| Annotation |
|---|
| Description | jgi|Araly1|336533|fgenesh1_pg.C_scaffold_1003098 |
| Sequence |
ATGAGCTCTC AAGTCAGGAG AGATCGGAGA GAGAGGCAAA GATTCACTCC TCAAACTTCT CAGCAAACAT GGGTTCCAAG AGGAACTTCC TCGACCTCTG TGGTTGTAAA CGAGACTCCC TTTCCTTTCG ACGCGAATAC AAATTTTGGA AGCCTTGATG CTGGTGCTAG ACCCGGTCTT GTTTATCAGC AAAGGCAGCA CTATGAGTCT GGCCCTCTGC TTAATAACCC GCACCAAAGG AGTAATGTCT TGGGTCCTCC TCCTTTTAAC CGTCAAAGGA GGAATAATGG TTCGAGAACT GTGCCAGATA ACCGTCAGAG AGGTGGTTCT AGGGGTCACC TGGTCCAGAC TGTGAATAAG GGAACATGGT TGGATAAAGA AAGGAGTGGG CATAAAGAGA ATACTGTGTT GACAGACCCA AATCTGCCTC AACTTTTGCA AGAGATACAG GATAAGCTAA TGAAAGGTTC TATTGAGTGT ATGATTTGTT ATGATATGGT TAGGCGGTCT GCTAATATCT GGTCTTGCTC CAGTTGTTAC TCCATATTCC ATCTGAATTG TATCAAGAAA TGGGCTCGAG CGCCAACTTC GGTGGATTTG TTGGCGGATA AAAACCAAGG TAGTAATTGG AGATGTCCAG GTTGTCAGTT TGTTCAGTTG ACATCGTCAA AGGATATACA GTATCGATGC TTTTGTGGAA AGAGGAAAGA CCCATCTAGT GATCCATATT TGACTCCTCA CTCTTGTGGA GATATATGTG GGAAGCCGCT GGAGAAAGAG TTTGCAACAA CTGCGATGGC TAACGAAAAT ACTTGTCCTC ATGTTTGTGT ATTGCAGTGT CATCCCGGTC CATGCCCTCC ATGTAAGGCA TTTGCCCCAC CTCGTAACTG TCCTTGTGGT AAGAAGATGA TCAGAACCAG ATGCTCCGAA AGAAAATCTA ATCATACTTG TGGGCAGAGT TGCGATAAGC TTCTTTATTG TGGCCGTCAT CGATGTGAAA GGGCATGTCA TGTGGGGCCT TGTGATCCTT GTCAGGTACA AGTCAATGCC TCCTGCTTTT GCAAGCAAAC AGCGGAGAGT GTAATCTGTG GTGACATGAA TGTGAAGGGA GAGGTGAAAG CAGAAGATGG CGTGTTTTCA TGCAAATTGA ACTGTAGAAA ACAGCTTGAG TGTGGTAACC ATTACTGTCG TGATGTTTGC CATCCTGGGT CTTGTGGGGA CTGTGAGTTC CTGCCTAGTA GAATTAAGTC ATGCTATTGT GGGAAAACGA GTTTGGAAGA GGAGAGGCGG AGTTGCCTTG ATCCAATTCC TTCTTGCTCG AACATATGCA GCAAGCTTCT TCCATGTGGC CTGCATAACT GCAAAGAAAT GTGCCATTCA GGTGGTTGTT CGCCTTGTTT AGTCCAAGTG AGCCAAAAAT GTCGGTGCGG CTCAACATCT CGGACTGTGG AATGCTACAA GACAGTTTTA GAGACAGAGA AGTTCATTTG CGCTAAACCA TGTGGCCGTA AGAAAAATTG TGGGAGGCAT AGATGCCATG AGCGGTGCTG CCCTCTCCTG AACCATCCAA AGAATGATGA TCTTTCAGGC GATTTTTTTG ATCTCCACTT TTGCCATATA CCTTGTGGAA AGAGGCTAAG GTGCGGACAG CATTCCTGTG AAACTCTCTG TCACACTGGT CATTGTCCTC CTTGCCTCGA GATGATTTTC ACTGATCTTA CATGTGCTTG TGGGAAAACT TCGATACCTC CTCCATTACC ATGTGGAACG CCTGTCCCGA GTTGTCAGCT TCCTTGCTCG GTTCCTCAGC CTTGTGGCCA TTCCGCTACT CATGGTTGCC ATTTTGGAGA CTGCATGCCT TGTTCAGTAC CCATGGAGAA GAAATGCATT GGTGGTCATG TGGTTCTCAG GAACATACCG TGTGGGTTAA AAGACATTAG ATGTAACAAA ATATGCGGAA AGACAAGGTG TTGTGGCATG CATGCTTGTG CCAGGGCGTG TCACCCTGAA CCATGTGACA ATGGTGGTAA CGCATCTGTA ACTGGTCTAC GTGTTACTTG CGGTCAGACG TGTGGTGCTC CTAGAAGAGA CTGCAGACAC ACTTGTGCAG CACTGTGCCA TCCTTCTGCG TCTTGTCCTG ATCAGAGATG TGAGTTTCCA CTCAAAATTG CTTGTTCATG TGGTCGCATA ACAGCTACCG TCCCTTGTGA TGTCGGAGGA AGTGCTGGTG GTTTTAGCGG TGACTCTATC TATGAAACCT CCATTTTGCA GAAGCTTCCA GTGCCGCTCC AACCTGTCGA GTCAAATGGG AATAGGATTC CTCTTGGGCA GAGAAAGCTT ACTTGTGATG AAGAGTGTGC TAAGGTGGAA CGTAAGCGGG TTCTTCAAGA TGCATTTGAT ATCACTCCTC CAAGTTTAGA CGCTTTACAT TTTGATGAGA ATACTGCCAT GACTGAGATC ATTTCAGATC TTTATAGACG TGACCCTAAG TGGGTGCTAG CAGTTGAGGA GCGATGCAAG TTCTTGGTAC TTGGAAAGGC CAGAGGTAGC ACAAGTAGTT CCCTAAAGCT CCATATCTTC TGTACTATGG AAAAGGATAA AAGAGATGCA GTACGGTTGA TAGCTGAGAG GTGGAAACTT GCTGTAAGCA ATGCTGGGTG GGAGCCAAAA CGCTTTGCAG TGGTTTACGT TACACAGAAG TCAAAACCCC CTACAAGGAT CATTGGAGTC AAAGGTGTTG CCTCAGCAGG CGGGCCCCAC GCACCAGCCT TTGATCCACT GGTTGATATG GATCCTCGAC TCGTGGTTTG TTTTTCTGAT CTCCCAAGGG AAGCTAATAT CAGTGCCTTG GTTCTGAGAT TTGGAGGCGA ATGCGAGCTT GTTTGGTTGA ATGACAAGAA TGCATTAGCC GTCTTCCACG ATCCAGTTCG AGCAGCCACT GCCATGAGAA GACTTGAACA CGGTTCTGTG TACCAAGGAG CGGTAGTTGT TGTACAGAAC CAAGGACAAT CTCCGTCTCT CAGTAACGCA TGGGGAATAC CAGGCAGCTC GGTTAAGAGA GGAAATCCAT GGAATAAGGC TGTGATTAAG GAATCAGATG ACTCTTGGGG AACAGAAGAT TCTCCCATTG GAGGGTCTAT TTTGAAATCA GCAAAGGATA ACGCTTTGAT CACTCCTTTA GTCAACCGTT GGAGCGTTCT CGAGTCAGAT AAGACTGTTT CAGTGGAGCC GCTAGCTCAG ACCGAAGAGA CAAGTAGTTC GAAAGCTGCT GGTAAAGAAC CAGAAGAGAC CGCAGTGGTT GATGATTGGG AGAAAATTAA GAGCAACAAG TTGTCGATAT ATGCTTTGCC TTTCGTTGGC CATTCAAGCA TTTTTTATAA CTTTGTCTCT CCAACTAAAG AAAAGTCAGG TTTTTGGAGC AATAGAAAAG CATGGATTTT ACAACCGAGT GGTCTTAACT TTGTCTGGGG AGGTGACTCG AGATATTGGG TTATCCCTAA AGAACCAAGG TGCCTTCCGA TTCATTCCGT CTTAACCGAT AAACCAAACT TTGGGCTTAC TGATACCAAA AGTCTTAAAC TGATTCATTT GATTGTTGGT TTTAGGATGC CTGCTGAGCT GAAGATGGTG AGTTGGTTAG AGGTAACCGG TTCTTTTGAG AAGATTGAAC CCGCTAAAAC ATACCGAATC GGTTTTAAAA TCTCGTTTAA AACGGATGCG ACCGGTTGGG ATGAAGCCCC AGTTTTCATG TCTGCTAAAA TCGGGAAGAA AGGCAAGACG GTGTGGAAAC GAATCAAATC CGTTAACCAG AACTTTGGTA AACTGAAAGA CGGATCAGAA CCCATCAATA TACCTGACGA GTCCGATGGC CGGTTCGAAA TCTCGGTTAG TCCAGCATCG CTTAACCAAG ATACTATGCT TCAGTTTGGT CTGTATGAAG TGTGGACTGG ACGATGGAAG ACCGGTTTGT TGATCCATGA AGCCTTTGTT CACGAAGTAT AA |
| Length | 4002 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 15710538.. 15715403 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G10170.1 |
| Description | NF-X-like 1 |
| TAIR curator summary | Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response. |
| Alias | [ATNFXL1][NFXL1][NF-X-like 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5 |
Ahg487064 | Pentatricopeptide repeat (PPR) superfamily protein |
| 6.32456 |
Ahg471276 | partner of Y14-MAGO |
| 9.38083 |
Ahg935024 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 16.9706 |
Ahg475645 | splicing factor-related |
| 17.6635 |
Ahg488154 | Auxin-responsive GH3 family protein |
| 19.1311 |
Ahg474074 | Phosphatidylinositol 3- and 4-kinase family protein |
| 23.4521 |
Ahg474021 | Plant protein of unknown function (DUF639) |
| 31.7805 |
Ahg488271 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 32.8634 |
Ahg472173 | 3-ketoacyl-CoA synthase 4 |
| 33.1964 |
Ahg324170 | hydroxyproline-rich glycoprotein family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|