Detail



ID : Ahg951543

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951543|scaffold_803430.1
Sequence
TTTCTTTTTT TGTGATCAGA GATGGATCGA GCTCCAGTGA CAACAGGACC GCTGGATATG CCAATTATGC ACGACAGTGA TCGATATGAC TTCGTTAAGG ATATTGGTTC TGGTAATTTT GGTGTTGCTC GTCTTATGAG AGATAAACTC ACTAAAGAGC TTGTTGCTGT CAAGTACATC GAGAGAGGAG ACAAGATTGA TGAGAATGTT CAAAGGGAAA TAATTAACCA CAGGTCGTTA AGGCATCCTA ATATTGTCAG ATTTAAAGAG GTCATTTTGA CACCGACTCA TCTGGCTATC GTAATGGAAT ATGCTTCTGG CGGTGAACTT TACGAGCGGA TTTGCATTGC AGGACGGTTT AGTGAAGATG AGGCTCGGTT CTTCTTTCAG CAGCTTATAT CTGGAGTCAG TTATTGTCAT GCAATGCAAA TTTGCCATCG CGACCTGAAG CTCGAGAATA CATTGTTGGA TGGGAGTCCT GCTCCTCGAT TAAAAATTTG TGATTTTGGA TATTCAAAGT CTTCTGTTCT TCATTCACAA CCAAAGTCAA CTGTCGGGAC TCCTGCATAC ATCGCTCCGG AGGTTCTGCT TCGTCAGGAA TATGATGGCA AGATTGCAGA TGTATGGTCA TGTGGTGTGA CCTTATACGT CATGTTGGTT GGAGCTTATC CGTTCGAAGA TCCAGATGAG CCTAGAGACT ATCGGAAAAC AATACAGAGA ATCCTTAGCG TTAAATACTC AATCCCTGAT GACATACGGA TATCACCTGA ATGCTGTCAT CTAATTTCAA GAATCTTTGT GGCTGATCCC GCTACTAGAA TTAGCATTCC AGAGATCAAA ACCCATAATT GGTTCTTGAA GAATCTCCCA GCTGATCTAC TGAACGAGAG CAACACAGGA AGCCAATTTC AGGAGCCTGA ACAACCAATG CAGAGCCTTG ACACAATCAT GCAAATCATC TCTGAAGCCA CAATTCCCGC TGTTCGAAAC CGTTGCCTAG ACGATTTCAT GACAGACAAT CTTGATCTTG ACGATGACAT GGATGACTTC GATTCTGAAT CTGAAATCGA CATTGACAGT AGCGGAGAGA TAGTTTACGC TCTCTAATAA AAAAAAACTT TTTTAATGAC C 
Length1131
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21189488.. 21191623
Download Sequence
A.thaliana
AGI-codeAT5G66880.1
Descriptionsucrose nonfermenting 1(SNF1)-related protein kinase 2.3
TAIR curator summaryencodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.
Alias[SNRK2-3][SNRK2.3][SRK2I][SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3][sucrose nonfermenting 1(SNF1)-related protein kinase 2.3]
Gene coexpression
MR
MR Locus Description
14.4222 Ahg902826 glutathione S-transferase phi 8
15.748 Ahg485090 RING/U-box superfamily protein
17.3205 Ahg486755 Adenine nucleotide alpha hydrolases-like superfamily protein
17.4929 Ahg485399 SNF1-related protein kinase 2.2
22.383 Ahg482959 alpha/beta-Hydrolases superfamily protein
28.9828 Ahg481034 cold, circadian rhythm, and rna binding 2
31.4643 Ahg493915 PQ-loop repeat family protein / transmembrane family protein
36.9459 Ahg493329 EamA-like transporter family
37.5233 Ahg484447 CCR-like
38.0789 Ahg474290 Amino acid dehydrogenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression