Detail



ID : Ahg952683

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952683|scaffold_900034.1
Sequence
CTTCTTTATT CAGCAATCTA ATTCATGCCA GAACGAATCA AGGAAAAACT TATGAAGAGA CCAGTTACAG GAAAAGATCT TATGATAGTC AATATGGGAC CTCACCACCC ATCCATGCAT GGTGTTCTTC GCTTAATTGT TACTCTAGAT GGTGAGGATG TTGTTGACTG TGAACCCATA TTAGGTTATT TACACAGAGG AATGGAAAAA ATTGCAGAAA ACCGAGCAAT TATACAATAT TTACCTTATG TAACGCGATG GGATTATTTA GCTACTATGT TTACAGAAGC AATAACAGTA AATGGACCAG AACAATTGGG AAATATTCAA GTTCCTAAAA GGGCCAGCTA TATCAGAGTA ATTATGCTGG AATTGAGTCG TATAGCTTCT CATCTGTTAT GGCTCGGCCC TTTTATGGCA GATATTGGTG CACAGACTCC CTTTTTCTAT ATTTTCAGAG AACGAGAATT TGTATATGAT CTATTCGAAG CTGCCACCGG TATGAGAATG ATGCATAATT TTTTTCGTAT TGGAGGAATA GCGGCTGATT TACCTTATGG TTGGATAGAT AAATGCTTGG ATTTTTGTGA TTATTTTTTA ACAGAGGTTG TTGAATATCA AAAACTCATT ACACGAAATC CTATTTTTTT AGAACGGGTT GAAGGAATTG GGATTATTGG TGGGGAAGAA GCAATAAATT GGGGTTTATC CGGACCAATG CTACGCGCAT CCGGAATACC ATGGGATCTT CGTAAAGTTG ATCGTTATGA GTCTTACGAT GAATTTGAAT GGGAAATTCA GTGGCAAAAA CAAGGAGATT CATTAGCTCG TTATTTAGTA CGACTTAGCG AAATGACAGA ATCCATAAAA ATTATTCAAC AGGCTCTGGA AGGACTTCCA GGGGGTCCCT ATGAGAATTT AGAAAGCAGG GGCTTTGATA GAAAAAGGAA TCCAGAATGG AATGATTTTG AATATCGATT CATTAGTAAA AAACCTTCTC CTACTTTTGA ATTATCGAAA CAAGAACTTT ATGTAAGAGT TGAAGCTCCC AAAGGGGAGT TGGGAATTTT TCTCATAGGA GATCAAAGCG GTTTTCCTTG GAGATGGAAA ATCCGACCAC CGGGTTTTAT TAATTTGCAA ATTCTTCCTG AACTAGTTAA AAGAATGAAA TTGGCTGATA TTATGACGAT ACTCGGTAGC ATAGATATAA TTATGGGAGA AGTTGATCGT TAAAATGATA ATTTATGCAA CAGCAGTCCA AACTATAAAT TCTTTTGTTA AATTGGAATC TTTAAAAGAG GTCTATGAAC TCATATGGAT ATTTGTCCCT ATATTTTCTC TTGTATTGGG AATCATAACA GGTGTACTAG TAATTGTGTG GTTAGAAAGA GAAATATCTG CAGGGATACA ACAACGTATT GGACCTGAAT ACGCCGGCCC GTTGGGAATT CTTCAAGCTC TAGCCGACGG GACAAAACTA CTTTTCAAAG AAAATCTTCG TCCATCTAGA GGAAATACTC CTTTATTTAG TATTGGACCA TCTATAGCAG TTATCTCTAT TTTACTAAGT TATTCAGTAA TTCCCTTTAG CAATCACCTT GTTTTAGCGG ATCTCAATAT CGGTATTTTT TTATGGATTG CCATCTC 
Length1647
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1606454.. 1608100
Download Sequence
A.thaliana
AGI-codeATCG01110.1
DescriptionNAD(P)H dehydrogenase subunit H
TAIR curator summaryEncodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4.
Alias[NDHH][NAD(P)H dehydrogenase subunit H]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg475584 ATP synthase subunit alpha
4.24264 Ahg925485 DNA-directed RNA polymerase family protein
4.24264 Ahg925484 RNA polymerase subunit beta
4.47214 Ahg333071 NADH dehydrogenase family protein
5.47723 Ahg952685 Ribosomal protein S7p/S5e family protein
6.9282 Ahg925489 ATP synthase subunit C family protein
10.9087 Ahg475553 ribosomal protein S11
11.3137 Ahg912921 ribosomal protein S19
11.3137 Ahg907854 ribosomal protein S19
12.49 Ahg915218 chloroplast ribosomal protein S15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression