Detail



ID : Ahg950681

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950681|scaffold_802568.1
Sequence
TGAATCCAAT CCCTAATTCG TATGTCAGAT TCTGTGTCCG GCGATTTTCC TCCCGATCCA CTTCTCGCCT CCGGAGCCTT CATCTCCTCC GCCGGTGACG GAACCCTAGA CAGTAGTTCG AAACGGCGGC CGATTCAGGG AGGAATCGGA GTTTCTGGTT CGGGAGAGAG CGTACGCATC GGGATGGCTA ACGGTACCGA TCAGGTGAAT CCATCGCCGG ATAGTTCGAG CCATCAGGCG GAATCGAAGT CGCGGAAGCG TGCGGCGCCT GGAGATAATT GGTTGCCTCC TGGTTGGAGA GTTGAAGATA AGATTCGAAC CTCCGGTGCC ACAGCTGGCT CGGTGGATAA GTACTATTAC GAACCAAATA CAGGGAGAAA GTTTCGGTCC AGGACCGAGG TACTGTACTA CTTGGAACAT GGAACTTCTA AAAGAGGAGG CGCCAAGAAA GTTGAGAATA CTGATTTCCT GTCAGATCAT TTTGAAGGTC AGGGAAGCAA TAGAGCAAGC AGAAAAGCTA AAGAGCCTCC ACCGCCGCCA CCACCATTGG ACTTTGATTT TAAGAATCCA CCAGAGAAGG TAAGCTGGTC TATGGCAAAC GCTGGAGAAG AAGCTTGGGT ACCTATTATT GGGGACGTCA AGGTTAAAGA CTCAGTGAGA CGAGATTGGA GCACTGCGTT TACCTTTATC ACAAACCGAA ACCCAAGTAA ACTGTCGTCT TAAAGACGAT GATGACATGG TGG 
Length743
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17933586.. 17934906
Download Sequence
A.thaliana
AGI-codeAT5G59380.1
Descriptionmethyl-CPG-binding domain 6
TAIR curator summaryProtein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
Alias[ATMBD6][MBD6][methyl-CPG-binding domain 6]
Gene coexpression
MR
MR Locus Description
11.6189 Ahg474587 TBP-associated factor 7
28.1425 Ahg928898 syntaxin of plants 121
39.4208 Ahg476225
41.3159 Ahg485583 phosphate transporter traffic facilitator1
41.5692 Ahg486008 proline transporter 2
43.359 Ahg926625 hydroxyproline-rich glycoprotein family protein
53.1507 Ahg336533 NF-X-like 1
57.6194 Ahg471024
59.4979 Ahg474017 associated molecule with the SH3 domain of STAM 1
68.9783 Ahg944869 O-Glycosyl hydrolases family 17 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression