Detail



ID : Ahg952368

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952368|scaffold_6400002.1
Sequence
CCAAACCCTA GGAAAAAACA ATGACGGCGA CACAAATGCT GCTTCATCTT CTTCTTCTTC CACTTCTCTT CGTTTGCTTC AGTAACCAAG TAGGAGCAGA ACTTACCGAG GAGTTAACGA CATTGCTGGA GGTTAAAACA GAGCTAGACC CAGAAGACAA ACACTTAGCT TCATGGAGTA TTAATGGAGA TCTGTGTAAA GACTTTGAAG GTGTTGGTTG TGACTGGAAA GGACGAGTTT CTAACATATC TTTACAAGGG AAAGGATTGT CTGGTAAAAT CTCTCCGAAC ATTGGAAAGC TTAAACATTT GACGGGTTTG TTCTTGCATT ACAATGCTCT TGTCGGAGAC ATTCCTAGAG AACTTGGTAA CTTGTCTGAG CTTACGGATC TTTATCTCAA TGTTAATAAT CTCTCCGGTC AGATTCCTTC AAACATTGGG AAGATGCAAG GCTTGCAAGT TTTGCAGCTC TGTTACAACA ATTTGACAGG AAGCATTCCT AGGGAGCTTG GTTCACTGAG GAAGCTGAGT GTTCTTGCTC TTCAATCTAA CAAACTCACT GGAGCTATAC CTGCGAGTTT AGGAGAGATA AGTGCTCTAG AGCGTCTAGA TTTGAGCTAC AATCACTTGT TTGGTTCTGT ACCAGGCAAG TTAGCTAGCC CTCCTTTGCT TCGAGTTCTC AACATCCGAA ACAACTCCCT CACTGGCAAT GTACCTCCTG TACTGAAGAG ATTGAATGAA GGTTTTTCTT TTGAGAACAA CTTGGGGCTA TGTGGAGCTG AATTTTCACC TTTGAAATCT TGCAATGGCA CAGCTCCTGA GGAACCTAAG CCGTACGGTG CAACTGTGTT TGGTTTTCCA TCCCGGGATA TACCAGAATC AGCTAATCTT CGGTCACCTT GTAATGGAAC AAACTGTAAT GCTCCTCCAA AATCTCACCA AGGTGCAATC CTTATCGGTT TAGTTGTTTC GACTATCGCC TTGTCTGCTA TTAGCATCCT CTTGTTCACG CATTATCGCA GACGCAAACA GAAGCTTTCA ACTGCTTATG AAATGTCGGA CACTCGTGTC AACACCGTAG GAGGAGGCTT TAGGAAGAAC AATGGTTCTC CATTGGCCAG TCTTGAATAT ACCAGTGGTT GGGATCCTCT TTCAGACAAT AGGAATCTTA GTGTCTTTGC TCAAGAAGTT ATCCAGAGCT TTCGATTTAA TCTAGAAGAG GTTGAAACTG CTACACAGTA TTTCTCAGAA GTGAATTTGC TTGGAAGAAG CAACTTCTCT GCGACTTACA AAGGAATCTT GAGAGATGGT TCGGCTGTAG CGATCAAACG GTTTAGTAAA ACCAGTTGCA AATCCGAAGA ACCTGAGTTC TTGAAAGGAG TCAACATGTT GGCGTCTCTG AAACATGAAA ACTTGGCAAA ACTTAGAGGT TTCTGCTGTT CAAGAGGCCG TGGAGAATGC TTTCTGATCT ATGATTTTGC TCCCAATGGA AATCTTCTGA GCTATCTCGA TCTCAAAGAT GGCGATGCAC ATGTTCTTGA CTGGTCCACG AGAGTATCCA TCGCTAAAGG CATCGCAAAA GGGATTGCTT ATCTGCATTC ATACAAAGGA AGCAAACCAG CATTGGTTCA CCAAAACATC TCAGCGGAGA AAGTCCTAAT CGACCAGCGA TACAATCCGC TACTCTCAAA CTCAGGCCTC CACACGCTTC TCACAAACGA CATTGTCTTC TCTGCACTCA AAGACAGTGC AGCAATGGGC TATCTCGCCC CAGAATACAC CACAACAGGA CGTTTCACCG AGAAAACGGA TGTCTACGCT TTCGGGATTC TTGTGTTTCA GATAATCTCC GGGAAACAGA AGGTTAGACA TCTTGTTAAG CTTGGAACTG AAGCTTGTAG GTTCAATGAT TACATCGATC CAAATCTTCA AGGAAGATTC TTTGAATATG AAGCCACAAA GCTAGCTAGA ATTGCTTGGC TGTGCACTCA TGAATCTCCC ATTGAAAGAC CATCCGTGGA AGCTGTTGTT CATGAGCTCG GTAACTGTAG TAGCTGTCTC TGAGAACTCT CTTGAGGCCA ATTT 
Length2084
Protein Sequence
Protein Residue
Map Locationscaffold_64: 4044.. 6975
Download Sequence
A.thaliana
AGI-codeAT5G51560.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.7238 Ahg485285 IQ-domain 21
12.5698 Ahg477690 Li-tolerant lipase 1
17.3205 Ahg930945 Phospholipase A2 family protein
17.3205 Ahg945946 SKU5 similar 4
18.8149 Ahg480193 O-Glycosyl hydrolases family 17 protein
22.8473 Ahg491249 Leucine-rich repeat protein kinase family protein
23.622 Ahg495241 subtilase 1.3
24.6577 Ahg491877 GDSL-like Lipase/Acylhydrolase superfamily protein
24.6779 Ahg470654 Fatty acid desaturase family protein
25.8844 Ahg472662 MLP-like protein 423
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression