Detail



ID : Ahg951910

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951910|scaffold_24900002.1
Sequence
GATTCAATCA ACTATCAAGC AATGGCATCG ATGACCATGA CCGCTACTTT CCTCCCGGCC ATCGCCAAGC TTCCCTCAGC CACCGGCGGA CGAAGGCTCT CGGTAGTCAG AGCCTCCACG AGCGACAACA CACCCAGCTT ACAAGTCAAG GAACAGTGCA GCACCACAAT GAGGAGGGAC CTCATGTTCA CGGCTGCAGC TGCAGCGGTT TGTTCTTTGG CTAAAGTAGC CATGGCTGAA GAAGAAGAGC CCAAGCGAGG GACAGAGGCG GCCAAGAAGA AATACGCACA AGTTTGTGTC ACAATGCCTA CGGCCAAGAT CTGCCGCTAC TGATTCAACA AACCACCTTC TTCATGCCTA TCCCTCTCTT TCAATTTCGG TAAATTTTCT CAATTAAGTT TGGTCTGTAA TCG 
Length413
Protein Sequence
Protein Residue
Map Locationscaffold_249: 2318.. 2730
Download Sequence
A.thaliana
AGI-codeAT3G21055.1
Descriptionphotosystem II subunit T
TAIR curator summaryEncodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc).
Alias[PSBTN][photosystem II subunit T]
Gene coexpression
MR
MR Locus Description
3 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
3.4641 Ahg474689 Phosphoglycerate kinase family protein
3.60555 Ahg474626 photosystem I subunit G
6 Ahg492755 photosystem II subunit QA
6.16441 Ahg489709 ascorbate peroxidase 4
6.245 Ahg477371 carbonic anhydrase 1
6.32456 Ahg476582 Pyridine nucleotide-disulphide oxidoreductase family protein
7.93725 Ahg486407 enzyme binding;tetrapyrrole binding
8.60233 Ahg939592
8.83176 Ahg470332 photosystem II family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression