Detail



ID : Ahg484985

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484985|fgenesh2_kg.5__977__AT3G46060.1
Sequence
CTCTCTTTTT CTGCGCACTC CTTCGTTTCC AACTAACGTG CGCAGTGAAT CCTATCGTGC ACGCGAAGCA GACGAAAGAA GTAAAATAGA AGAAGCCGGG AAAAAAAAGC TAAATCGGGA CTGGCGCATT TTAGCCGTCC GCCATAACCT TCGCTCTTCG CTCTCTGATT CTTCCGATTA CATCGGTTTT CTTCTCCGTC CGATTCAATG GCTGCTCCTC CTGCTAGAGC CAGAGCTGAT TACGATTATC TCATTAAGCT TCTTTTGATT GGAGATAGCG GTGTTGGTAA AAGTTGTCTT CTTCTACGTT TCTCTGATGG ATCTTTCACC ACTAGCTTCA TTACCACCAT TGGTATTGAC TTTAAGATAA GAACGATTGA GCTTGATGGT AAACGTATCA AGCTTCAGAT TTGGGATACT GCTGGTCAAG AGCGGTTTCG GACTATCACC ACTGCTTATT ACCGTGGGGC AATGGGCATT TTGCTGGTGT ATGATGTCAC AGACGAGTCA TCCTTCAACA ACATTAGGAA CTGGATTCGT AACATCGAAC AGCATGCTTC AGATAATGTT AACAAGATCT TGGTAGGGAA CAAGGCTGAC ATGGATGAAA GCAAGAGGGC GGTACCTACA GCAAAGGGTC AAGCTCTTGC TGATGAGTAC GGAATTAAGT TCTTTGAAAC AAGTGCCAAG ACAAACCTAA ACGTGGAAGA AGTTTTCTTC TCAATAGGGA GGGACATTAA GCAGAGGCTT TCAGACACCG ACTCGAGGGC AGAGCCTGCA ACTATCAAGA TAAGCCAAAC GGACCAGGCA GCTGGAGCCG GGCAGGCCAC ACAGAAATCT GCATGCTGTG GAACTTAAAA TTTAAGTCGA AAAAAAGTTT GGGGTGAAGT GAAAAAACTA AGATCGTTGG GTGCTTTTGT AATTTTTGTT TTATGCCAAC ATTTCTGATT CGTTCTAAAT TGTCCTTCCT ATTTGTACGA AGGTTTAATC GAAACATGTA TTTTTTTTCT TTCTCTGTTG CTGATTTTTA ATGACGGTGA CTGAATTGTT ATGTTGGTCA TCACTTCTCT CTATATATCT TTCTCTTGCT TCCTCTTTTA TC 
Length1102
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11760700.. 11763114
Download Sequence
A.thaliana
AGI-codeAT3G46060.1
DescriptionRAB GTPase homolog 8A
TAIR curator summarysmall GTP-binding protein (ara-3)
Alias[ARA-3][ARA3][ATRAB8A][ATRABE1C][RAB8A][RABE1c][RAB GTPase homolog 8A]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg476882 chromatin protein family
6.9282 Ahg475301 pre-mRNA processing ribonucleoprotein binding region-containing protein
7.2111 Ahg470409 TRAF-like superfamily protein
10.583 Ahg491547
11.0454 Ahg484547 Sucrase/ferredoxin-like family protein
11.225 Ahg493647 yeast YAK1-related gene 1
11.4891 Ahg474357 Coatomer, beta' subunit
12.083 Ahg951631 proteasome alpha subunit D2
12.9615 Ahg487638
13.6015 Ahg942641 SNARE-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression