Detail



ID : Virus0061

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionHibiscus_bacilliform_virus_GD1|plants|Retro-transcribing
Sequence
TGGTATCAGA GCATGGTTTC CGATAGTCAT GTCCGGCTAA AAACCTTTCA AGGTCTGGGG AAATAGAGGA GAAGTGTGTA GCTGGGAAAT ACTGTTTTTG TACTATTCTT CCTGTCAACC AAAATAATTG AGTCTTCCTG TAGTAGTTGG GCTAAAAGGG CAAAAGGCGA AGGCACTATA TGGTGTTAGG CAAGGAGGCC GTTAACCTGA ACCCCGGAGA TGAGTCTTTT TAGTTAACAA ACCAGGGGAA GCAATTATGA GTAGGAGATG GGAGGAAGAA ATACAGAAGT GGTATGAACA GTCAAGCACT TCAAGTCTAG AGTACCTAGA TCTTGCTTCA ACATCAAAAG TTTCAAACCA ACAATTAGCT CACAATCTCT CTGTTATTTA CAACCATAGT AGTCTTTCAT CCAGAGTCCA AATCAAAAAT TACAAAAAGA TTCAAGAGTC CCTAGATAGT ATTGAGTCTC GAATCTCAAA GCTTGAAAGT AATCTCAAAA ACTTAACCAA AACCTTCATT GCAAATAGAC CTTTAACCCA GGCTGAGGTC ACTACCTTAG TCTCTGAAAT TAGCCAGCAG CCAAAGTTGG TAGAAGCCCA AGCTCTCCAA CTCACAGAAG ATCTCAACAA AAAGCTAACG AGGGTTGAAA AACTTTTGCA CAAGCTAGAG CAGTGGTCCC AGTCTTGATG AGCCACAGCC GTACCAGGGC AACTGCAAGC TACAAAGAAG CAGTCGCAGC CACTGAAGAC ATCCAGCCAC CAGCAGTTGG ATTTGCCAAA CCATCTGACA ACGTAGGAGC TCAATCGTCA AGTTCTGTTA TCATCAAGCA GAATAACACG ATTATACAAC TGTTAGCTTC TCTTTCTGAA AAAGTTAACA CGCTTGAAAC AGAGGTTAGA CACATCAAAA ACGTGTTTGA CTCTCGTGAG CCCTCTACAT CAACGTTACC AACAGACCTG ATTGAAAAGC TAGAAGGACT GACGCTTACA GACAAACAGG AACGGCCAAA AGAGAGAAAG GGAACCCTTT TTGCTTTCAA GGACCCTTAC GTGATTCTCC AGGAAGAAAA AGAGAAACTG AAAAAGGCGA CATGAGTACT ACAACTACTC AGACGGTACC ACCAGTCACG AGAAACGCCA CTAGAAGGCA GCAAGGAGAA AGAGAGACTC CTCTCTTTGA GGACCAGATT CGTGACTACC GTAACAGCCA AAGACGCGCC TATACAACAC AAAGAGCTGT GAGAAGGCTC AGGAGAAGAA TTACCGGCCG ACAACCATAT CAGGAAACTC TGGAGCAGGA AGTTGACCCA CAAGCAGACC TCCAGATGTC CATGCAAGAA CGGGCAAGAT TAGTACCAGC TGAGGTATTA TACAGATCCA GGAGAGACAC GATTCACCAT CGTGTTTACA GTCATAGATC GGAGGAAGCA ATCCTTTGTA CAGATGGGAA TCAGGTGGAT AGAACTTTTA TCCAGCCTGA AAGTATGGAA GCCCTACAAA GGACAGGCAT ATCCTTTATT CATATAGGGA TTATGCAAGT TAGACTACAG ATTCTTCACC GGCAGAATGA AGGAACCATG GCTTTAGTCG TCTTCCGGGA TACAAGATGG AATGGAGACC AGTCAATCTT TGCAACCATG GAGGTAGATC TGACTGAGGG AAGACAAATC ATCTACGTTG TACCAGACAC CATGATGACC ATTGGTGATT TTGCAAGAAA TATACAGATA TCCATACTAA CCCGTGGATA TTCTAACTGG CAGAATGGTG AGGCAAATCT CTTAGTAACA AGAGGCATAG TTGGGAGACT ATCCAATACT CCTAACGTTG CTTTTGCCTA TGAGATTGGC AACGTAACTG ACTACCTGAC AAGCCAAGGA GTACAAGCCA TAGCAGGAAG GAGATATGAC AGCAGGGAGT TGCAGAACCA GCAGTGGATC TTAAGACCTC CACAGGTGGA AAGATTGCCA CAAGCACCGA AAAACGTTGA CACAAGAAAT CTCATTGATG GTTCAATATC TTTGAGATTT AGAGATTATG CAACAACCTC AACACCAGAG CTACCATCCT ACAACGAACA GGATGAAGAG GTGGACCCAG ATGAGGAGCA GCTGATGGAA CATGTAGTAG CTGCCTTTGT AGAGGAAGAA CCCAAGGAAA TTTGGGACAC ACTGGGACAA CCTTCTGGGA AGTTTGACTT CCTGGTAAAA TATTCAGCAC CGGCATCCTC GAAGATCAGG ATTGAGGATA TTGTTCCCAC CGGATGGGGT GATGAATGGG AACAACCGGA ACAGCAACAA TCGCCACAGC AACAACAACT ACTATCATGC TCTCAGGAGG AGAGTGATGA TGAGGATGAT TGGGTTTCCA GATTTCAATT TCTGGCCCAA TTTGATGAAG AACCAGCCAC TCAACCACAG AGCCCACAAA GCCCAACATG GTATAACCCA TTTGCAGAAG GTGGTGGGAG TGATGAAAAT GATGAAAACC CAGACCCAGA AGAAAGTGAA GAAATGGGTA ATGAAATGGG TTATGAAACG GAGGTGGAGG AACAGGAAGA GAAGGTAGCC ATGATACAAG AAGATCCAGA CTTGCTACCA TACCCTCACC TAAGGGAACT GCTGAAAAAT GAAGAAAAGG TGTTTTCAAC ACAGCAATCG GAAGTGAGCA GTTACCGACC ACCTCAAGAT ACAGCAATGA CTCCAGCAGG ATATGCACCA GCAAGAGGAG AGGCATCATC CTCTACGCAT CAACCCATGT TTGAAGGGTA TATGCCAAGA AGACCACAAT TCAAGCAAGA CAGATCAACG GAGTACTGGC AATTCCCAAC AGCACAGGGA CAAACAGGAG CCATGTTTGT CATTCCCAGA CAGATTGGCT TATTTCATGA TGCGTTCAAC AGATGGGAGT CTATAACAAA GAACTATGTT GCTTCCCAGG GATTTACTGA TTCTAAAGAC AAAGCAGAAT TCATGGAAAA TTTGCTTGGA GAAACGGAGA AGCTAACATG GGTTCAATGG CGAATGAACT TTCCTACAGA ATACCAGGAG ATGGTAAACG CAGCTGATGG TAGGGAAGGG ACGCAGAACA TACTCTCTCA AATGAGGAGA GTATTCACTC TTGAAGATCC TACAACTGGA TCTACTGCAG TACAGGACGA GGCATACAGA GACTTGGAGA GGCTAAGCTG CACCAACATC AAAGACATAG TCTCCTTTTT AAATGACTAT GCAAGACTTG CAGCAAAATC GGGAAGGATG TTCATCAGCC CAGAATTATC AGAAAAGCTC TGGTTGAAGA TGCCTTATGA TTTGGGGAAC AAAATACGTA CTGCATACGA GGCAAAACAT GAGGGAAACA CTATTGGTGT TTTCCCAAGG ATCCTATTCA CATACAAGTA CCTGGAGCAA GAATGCAAGG AGGCAGCATT CAGGAGGTCT CTGAAAAATT TATCTTTCTG TTCAGAGATG CCATTGCCAG GATACTATGG AGAAAAGAAG CGCTACGGTG TAAGAAGGTC AACAACATAC AAAGGAAAGC CACACCCAAC ACATGCAAGA ATTGAGAAGC AGAAACACCT TGTCAGAAAT AAAAGGTGTA AATGTTATTT GTGTGGAGAG ATGGGGCACT TTGCCAGAGA ATGCCCTAAT GACAAGAAGA ATACACGCCG AGTAGCCATG TACGAGCAAC TGAACATACC AGAAGGATTT GAGGTAGTGT CAGTTGAAGA AGGAGAAGAG GTCAGTGATG CTATCTTCAG CATCTCTGAA AATGAAGATG AAGATGCCCT GCACACAGGC GGAGCCTTTG CTGAAACTAT CTTTATGTTT CATGAAGGCA CAGACAATGT TTATTGGGCA GGAAAGAAGG ATGGTTACCT CCCATACAAG AGGATAACCA GGGAACAATT CCAGTGTGAG CATGAATGGC AGATGAACCA GGAAGTAGCC ACTGTGGAAC TGGAAAAATG TTCCTTTTGC AAGCAAGAAA CCAGGAGGAG GATGAGACTG CATTGCCCTA AATGCAGAAT TACAAGTTGT GTCCTCTGCA GCAGTAATTA CTGTGGTATT GCAATCAAAC CAGAACCTGT ACAGACCAGC TTCTTCAATG AGAAGAGTCT GTTAACCCAA CAGCAAGAAT ACATTGCATA CCAGACTGCT GAAATCAAGA AGCTTCAGGA GCAGTTAAAA CAAACAGAAG AAAAACTGGC AGAAGCTGAA AGAAAAATCA GGGGATACGA GAACATGGAA GTCCTAGAGA AAGAAAGAAA GGAAATGGCG CTGAAAGATA TGCAGAGAAA AATTGATGAA GAAATAAAGA AAGCAGCCAT GCAGGAACTT CCAACTGAAA AGGAGCTGTG GGAACAACGA GAAGGAAAAG CCCACATTGC AGGAGCTGTA ATAGCAGCAT CAACAGAAAC TGGAAGAGAA GAAAGAAGGC CAGTCAAAGG GAACATGCTA TACAACATGG ACGTAGAAAT AGACATACCG TCTGTTCCAA GGTTCACTGT TAAAGCAATC CTGGACACCG GAGCAACGTC GTGCTGCATC AGTATGGATA AGATACCAAA AGCAGCCATC GAGCCTAATA CTTTTGAAGT AACATTCAGA GGTATTAATT CTGTGCAGAA GAGTAACAAG AAGCTGAAGT ATGGCCAGAT GAGAATTGGA GGACATATGT TCAGAATACC CTACACCTAC TGCTTTGAAT CACTGACATT GGGAGATGAT GTGCAGTATG TTTTGGGTTG CAATTTTATC AGAAATATGC ACGGAGGAGT CAGGCTTGAA GGAACAGAGG TGACGTTCTA CAAAAATATC ACCACCATTC AGACAAGATT AATGGCGCCA ATCGTTGAAG AAGATGATGA AGACGATGAA GTGGAGCAGG AGACTAACTG GATTAGAACC ATGGCATCAT CAACAATGGA CGCTCCATAT GAGAAGCTGA GGAGCAGCTT TGGCCCATTA ATGAAGGAGT TAAAAGACCA GGGGTACATT GGTGAAAATC CAATGAAACA TTGGGCTCGG AACAAAGTAC TGTGCTATCT GGACATCAAA AACCCAGATA TGGTGATAGA GGATAAGCCC ATTAAACACG TGACGCCCCA GATGGAGGAA TCTTTCCGGA AACATATAAA GGGCCTGTTG GAACTGAAGG TGATTAGGCC CAGCACTAGT AAACATCGGA CCACAGCCTT CATTGTCAAC TCAGGCACAA GCGTGGATCC AGTAACCGGA AAAGAGACCA AAGGAAAGGA GAGAATGGTG TTCAACTACA AAAGGCTGAA TGATCTCACT GAGAAAGATC AGTACAGTCT GCCAGGCATC AACACCATTA TGAAGAGGGT TGGCCATGCT AAGATCTACT CAAAGTTTGA TCTCAAGAGT GGATTTCATC AGGTGGCTAT GCACCCGGAG TCTATCAAGT GGACTGCTTT CTGGGTTCCA GATGGACTGT ATGAATGGCT AGTTATGCCA TTTGGACTTA AAAACGCCCC AGCAGTATTT CAGCGAAAGA TGGACAACGT CTTCAAAGGT ACTGAAGCCT TTATCGCTGT ATACATTGAT GACATACTCG TATTTTCCCA GTCTGAGGAG GAACATATCA AGCACATACG GGTCATGTTA GAAAAATGCC GGGAGAATGG GCTTGTTCTT AGCCCAACAA AAATGAAGAT AGCCCAGAGG AAGGTGGAAT TTCTGGGAGC TATTCTGGAA GCAGGCCGTA TTCAGCTGCA GCCCCATATC ATAAAGAAGG TCGTGAACTT CAAAGACGAA GACCTGCAGG AAACGAAGGG CCTCAGATCC TTTTTGGGCC TACTTAATTA TGCCAGAGCA TATATCCCAC AAATGGGTCG TCTGCTAAGC CCATTATATG CCAAGGTGAG CCCTAAAGGA GAGAAGAAAC TGAACAAAGA AGACTGGAAG CTGGTCAGAC AGATCAAAGA ACAAGTTCAG CAGCTACCAG ATCTTGAATT ACCCCCTCAA GAATGTTTTA TCATTCTTGA AACTGACGGA TGTATGGAAG GATGGGGAGG AGTTTGCAAA TGGAAGAAGA AGGAGTATGA TCCTAAAAAT ACTGAAAGGA TTTGTGCCTA TGCCAGTGGG AAGTTTCATC CAATCAAATC AACCATAGAT GCAGAAATCC ATGCTGTGAT GAACTCCCTT GAAGCCTTCA AAATCCATTA CCTGGACAAA CCATCCTTAA CCATAAGAAC AGACTGCCAG GCCATCATAG CCTTCTTTGA CACTATCAGT AATCATAAAC CATCTAGACT TAGGTGGATA AATTTTACTG ATTATGTTAC AGGATTAGGC ATTCCAGTTA ATTTCCAGCA TGTTAAAGGT GAAGATAATA GATTAGCTGA TGCTTTATCA AGGTTAATCT CTGTTATCTT TGAAGCAGGA CAACAATGGC AGGAAGAATC AACAAGAATG CAGCATCTGA CACAGCTAAT AGGAGAGCAC TACAAATTCG AGGCATCGGG GAAGAAGCAC CATCAACTGA AAGAGACACT CACCGCCTTG ATAACTTCTA CCATGAACTC ATGGACAGAG AAATCACTCT CCTCCACACA GAAGGAAGCA TTGCTGTCAG ATACAAGGAT CACATCCACC AACAAATGGC CATTATTGAA AGACAAGCCT GTGCACAAAC AGAACAAGCA CTCAAACAAC TGGAAAGAAT ACAAAGACAA AAGGAGGACT ACATCTGGCA GTCAGCGACA AGAGACAACT GGGCCAGTGA CAGGTTACCA TCCACCATAG CCAGAAACAA CGCACTCAGC AGCAGGATAG AGGGAATCAA AGGACTGATA AATGACATAA AGAGGACCCC TCTGTGATAA TGGAGCGTGA TGGACCCTGG ACCAGAATAA AGAGGTTAAT TCCACTCAGA CCGAAATTGT GGAAATAATT ATGTATGCTT TAATAATTGA GTCAGGTAAG AAAGGAAATC TGTTGTCCTT ATCTACCTAA AGTCAGTATC ATGGGTGAGA AAGGGTTTTG TCTTTGTCCC CCACTAAATA AAAGTCGAGT CACGGGCAGT AAAGGCATTT GTCCTTACCC GTCTAGTGGA GTACTAAATT ATGAGGATGG AAATTATTAT GCTGACGATG GGGCCCAATG AGCACCCGGG CATCACTTTT CCTTCCTTAT AAATAGCTTA GTTATCTCAT AGCTAAGATC ACGGAAGAAA TACTTCAGAT CTTACTTTGA GCTTTGTAAG TGTTCTTGAG TCTAGTGTTT GTAATCTTTC TTGTTCTTTA ATAAATTCCA GTCCCTCGGA CTTTAAACCA TTTTCATTGA TCCTGTTTAC TCTGTTTATA CTGTTGCTAT CGTGAATTGT ATGTTGCCAG AACCTCACTG TAAGGTTATT GGATCCTCAT AGTTTTCACG CCGGCAACCG TATTCCGCCG CTTCCGCCCC CTCTT 
Length7435
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg933971 Serinc-domain containing serine and sphingolipid biosynthesis protein
1.41421 Ahg482210 galactosyltransferase 13
2 Ahg948670 calmodulin like 43
3 Virus3919
3.16228 Ahg913770 Protein of unknown function (DUF784)
3.31662 Ahg312882 Galactose oxidase/kelch repeat superfamily protein
3.60555 Ahg891944 PR5-like receptor kinase
4 Ahg936650
4.24264 Virus3785
4.47214 Ahg326981
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression