Detail



ID : Ahg471443

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471443|fgenesh2_kg.1__1397__AT1G12900.1
Sequence
ATGGCTTCGG CTACTTTCTC TGTGGCCAAA CCATCTCTTC AGGGTTTCTC TGAGTTCTCA GGACTCCGAA ACTCCTCTGC TCTTCCCTTT GCCAAGAAAT CTTCTTCCGA TGAGTTTGTT TCCTTCGTCA GTTTCCAAAC TTCTGCAATG GGAAGCAATG GTGGATACAG GAAAGGAGTG ACCGAGGCCA AGATAAAGGT AGCCATCAGT GGGTTCGGTA GGATTGGTAG GAACTTCTTG AGGTGTTGGC ATGGTCGTAA GGACTCTCCT CTTGATGTCG TTGTCATTAA CGACACTGGT GGTGTTAAAC AAGCATCACA TCTCCTCAAA TACGACTCAA CTCTTGGAAT CTTTGACGCT GATGTCAAAC CTTCTGGAGA TGCAGCTCTC TCTGTCGATG GAAAGATCAT CAAGATTGTA TCTGATCGTA ACCCATCTAA TCTCCCCTGG GGGGAACTAG GCATTGACTT GGTTATCGAA GGAACCGGAG TGTTTGTTGA CAGAGATGGT GCTGGAAAGC ACCTTCAGGC TGGAGCCAAG AAGGTTCTAA TTACTGCACC TGGAAAAGGT GACATCCCAA CTTATGTCGT TGGCGTCAAT GCTGAACTTT ATAGCCATGA AGATACAATC ATCAGCAATG CGTCTTGTAC TACTAACTGT CTCGCTCCAT TCGTCAAGGT TCTTGACCAG AAATTCGGGA TCATAAAGGG TACAATGACA ACTACTCACT CATACACTGG TGACCAAAGG TTGTTAGATG CGAGCCACCG TGATCTAAGG AGAGCAAGAG CAGCAGCTTT GAACATTGTT CCAACATCTA CAGGAGCAGC CAAAGCTGTG GCTCTTGTGC TTCCTAACCT CAAAGGAAAA CTCAATGGAA TCGCATTGCG TGTGCCAACT CCAAACGTTT CAGTGGTTGA CTTAGTCGTT CAGGTCTCCA AGAAGACTTT TGCTGAAGAA GTCAATGCTG CTTTCAGAGA TGCAGCTGAG AAAGAGCTTA AAGGTATACT CGACGTCTGT GATGAGCCTC TTGTCTCTGT TGACTTCAGG TGCTCTGATG TATCCTCAAC TATTGATTCT TCTCTCACAA TGGTTATGGG AGATGATATG GTTAAAGTGA TTGCTTGGTA TGACAATGAA TGGGGTTACT CGCAGAGAGT CGTTGATTTG GCTGACATTG TTGCCAATAA CTGGAAGTGA AGACTCAACT TTTGATGTCT GCTCCATTAT TTTTTTACTG TTATATGATT CGGAATGTAT AATTGTAGTT CCTGAGTTTA TTATGTCTTT GTGCTCTATA AATTGTAGTA ATAAACTTGA TTCAAACATG TTACATCCTC TGCTTAAT 
Length1348
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5096209.. 5098027
Download Sequence
A.thaliana
AGI-codeAT1G12900.1
Descriptionglyceraldehyde 3-phosphate dehydrogenase A subunit 2
TAIR curator summary
Alias[GAPA-2][glyceraldehyde 3-phosphate dehydrogenase A subunit 2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg484431 glyceraldehyde 3-phosphate dehydrogenase A subunit
3 Ahg951910 photosystem II subunit T
6.78233 Ahg489817 ATP synthase delta-subunit gene
6.78233 Ahg489877 light harvesting complex of photosystem II 5
7.81025 Ahg492328 magnesium-protoporphyrin IX methyltransferase
8.77496 Ahg476582 Pyridine nucleotide-disulphide oxidoreductase family protein
8.94427 Ahg492755 photosystem II subunit QA
10.3923 Ahg477371 carbonic anhydrase 1
10.6771 Ahg472262 Cupredoxin superfamily protein
11.0905 Ahg477375 cyclophilin 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression