Detail



ID : Ahg950538

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950538|scaffold_802425.1
Sequence
CTTCTCATCT TATATTCTCC ATGGGCAAGA GGCTTTTGAA ATGCTCCACA TCCACCGATG TTGAAGCTAC CACAGAGCCG TCGCAGAATG ATGATTTGGA GCAGCAAGTA TTTCCGAAGA AGCAAAAAAA GAAGGCATTA GCACTCGATG GTAGTTTCTT GGGAGGTATG CAGCTTGGGG TTGTGAAGAA TAATACTGGA AGCAGTTCTG ATTTCTTTCC TAACTTTAAA GGGTGTGAAC GTTGTGTCCT TACTCAAAGG AAGTACCTCC ATGACCAATT CATTGCAACT CGTGGTGGTC GTATGATGGC CAAAGTTTTT CCTTATCTCC GGCGACATTG CATCACCGTA ACTCATGACT TGTTGAAGTG GGAGACTGAT TTTAAGAAGG CTCTCGAGGA ACCTGAGCTC TATCAGCGAA TTCGTGAGAC TAATATCAGG TACACTGCCA TTTCCTTTCT CACTCAGCTT CTCAAAGAGC AGTGGGCATT ACTTGGGAGT TTCTCTCTTG AATCAGTTTC TCAAAGAAGG TTTCTTTTAG AGGGGGCTGG GGGGGACGAG TCGCGTGGTG AAAGGGAGGA CGTTAATGGG ATTGATAGAG AGAACGCTAC TGATGGTGAT GGAATGGAAT GTCTGGAGAA TGATGGGATT GATAATGTGA ATGCAGCAGA GGAGGAGCAC ACAATGAGTG CACAAGAACA GGAACATGAG CAAAGTCTTG ATAAGGGAGA CAAAATGGTT GCTCGAGAGC TGGAGGATTA TTTGTTAGAG ATTCAAAGAC ACATCGACCC TTCCATTAGG CGAGGGGAAG AACCTAACAC TGCAATTAAT CACTCAGTAG ATGTCACTCC TCAGCCTACT CGGGTGAATA GGACTGGAAC ACGCGGTCAA GACCATAATG AAGCAACAGA TAATGTAAAT GAGAAAGGTT CTGATAGTCA GAGAACGTGG TCTGGCAGAG TTCGGCCTCG TCTACCAACC CCTGTAACTC TGAATGTATC TCCATTGAAG AAGGACGGAT TGGCAAAACC CCATGTCAGA AGGCCAAAGA AATTCTGGAC GCCTGAAGAA GTGGAAGCTC TGAGGGAAGG AGTAAAAAGA AATGGAAACC CTGCAGTATT CGCGGAGAAG ACAGAGCTTG ATGGTAGTTA CTTGGGAAGT ATGAAGCTTG AGGTTGCGAT GGATAATACT AGAAGCGGTT CTGATATCTT TCCTAACTTT AAAAAGTGTG AACGTTGTGT CCTTGTTCAA AGGAAGCGCT TCCATGACCA TTTCGTTGCA ATTAATGGAG GTCTTAGAAT GCCCAATTTA GCTGTTTGGA AAAAATATAA AGCTAAAAAA GTTGAAGCAG AAAAACGGAG CTAAGAATGG TCGTTTTGAC TGTT 
Length1384
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17390777.. 17405448
Download Sequence
A.thaliana
AGI-codeAT5G58340.1
Descriptionmyb-like HTH transcriptional regulator family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg950402 myb-like HTH transcriptional regulator family protein
1.41421 Ahg932745 other RNA
2.82843 Ahg474886 methyltransferases;copper ion binding
3.16228 Ahg481315 RNA recognition motif and CCHC-type zinc finger domains containing protein
7.74597 Ahg493213 DEA(D/H)-box RNA helicase family protein
10.7703 Ahg326244 Aquaporin-like superfamily protein
12.6491 Ahg482420 PIN domain-like family protein
13.7477 Ahg480707 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
13.8564 Ahg928106 Heavy metal transport/detoxification superfamily protein
15.5885 Ahg346362
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression