Detail



ID : Ahg950055

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950055|scaffold_801942.1
Sequence
AGAATAAACA ATATGTTGTG ATGCAAAATA TTTCACTAAA AACGAAGAAA AAAGGCAAAA AAATCGATTC AGAGATCGAT TTCTCGTCTT CTTGTAATGT GTCCATTTCT ATATTCATTA CGGAATATTC TATAACTAAA GTTCTTACGA AAAGTTTGTT GGCGAGTTAC GCATCCCTGG AGGTCTGTGC GGGTCCGGTG GCTTGGCGGA GTGAAGTCGA CGGTGGAAAT CGGTTTCTTC CATCATTGGC CTCATCCCCT CGTCGCTACT GCAAAGCTGT GGGCCTTGAA TCCGCCGGGT ATGGTGCGTC TGGCTCGTTG CCTCCGGAGT TCCGAGCCGC AGCTCCGATT CCGTGCGGCG ACGCCACCGT ATGGGATCCC AAAACCGACT GTTGCTCTTG GTACTGCCTC GAGTGCGGCG ACGCTACCGT CAACCACCGC GTCACTTCCC TAATCATACA AGACGGCGAG ATCTCCGTTC AGATCCCAGC TGAAGTCGGT GACTTACCGT ATCTTACATC CCTTATCTTC CGCAAACTCA CTAACCTCAC TGGTCAGATC CAACCCACTA TTGCCAAGCT CAAGAATCTC ACTTTTCTCA GACTAAGCTG GACGAATCTC AC 
Length622
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15361382.. 15362823
Download Sequence
A.thaliana
AGI-codeAT5G06870.1
Descriptionpolygalacturonase inhibiting protein 2
TAIR curator summaryEncodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate.
Alias[ATPGIP2][PGIP2][ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2][polygalacturonase inhibiting protein 2]
Gene coexpression
MR
MR Locus Description
9.79796 Ahg908052
10.8628 Ahg925538
10.9545 Ahg474716 dehydrin family protein
12.8062 Ahg899683
18.3303 Ahg492278 arginine/serine-rich splicing factor 35
20.8567 Ahg894926
21.4942 Ahg476772
25.5734 Ahg485014
26.5141 Ahg896705
26.9444 Ahg930984
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression