Detail



ID : Ahg480707

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480707|fgenesh2_kg.3__3408__AT2G18040.1
Sequence
CGTCAATAAT AATTAGGGTA AAGCAAAAAT AGTGAAGCAG AGCCGCAAAA ACATTTTCTC AAAATCAACG AAGATAGATT CAGATCGGAA ACGAAAGAAC GATTCGGTCT CCTCCACAGA TCGAACATCG AAGGAGAAGA AAGACGATCA TCACAACAAG CATCGAAAGA AGAGCAAGAT GGCGTCGAGA GACCAAGTTA AGGCATCGCA CATTTTGATT AAGCATCAAG GATCTCGGAG GAAAGCGTCG TGGAAGGATC CAGAAGGGAA GATTATCTTG ACTACCACTA GAGAAGCCGC CGTTGAGCAG CTTAAGTCGA TCCGTGAAGA TATTGTTTCC GGCAAGGCGA ACTTCGAAGA AGTGGCGACT CGTGTTTCTG ACTGTAGTTC TGCTAAACGC GGCGGCGATC TTGGTCCCTT TGGTCGAGGT CAAATGCAGA AACCATTTGA GGAAGCGACT TACGCACTCA AGGTGGGAGA TATAAGCGAC ATTGTCGATA CAGACAGTGG AGTCCACATC ATTAAGAGAA CAGCTTGACC TGATCCGATC TAATAAATGT ATCGAAGGTG CCAGCTTTGT TTCCCTTCTC TTCTTGACCA GAAGAACATA GAAGAAGAAG AATAAGAAGA ACTTAATTCA AGGTTATTGT TATTGTGGTT TTGATTCTGA AACTGTCTAC GAATTTGATA CAAACAACCC AAACATATGA TAAAACCAGA CACTCTATCT CATTTCTTCT TAAAGCTTCA TAAGCACATT CCATGTCGTA GACAGTGATT TGTATAATCA TATTTCAGTA TCTTTGTCAT ATGTTACTGC AACATTCTGG CATCTTTTTT AGTGTTGTCA TTTTGCTCTT AAACTTTTGA TA 
Length872
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21167087.. 21168667
Download Sequence
A.thaliana
AGI-codeAT2G18040.1
Descriptionpeptidylprolyl cis/trans isomerase, NIMA-interacting 1
TAIR curator summaryphosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds
Alias[PIN1AT]["peptidylprolyl cis/trans isomerase, NIMA-interacting 1"]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg483915 Cytochrome c oxidase subunit Vc family protein
11.6619 Ahg923937 regulatory particle triple-A 1A
13.7477 Ahg950538 myb-like HTH transcriptional regulator family protein
15.2971 Ahg950176 RAN GTPase 3
28.2843 Ahg942565 F-BOX WITH WD-40 2
28.6356 Ahg493213 DEA(D/H)-box RNA helicase family protein
31.9374 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
33.6749 Ahg488853 Protein of unknown function, DUF538
34.1174 Ahg472216 ATPase, F0/V0 complex, subunit C protein
37.2022 Ahg472892
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression