGTAAACCTT GAGGACTATA CAGACAGTTC TGGAGCGGAG GATGAAGATA TGATGAGTCC AGCATATCGA ACTTTGAGGA GTAGAGTTTA TAATGGAGTT CATAAAAATT ACTCAACTTC AAAAAGTAGA AAGGACATGG ATGCTGAATT GGCACCACGT CGTGAAGGTC TCCGTCCTCG TCGTTCAAAT AAACGACTGA AAACAGAATC TGGTACTGAC CAAGATACAT CAGAAGAGAA AGATGGCCAA GATGAAACCG AGAATGGGAA TGAATTAGAT GATGCGGATG ATGGTGAAAA TGAGGTTGAG GCTGAAGACG AGGGTAATGG AGAAGATGAA GGTGATGGCG AAGATGAGGG AGAAGAAGAT GGTGATGATG ATGAAGAGGG TGATGAAGAA CAAGAGGGAA GGAAGAGATA TGATCTGCGA AACCGTGCTG AAGTGCGGAG GATGCCTACA GAAGAAATCA ACAAGCAACA ACAACCTAGA TCTCCTCGGA GAGTATTGCA TCAAGGCATG GGCACCAGGG TTGGAAGGCA TGTTAGGAGA GGTGGGTCTC GGCCTCACAA GCGCCATCGT TTTACAAGAA CAGATGATTC AGATGATTCT CTTCTTGTGG ACGAGTTGGA CCAGGGCCCT GCAATTCCCT GGGCTCGAGG TGGAAACAGA TCTGGAGCAC CTTGGCTATT TGGGGGTTTG GACACGTATG GGTCAAGTTC ATTGGGGTTG AACGTTGGAG CTTCTGGTTG GGGTCACCAG AGTGATGGTT TGGCTGCATT AACTTCTGGT GTTCAGACTG CTGGGCCAAG CTCTAAAGGA GGTGCAGATA TCCAGCCACT GCAGATTAAT GAGGATATAA ATTTTGATGA CATTGGTGGG CTGTCCGAAT ACATTAATGA TTTGAAGGAA ATGGTTTTCT TTCCGTTGCT GTATCCAGAG TTCTTTGCAA GTTACAGCAT TACTCCTCCC AGAGGTGTAC TGCTGTGTGG TCCTCCAGGC ACTGGTAAAA CACTGATTGC TCGAGCATTA GCATGTGCTG CTTCAAAAGC TGGACAGAAA GTTAGCTTTT ATATGCGGAA GGGTGCTGAT GTTCTTAGCA AGTGGGTTGG CGAGGCTGAG AGACAGCTAA AGCTACTCTT TGAGGAGGCT CAGCGAAACC AGCCTTCCAT AATCTTTTTT GATGAAATTG ATGGTCTTGC TCCCGTAAGA TCTAGCAAAC AGGAACAAAT ACATAATTCT ATTGTTTCAA CTTTGCTGGC GCTGATGGAT GGCCTCGATT CTCGTGGTCA AGTTGTTCTC ATTGGAGCAA CAAACAGGGT AGATGCAATA GATGGAGCGT TACGCCGCCC TGGCAGATTC GATCGGGAGT TCAATTTTTC TTTACCAGGC TGCGAAGCAC GAGCCGAAAT ATTGGATATT CACACTCGTA AATGGAAGCA CCCACCTACT AGGGAGCTGA AAGAGGAACT GGCAGCTACT TGTGTAGGGT ATTGTGGTGC TGATCTAAAA GCTTTGTGCA CTGAAGCTGC GATTCGTGCT TTTCGTGAGA AATATCCACA AGTTTATACC AGTGATGATA AATACGCCAT AGATGTTGGG TTGGTTAACG TTGAGAAGAG CCACTTTGTA GAGGCAATGT CAGCTATTAC CCCTGCTGCC CATAGAGGGT CTGTTGTGCA ATCCAGACCA CTCTCTCCGG TTGTATTGCC ATGTTTACAT CGACACCTCC TTGAATCCAT GAGTTTAATA TCAGATATTT TTCCCTCGTC AGCCACGTCA TCGGATTTGA CGAAGCTGTC AATACTTTCA TTTGGATCTG CAATTCCTCT TGTTTATCGA CCTCGACTTT TGCTGCTTGG TGGTGAAGGA GTTGGACTGG ATCATCTTGG GCCTGCAATT TTACATGAGC TAGAAAAATT CCCTATTCAT TCTCTGGGAC TTCCATCTCT CCTTTCGGAT CCTGGTGCAA AGACCCCGGA AGAGGCGTTA GTACATATAT TTAGTGAAGC TAGGAGAACA ACACCTTCAA TACTTTACAT ACCAATGTTC AATAATTGGT GGGAAAATGC TCATGAACAG CTTAGGGCTG TATTTCTGAC TTTGTTAGAA GAATTGCCAT CAAATCTACC CATTTTATTA CTTGCTACAT CTTATGGTGA ATTATCTGAC GTGGAAGAGC AGTCAGTATT TGACAATCGA TCTGTCTATA CTGTGGACAA ACCATCAAAT GAAGACAGGT CTTTGTTCTT TGACCGTTTG ATTGAAGCTG CTCTCTCAGT CATTTCTGGC TTAAATGGCA AACCATTTGG ACCACAATCC CTTCCAGAAC TTCCCAAGGT TCCAAAAGAA CCTACTGGTC CAAAACCCGC AGAAGTAAAA GCCAAGGTGG AAGCAGAGCA GCATGCCCTT CGACGATTGC GTATGTGTCT CAGAGATGTT TGCAATAGGA TACTATATGA TAAAAGATTC AGCGCATTCC ACTTTCCAGT TACTGACGAG GATGCTCCAA ACTATCGCTC AATAATTCAA AATCCAATGG ATACGGCTAC TCTGCTGCAG CGTGTTGATA CTGGGCAGTA TCTGACATGT GCACCGTTCT TGCAAGATGT TGATCTCATT GTGAGAAATG CCAAGGCTTA CAATGGAGAT GATTACGCAG GAGCGAGAAT TGTCAGTAGA GCCTATGAGC TTCGAGATGT AGTGCATGGG ATGCTGTCAC AGGTGGACCC AGCACTGCTA ACACATTGTG ATAAGATCGC AGCTGAAGGT GGTCCTTCAC AGATACCAGA TGATCTGAGT GGATCAATCC TCGGTTTAGC TCCTGTTGTA CAGATGGGAA CTGTTACTAG AACCAGTGCC CGACTTCGAA ATGTGCAGCC AGAGGTCAAT TTAGATCGAG ATTATGAAGG TCTTAAAAAG CCCAAGAAAA CTACTGATGC TGTCTGTACA GAATCAGCTG CAGACAAATC ACAAAACCAA GATTCAGGCA AAGAGATACC ATCTCCGGAA GCGGCCAACA CACAGTCAGC AGATCCTTCT CCAACAGATG GTAATAGAGA AGACCGAAGC GAGCCACCAA GTAAAGAGGC ATCTGCAGTA GATGTGAGTG GTGATACTTC CAGGGATTCT GCTAAGTCGG ATGAAGAAAT TTCAAGCCGA ACAGAATCTG TAAAGGGATT ACTCATGGAA CGCACTGACA ACTACAGCAT TCCGCAGATG GAGAGGCTCT ACACTCGAAT CATGAAGGGT GTTCTTGAGA CTTTAGACGA AGGGCTTCGT GATGATGATA ATAACCCTAA GTATTCAATT TTGAGATTTT TGTCGGAATT CGCTCAGCAT CAGGCGAATT TCTGAGGCTA AATTTTCTCA TATCGGTCAC TAGGTAGGTT TGCTAAAAGA AAGGAACAAA AATCCGGATT CTTCTTTGAC TGAAAAAGCT GCAAGAACAA ATGGTAGTAG TTTATCG 
Length3887
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2001055.. 2007688
Download Sequence
A.thaliana
AGI-codeAT1G05910.1
Descriptioncell division cycle protein 48-related / CDC48-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg471614 ubiquitin carrier protein 1
3.16228 Ahg491547
8.12404 Ahg490272
9.38083 Ahg915270 Homeodomain-like superfamily protein
12.2474 Ahg474170 Ergosterol biosynthesis ERG4/ERG24 family
17.3205 Ahg355292
19 Ahg496842 plant U-box 49
20.8567 Ahg934063 geranyl diphosphate synthase 1
21.3542 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
23.6643 Ahg489990 Ubiquitin-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression