Detail



ID : Virus3785

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionSunflower_chlorotic_mottle_virus|plants|ssRNA
Sequence
AAATTAAAAC AAAACATCAC AACACAACTG AAAACATACA AGCATACAGA ATTTCTTGCA ATCTCTAAGC AATTCAGTAA ACTTAAATCC TTTTCAGTAA AATTAACAAT CAATCAAATG GCAGCAACAC ACACCATGGA TTACGCAACA TTCCGCAAGT TCAATAAGCA AACTGAAGGT CGATTCAACA AGCATCATCT AGCTCGTCAC AATGCGGCCG TCAAGCGTGG ATTCGTATAC AACTTCGATG AAGATTGTTA CGAATGTCCC ACTTGTGAAC AAGTGTTCTG GCGTGTCGAG GAGATTGACA ATGAGCACTG CTGTGAAGAC TATTTGGAGC AGGTCGACTT CAACTACCGC GAAGAGCAAC AAAACATTCA AGATTTCATT AGGAAAGCTC AAGCAGCAGT AGTTGAAGCT ACATCTGAAA CTAATGTTGA ACAGCAGACT GGTGAAACTA TGATGTTCGG ATCTTTTCCA TCAAACATTC CATTTGTTTC TCACACAGTG CCTGTGTCTG AGTCTTCCAA GGGCCTCGAT GAAGTGACAA ACTCAACACT GGAAGCTCGG GAAACAGTTG TCTTCACTGT GAAAACTCTC AGCACTGATA CGCCAATGGC AAAGTGCACT GATCCGTTCG ACAAGCTCGA TGAGATCCTT GCCAAGAGAT TGGAGAAACA AGCATTCGCT ACTATAACTA AGCGAAAAGA TGGCACACTC TTTTATAAAT ACAGGAGCAA CAAGCAGCTC GATAAGATAA AATCAAAAAT CCAAAAACAG AAGGAGGAGG AGGAGAAGTT TCAACAGTCA CCACCTACCA TAATCACACG CATATCAATA GCTGGTGGTC CTGCGCCATC TCAAGTCATG GAGATTGGTG GCAAGAGAGG CATTCACACA GTGCCTAGCA TGAAGACGAA ACGAGCTTTC AAGAAACAGA ACATGACAGA TGCTCAATTC ACTAACTTTA TCAAGAAGAT TAAGAGCATC ATGGCACAGA AGCATGCATC TGTGGAAATC ATCACTAAGA AATCCACAAA ATTGGACTAT GTCACAAGGA GTCACAAAAC TTGTGCACGC GTTGCTGTTC TCCATCTGAA GGGAATAAAG AGAAGAGTGG ATTTTTCCTG CGACTCATGG ACATCCAACA TAGTTAAGCA ACTCTCAAAG GTTGGTAAGT GGCAGGATCA AGTGCACACA ACTCAATTGC GTAAGGGTGA TAGTGGTGTT GTTCTAAATG CCAAGAAACT TAAAGGGCAC CAGTCACGGT CATGGAATGG TATGTTTATC GTGCGCGGAG TTTACGAAGG CAAATTATTT GATGCTAGAA CGAAAGTGAC TTTGACAACA ATGCTTCGAA TGGCACAATT TTCGCATGCC ACTGAGTTTT GGAAAGGAAT TGATGGCAAT TGGGCTAAAT ATCGTTATCC AACTGATCAT GATTGCACAC CAGACATATC AGTTGCAGAT TGCGGTCGAA TGGCAGCATT AGTAACTCAC AGCATAATTC CATGCTCCAA AATAACCTGT AAAGAGTGCG CTCGGAAGTA TGCAGAAATG CCCGTTGAAG AGCTCATGGC AATGTTGCAC AAGCACGCGC ATGAAGGCTT GGAAAGGCTT GGTGTTGATA GGAGTGTTTT CCCACATGTG GAGCAGCTTT TGAAGGTTGT TAGATGTTTC TCAGAACCAA CTGCAGTGAA CCCAGACTAT TTTGATGAGA TGTACAAATC AATTGGTGAC AAGCAGCATG GGCCCTTCAA ACATTTAAAC ATTTTAAACA ACTTTTTCTT GAAAGGGAAA ATGAATAATT CGCAGGAGTG GGTAGAAGCA CAAAAGAGTT TGCTCGAGCT GGCCAGATTT CAGAAAAACC GAACTGATAA CATAAAGAAA GGTGACATTG CATCTTTCCG GAACAAGTTG TCAGCAAAAG CAAATTGGAA CTTTTATTTA TCTTGTGACA ACCAACTGGA CAAAAATGCC AATTTTGTGT GGGGTCAACG TGAGTATCAT GCAAAGCGTT TCTTTTCTAA TTTCTTTGAG GAGATTGACC CATCAAAAGG ATATTTATCC TATGAAATCA GAGTCCATCC AAATGGAGCA CGGAAATTGT CAATTGGAAA CTTGATTGTT CCGCTAGATC TTGCAGAATT TAGGCAAAAG ATGAAAGGAG ATTTCATTAA ACAGCCTACT GTTGGGAAGC AATGTACAAG TCTGAAGGAA GGAAACTTTG TGTACCCATG TTGTTGCACT ACACTGGATG ATGGCACAGC AGTTGAATCA ACATTCTATC CACCAACGAA GAAGCATATG GTGATTGGGA ACAGTGGAGA TCAAAAGTAC GTTGATTTGC CAAAAGGAGA TACGGAAATG TTGTATATAG CAAAAGAAGG ATATTGTTAT ATTAACATTT ATTTGGCGAT GCTTATCAAC GTAAATGAAG AAGATGCAAA AGACTTCACC AAGAAAGTTC GTGATCTGTG TGTCCCTAAA CTTGGGAAGT GGCCAACTCT CATGGATTTA GCAACCACTT GCGCACAATT GCGAATTTTC TATCCTGATG TTCATGATGC TGAATTGCCA AGGATATTGG TGGATCACAA CACACAAACT TGTCACGTTG TTGATTCATT CGGGTCTATA ACGACTGGAT TTCACATTCT GAAGGCAGCT ACAGTTTCAC AACTAATTCT GTTCGCTAAC GACGAATTGG AATCAGACAT CAAACATTAC AGAGTTGGTG GAACTCCTGA AAATGCGGAC TCACTTCGTG ATGGCGAGTC TCCATTTGGC CCTAGCAAAG TGATGATTAG CGAATTCGAG GCTACGAAAG TTTTACTCAA AGGCATCTTC CGACCAAAAA TCATGAAGCA GCTCTTAATT GATGAACCAT ACATCATGTT AATGGCGATG CTATCACCCG GGATTTTATT GGCAATGTAC AACAATGGTT CTTTTGAAAT CGCTGTTAAG CTCTGGATAA ATGAGAAACA ATCACTAGCC ATGATAGCAA CCATGTTGTC GTCACTTGCA ACTAAGGTTT CAGTTTCAGA AACTTTATTG GCACAACGTA GAATTATGGA TACAGCAGCG AGTGACTTAT TGGATGTCAC ATGTGATGGG TTTAAAATGC ATCTAACTTA CATGACTGCA ATCCAATTAC TTCAGCGCAC CAAAGAGAAG GCACATAGTG ATGAAGCTTT GTATACCAAT GGGTTCATGA ATTATGAGAG AGAAGTACTT CACCTCATGG AAAAAAGTTA TCTAGATCTC TTACACGAGG CATGGTGCGA CTTAACTTGG TGGGAAAAAT TATCTGCAAT TTGGCATTCA CAAAAAGCCA AGCGACTTAT TGCTCAACCT TTGCGACCCA TCGGAAAAGC AGATTTGAGG GGCTTGTACG ACATATCACC AAGTGCATGT TTGGAAAGGA GTTTAAAAGC TTTCAAGAAC GGAAAAGAGA ATGTCAGTAA GAGTATTAGG TTGTATGTGC ATAATAAGAC AGTTAAAGTC ACTTCTTTCT TTGTTAATAA AATTTTCCGT AGTCTCCCTT CTTTAGTTGT TTTTACTAAT GTGATTACGA TAACTAGTTT GTTGGGTAGT ATAATTTTAG TTCTACAAGG TTTAATAATA GAGCATAAAA TGTATAAAAG AAAAATTCAA CAAATCGAGA TAGAGAGCAA CGAAAAAGTT TGTGTTGAGC TTTATGCTTC CCTCCAAGCC AAGTTGCAAA GAGAATTCAC TTGGGAAGAG TACATTGAGT ATCTGGAAAC GGTGAACCCG AGCATCGTCG ACTTCGCTAA GAAACAAATG GAACAATACT CTGTCAAACA TCAGAAGAGT ACACCGGAAG TCAAAAACCT GGAGCAGGTA ATTGCATTCA TAACGTTAAT AACAATGCTT TTTGACTCCG AAAGAAGTGA CTGTGTGTTC AAAACGTTAA ACAAGCTAAA GGGTATTGTC TCAACGTTAG ATTGTGAAGT TCGACACCAA TCCTTAGATG ACTACATGGA AAATTTTGAT GTTCGCAATC AAACAGTTGA CTTTGAGCTA GACGACGAAA TAACACGAGG TAGCCACACA CAAGATATAA AATTCACAGA CTGGTGGGAT CGTCAAATTC AAATGGGGTA CACAATACCA CATTACAGAA CGGAAGGGCA TTTTGTGGAA TTCACCAGAG CGAGAGCAGT TCAAGTAGCA AGTGACATCG CTCAGAGTGA GCATTTAGAT TTCTTAATTC GTGGTGCAGT TGGATCTGGC AAGTCAACTG GCTTACCAGT GCATTTGAGC TCATCTGGCT CCGTTCTGTT AATTGAACCA ACAAGGCCCT TAGCTGAAAA CGTTTTCAAA CAATTATCCA GTGGTCCTTT CTTTCAGAAA CCAACGATGC GAATGCGCGG AAACAGTGTC TTTGGCTCGT CACCAATCTC AATCATGACG AGTGGATTTG CTTTGCATTA TTTTGCTAAT AATCGAAGCC AACTCACAAA CTTCAATTAT ATAATTTTTG ACGAATGTCA TGTGATGGAT GCTTCTGCAA TGGCCTTTAG AAGTTTAGTC AGCGTCTTTC ACAAGAGTTG CAAAGTGTTG AAAGTTTCCG CTACACCACC AGGAAGAGAA GTTGAGTTCA CTACACAGTT CCCTGTTAAA CTTATCGTTG AGGACTCCCT TTCTTTTAAG TCATTTGTAG ATGCTCAAGG GACTAAAAGT AATGCGGACG TCATTCAACA TGGTCACAAC GTTCTGGTCT ATGTTTCAAG CTACAATGAA GTTGACAGCT TATCGAAGTT GCTAACAGAA AAAGGCATGA TGGTGACAAA AGTTGATGGT AGAACTATGA AGCACGGGAG CCTTGAAATC ATCACGAAAG GAACGGCAAG TAAACCACAT TTCGTTGTAG CCACAAACAT AATCGAGAAT GGGGTGACAC TTGACATAGA TGTAGTGGTT GACTTTGGGT TGAAAGTGTC GCCGTTCTTA GATGTGGATT CACGTAGCGT TTCATACAAT AAAGTGAATG TCAGCTACGG GGAACGGATT CAAAGGCTTG GGCGAGTTGG AAGGTTTAAA CCTGGTGTAG CTTTGCGCAT TGGTCACACT GAAAAAGGTC TTATTGAGAT TCCGAGCATG ATAGCAACAG AGGCTGCGTT AGCTTGTTTC GCATACAACT TACCAGTAAT GGCTAGTAAT GTCACGACAA GTATAATCGC AAACTGCACG GTTCGGCGAG TTAGAACGAT GAATCAGTTT GAGCTCAGTC CATTCTTCAC AACAAATTTT GTTTTCTACG ACGGCACGAT GCACCCAGCA ATCCATGAAG CTCTGAAGAA ATACAAGCTT CGAGAATCAA TCACACCGTT GTGTGAGCAA TCAATCCCAT ATAGGGCTTC GAGCGCTTGG ATGTCAGCGT ACGAGTATGA AAGAATTGGT GTATCTTTTG ATCTTCCCCA GGCAGTGAAG ATTGCGTTTC ACATCAAAGA TATACCAGAG GGACTACACG AAAATCTTTG GAATATTGTG CTCAAGTTTA AAGATGTGTC AATCTTTCCA AGCATCAGAT CATCATCTAT TAGCAAGATT GCGTATACGC TGAACACTGA TCTTTTTGCA ATTCCTCGAA CTCTAATTTT AGTGGACAGA TTGATAGAAG AAGAGCGCGT GAAGCAAAAT CAGTTCAGAA GCTACATCGA TGAGGGTTGC AACAGCATGT TTTCAATTGT TAATCTCACC AACACACTGC GTTCTAAATA TGCAAAAGAT TATACAGCTG AGAACATTAA GAAGCTTGAA ATGGTTAAGA GTCAACTGAA AGAATTTTCT AATCTCAATG GATCAGTCGA CGAAGAGAAC TTAATCTCAA AGTATGAATC ATTACAATTT GTTGTCCATC AGTCCAAAGA TTCCTTAGCA AAAAGTTTGA ACTTGAAGGG AATCTGGTGT AAATCTCTTA TGGTCAAGGA TGCACTAATA GCAGGAGCGG TGTCGATTGG AGGAGTGTGC ATGATTTATC ATTGGTTTAC ACAATCATTC CAGAGTGTAT CACATCAAGG GAAGAATAAA TCGAAGAGAA TTCAAGCTCT CAAGTTCAGA CGGGCGCGAG ATAAGCGAGC AGGTTTTGAG ATTGACAACA ATGATGATAC AATCGAGGAG TTCTTTGGAT CTGCGTACAG AAAGAAAGGA AAGAATCCAG GAAACACAGT TGGAATGGGC AAATCGAACA GGCGTTTCAT CAACATGTAT GGGTTCGAAC CAGGTGAATT TTCTTACATT CAGTTTGTGG ACCCCTTAAC TGGAGCACAA ATTGAAGAGA ATGTTTATGC CGACATCGTT GATATTCAGG AGAGATTTGG CGAAATCAGA AGGAAAATGA TTGAAGAAGA TGAATTGGAC TCTCAATCAA CGTTAGCGCA CACAACAGTT CACGCATACT TGAGAAAGGA TTGGTCAGAT AAAGCACTAA AAGTTGACCT AATGCCACAT AACCCTCTCA AAATTTGCGA TAAAACGAAT GGTATCGCGA AATTTCCAGA ACGCGAAGGA GAGTTGAGGC AAAATGGAGT AGCAGTTGAA GTGAATGTGA GCGATATCCC AACGATCCCT GTCGAACACG AATCAAAATC ACTGATGAAA GGGTTGCGTG ATTATAATCC TATTGCTCAA ACAATTTGCA AACTCAAAGT GACATCCGAA TTTGGAACAT CTGAGATGTA TGGTATTGGT TTCGGTGCAT ATATCATTTC CAATCATCAT TTATTCAAGA GTTTCAATGG GACGTTGGAA GTTCGATCTC ATCATGGTAC ATTCAAGGTG AATAATATGA TGGCATTGCA AGTTAAACCA ATCGCAGGGA GAGATATAAT CATCATAAAG ATGCCAAAGG ATTTCCCAGT CTTTCCTCAG AAGCTTCATT TTCGGTCTCC CAAAAACAAT GAGAGAATGT GTATTGTAGG TACAAATTTC CAAGAAAAAT CAGCTTCATC TACAATAACA GAGACAAGTG CTACATACAT GGTTCCTAGG AGTTCATTTT GGAAGCATTG GATTGCAACG GATGATGGAC ATTGTGGATT ACCTGTCGTT AGCACGATCG ACGGCAAGAT AATCGGAATT CATAGCTTGG CAAACAATGC TAATAGTGAA AACTATTACG CAGCGTTTGA TGATGATTTC GAAGAGAAAT TCCTCAGAAC CTCTGAGCAC ACAGATTGGG TTAAGAACTG GAGATACAAC CCAGACACTG TTGTATGGGG ACCTTTAAAG CTAACTGAAA GCACACCAAA AGGATTGTTT AAGCCAACCA AGATTCTTGA GGATTTGTTC GAATACAATT CTGTTCGCGA GCAGTCAAAG AATTCGAACT GGATGTATCA AGCTCTTAGA GATAACTTGC AGGCAGTTGC ACATATGAAA AGTCAGTTAG TTACAAAGCA CGTTGTCAAG GGCGAGTGCA GATACTTTCA AGAGTTTTTA ACAGTTGACA AGGAAGCTTC AAACTATTTT AGGCCGCTAA TGGATGCATA TGGCAAAAGT TTGTTGAATC AGGAAGCATA TGTTAAGGAC ATTATGAAGT ATGCTGAGCC TATTGAGATT GGCAGAGTAG ATTGCGATGC CCTTGAGGAA GCCACACATC GAGTTATCCT TTATTTGCAG ATGAAAGGTT TTCGGACATG TTCTTATGTG ACAGATGAGC AAGCAATATT CAAGGCACTA AACATGAAAG CAGCAGTAGG TGCGATGTAT GGAGGAAAGA AAAAGGAATA CTTCCAGGAC TTTACGGATA AAGACAAGGA GGACATCGTC ATGCAGAGTT GTTTGCGGTT GTACAAAGGG GAATTGGGAA TTTGGAATGG TTCACTGAAA GCGGAGCTAC GTTGTAAAGA GAAAATTATG GCAAATAAAA CACGCACCTT CACAGCAGCT CCTCTTGACA CGCTTCTTGG TGGAAAGGTT TGTGTTGACG ATTTCAACAA CCAATTTTAT TCGAAGAACA TTGAATGTTG TTGGACAGTC GGAATGACCA AGTTTTATGG AGGATGGAAT AAATTGCTCA GAAGTCTGCC TGACAACTGG ATATACTGTG ACGCGGATGG ATCCCGATTT GACAGCTCAT TAACTCCATA CCTCATAAAT GCAGTCTTGG CAATTCGAGC AACTTACATG GAGGATTGGG ATATTGGATA TCAAATGTTG CAGAACTTGT ACACAGAAAT TGTGTATACC CCAATCTCAA CACCAGATGG AACAGTTGTC AAGAAATTCA GAGGCAACAA CAGCGGACAA CCATCCACAG TTGTTGACAA TTCCTTGATG GTTGTGCTTG CAATGCATTA TGCATTTGTG AAAGAATGCA TCGATTTTGA GGAAATAGAT GAATGTTGCA AGTTCTTTGT CAACGGAGAT GATTTGTTGA TAGCTGTCAA TCCAGAGAAG GAAGACATGC TTGATAGATT TTCAGACCAC TTCTCATCCT TAGGCTTAAA CTATGATTTC TCATCCAGGA CAAAACACAA AGAAGAATTA TGGTTTATGT CTCATAGAGG TCTTGAAATT GAAGGCATGT ACATTCCAAA ATTGGAAGAG GAACGTGTGG TGTCTATCTT GCAATGGGAC AGAGCAGAAC AACCTGAACA CCGACTAGAA GCTATATGTG CAGCAATGAT TGAGGCGTGG GGCTATCCTG ATTTGATTCA TCAGATTCGC AGATTCTATT CATGGTTACT TGAGAAGCAG CCGTTTGCAA CACTTGCTGA AGAAGGGAAG GCCCCTTATA TTGCGAGCAT GGCTTTAAGA AAATTGTACT TGGATAGAAC AGTTGACAAT AGTGAACTCC ACGAGTTTAG AAAATTATTT GTCGAATTGG ATGACGAATT TGAGTGTGGA ACGTATGAAG TGCACCATCA AGGTGACAAC ATAGATGCAG GAAAAGACAA GAAAGACGAG AAGAAGGATG ATAAAAACAA GCAAGTTGCA TCCACAGCTA GTAAAGATGC TGCGAAGTCA AAAGATGTCA ACGCTGGCAC TTCAGGAACA CACACAATAC CCCGTATCAA AAGCGTAACA CCAAAGATGA GAATGCCAAA ATCAAAGGGT GCTATAGTTT TGAATCTAGA TCATTTGCTC GAGTACACTC CACAACAGGT TGACATATCA AATACTCGCG CAACCCAATC TCAATTTGAT ACTTGGTATG CAGCAGTTCA ACAAGCATAC GACATCAGTG AGAGCGAGAT GCCGACAGTG ATGAATGGAC TTATGGTTTG GTGCATTGAA AATGGAACCT CGCCAAATAT TAACGGCACT TGGGTGATGA TGGAAGGAAG TGAGCAAGTC GAGTTCCCAC TCAAACCCGT TATTGAAAAT GCAAAACCGA CGTTCAGACA AATCATGGCA CACTTCTCTG ATGTCGCAGA GGCGTATATC GAAATGCGCA ACAAAAAGGA ACCGTATATG CCACGATACG GTTTAGTTCG AAATTTGCGA GACATGAGTT TAGCTCGTTA TGCGTTCGAC TTTTATGAAC TCACGTCTCA AACTTCAGTC CGAGCTAGAG AAGCGCACAT ACAAATGAAA GCAGCTGCTT TGAAATCAGC GCAAACACGT ATGTTTGGAT TGGATGGTGG CATTGGTACA AAAGAGGAAA ACACAGAAAG ACACACCACC GAGGATGTCA GCCCCAACAT GCATACTTTG CTTGGGGTTC GTAACATGTG ATCATGTGTC TACTGGGATG AAATATAACT ATATATCGTA TGCAATATAT ATTTTGGCTT TTCCTGTACT ACTTTTATTA CGTCTTTACA GTATTTCATA TTTCAAGCAA TAGGAAGTGA CTTTGTGATT TCGTCATGAA GGTGGTTTCT ATTTCTTCTT GTATCTGTTT TAGATTATAT AAGAGTTCCG GGTTGTTTTC GAGAGTGATG TTGTGATTCC GTCATAGCAG TGATTGCAGA TCTCAATCAG GAGAC 
Length9965
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus3919
1.41421 Virus3620
3.4641 Virus3764
4 Ahg952009 histone deacetylase 5
4.24264 Virus0061
5.2915 Ahg943059 Ubiquitin-like superfamily protein
7.07107 Ahg924291 cyclic nucleotide-gated channel 12
9.16515 Ahg482210 galactosyltransferase 13
9.48683 Ahg890502
9.94987 Virus3910
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression