Detail



ID : Ahg951631

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951631|scaffold_803518.1
Sequence
AGTAACATCA TCGGATAGAG ATGGCTAGAT ACGATCGAGC AATCACTGTC TTCTCCCCCG ACGGTCACCT CTTTCAAGTC GAATACGCCC TTGAAGCCGT CCGCAAGGGT AACGCCGCCG TCGGTGTCCG CGGTACCGAC ACCGTCGTCC TCGCCGTCGA GAAGAAATCT ACCCCCAAGC TTCAGGATTC TAGATCAGCC AGAAAAATTG TGAGCCTTGA CAATCACATT GCCTTGGCAT GCGCCGGGCT CAAGGCAGAT GCCCGTGTCT TGATTAACAA AGCAAGGATC GAGTGTCAAA GCCATAGGCT TACACTAGAG GACCCTGTCA CTGTTGAGTA CATCACTCGC TACATTGCTG GCCTTCAACA GAAGTATACC CAAAGTGGTG GTGTCAGACC TTTCGGTCTT TCTACTCTTA TCGTTGGCTT CGACCCTTAC TCTCGTCTGC CTTCCCTATA TCAGACTGAT CCTTCTGGCA CTTTCTCTGC TTGGAAAGCT AATGCAACCG GCAGAAACTC CAACTCAATT AGGGAATTCC TGGAGAAGAA CTACAAAGAA TCCTCTGGCC AAGAAACTAT TAAACTCGCT ATCCGTGCTC TTCTTGAGGT AGTTGAGAGT GGAGGAAAGA ACATTGAGGT TGCTGTAATG ACACGGGAGG AAACTGGTCT GCGCCAGCTA GAAGAAGCTG AAATTGATGC AATCGTGGCC GAGATCGAAG CTGAAAAGGC GGCCGCAGAA GCAGCCAAGA AAGGCCCTCC AAAGGAAACT TGATAAAACA ATAACTCAAT TCA 
Length793
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21484646.. 21485846
Download Sequence
A.thaliana
AGI-codeAT5G66140.1
Descriptionproteasome alpha subunit D2
TAIR curator summaryEncodes alpha5 subunit of 20S proteosome complex involved in protein degradation.
Alias[PAD2][proteasome alpha subunit D2]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg496800 indole-3-acetic acid inducible 9
8.48528 Ahg489030 calmodulin 6
10.198 Ahg942896 Phosphoenolpyruvate carboxylase family protein
12.083 Ahg484985 RAB GTPase homolog 8A
20.3715 Ahg950295 calmodulin-binding protein
25.632 Ahg491515 pantothenate kinase 2
28.1425 Ahg492695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28.9828 Ahg493091 Peptidase M20/M25/M40 family protein
36 Ahg945681 NAD(P)-binding Rossmann-fold superfamily protein
46.4543 Ahg935720 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression