Detail



ID : Virus3109

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionCocksfoot_streak_virus|plants|ssRNA
Sequence
AAATAAAAAC AGCTTAGACA ACCAAAGAAG AGAACGATTC AGCAGCTTAC AAACCTACAG CGAACGAACA CCCTCTTCAA CTCTCAAATC TCTCTCTCAA CTCTCCTTCA ACACTCAAAC TCTCTCAACT CCGATGGCGA CGTCAACAAT GATGGTTTTT GGTGATTTTG TCACTGTAGT GAGGCAGCGG GGAGCTGTGG TTAAGTCGAA GTGCCTAGGT ATTCGCTGCC CTGGTAGCGA TTATATGGCC ACTCTGCCTA ACCCAACAGC TGGACAGATG GTGAGGTCGC TCAACATTGC CTCCAAAGCA ATGTTGGACG ATTACAGTAA GACAACAGCA GCAGCGTTTG CAACTCTGCG CAACGTCGAG GCGAAAGCCA AGGCAAGGCA TGAGGAATCA CGCATCTGCA GCGTGAGGAA AGGAGTGTTT GGCTATAAGC CATACACAAA GAACTTCCTT CGCAAACGAT CTCTTCAGCA GAAACAGAGA GAAGATGAAG AGAAGTGGTT CCAATCTCAG CCCGACAGTA TTGTGGGGCG AATCATCTCT TATGAGCAGC CACAGCTCAT TGAAGAGGAC ACCCCAAGGG TTGTGTGGCC ACGAGCGCTG AAGAAACCAC GCATCGCCTC CACACCCAAG AAGTTACTAT GGAATGAATG TGGCGATGAG CTGATGAAAG CAGTTCAGCC AACATCATAT CGCACGCTTG AAGTGATTGG CAATAAACGA CGACAAACAC ACCGAATATC TCTCAAACGC GTCAACTGGA AGTCCGTGTT TAAGGTTGAA ACACGTCATG AAACTGGGCT CAAAGTTGGT TTAGACCCTC CAACGAGTGC GTTTCAAAAT CACATCCTTA ATCGACTACT TCGAATAACT CCACGCTTGT CGATACGTGA GATTGAGAAT TTAACGAAAG GCAGTAGTGG GTATTTAATC GATGATCCTG ATGATTACGC CGCCCGTGTT CCTTTCGTTG TTCGAGGGAG GTATAATAGT ATATTGTTGC CGTCAACGCA GATACTGCCT CGTATCGTCA TGAATGGTAT GGTCGAATAC TCACAGGGTG AAGAATTCTG GGCAGGGTTC AACGAAGCGT TTGTTGCCAA GCGGAAGAAT CCTACACATG CAGGCGAATG TAGAGCTCGA GATACTGTGA GACAGTGTGG TGAAGCAGCC GGTATACTTT GGCAAGGAAT GTTTCCATGC TTTAAGATTA CATGTGGAGC TTGCCAGGAC CAAGTTGGAG TGACAGCTGA CGACATCGTT AAAGGTGAGC TCATTGACAA TTTGTTTGAA GCAGCAACAA ATCTTGACCG TCTACGAATT CAGCCAAACA TTTCAGGCAC CCTCAATGCT GTCGCGACCA GACTCCAGCC AACTCAGGAT CATGTGCAAG TTTGTCAGCA AATTATTCAA GCAATAGGGG ATGACAATGA TGGTCCAGCG AGACATTTGC GACTAGCAAC TGAGAAATTC ATCACTCTGC AAGTATCGGA TGCCGAGAAA TGCATTGACA TATCAAAGAA CCTCCTGTTG GTTGCAAATT TCATTAAAAA CAGAAGGGAC GGTCTAGTGC GAGGCGATGT CAAAGAGTTC AAGAACAAGA TATCGAACAA GGCACACGTA AACCCTGTGC TAATGTGCGA TAACCAATTG GATGCCAATG GTAACTTCGT TTGGGGGGAG AGGAGTCATC ATGCGAAACG CTTCTTCGAC AATTTCTACA TGCAGGTGAA TGTGGCTGAC GACTACGGTG CACATGTCTT GCGGAGGCAT CCAAAAGGCA GTCGTAGATT AGCGATCGAT CGCTTAACTT TGCAATTGGA TTTAAAAGCT CTCCAAGAAC ACGTGATAGG ATACCCAATT GAGCGTGCAC CTATAACATC AGCTTGCATA AGCAAGAAAT ATGGCGCTTT TGTATTCACA TGCAGTTGCA TCACACTTGA TGATAAAACG CCACTCTACT CAGACATCAT CATGCCCACG AAACAACACC TAGTGATTGG GAACTCAGGA GACTCAAAGC TCATTGATTT CCCCGAGACG TACCGAGACA AGCTATGGAT CGCAAGAGAT GGATATTGTT ACGTTAACAT TTTCCTCGCC ATGTTAGTGA ACATTAATGA AGTTGATGCC AAAAATTTCG CCAAGACAAT TCGTGATCGT GTGATACCGC AATTAAAGGA ATGGCCAACT ATGAGAGATC TGGCAGCTAG TCTACACATG TTAACAGTTC TATTTCCAGA TACTAGACAA GCTGAATTGC CACGCATACT TGTTGATCAC AGAAACAAGA TGATGCACGT TGTTGATTCT TATGGTTCAA GTGATATCGG ATTCCACATA CTTAAAGCTG GAACGGTCAG TCAATTGCTA CCGTTCATGT TCGATTCCAC AGAAGGCGAA ATGAAAAATT ACCAAGTCGG TGGAACCCTT GAGAACCTAT CAGTGATGAA GGCAGTGCAA GTTTTAATCA AGAGCCCTTG GCGACCAAAA CTCATGAACC TGGTTTTAAC GCAAGAACCA TTTCTTATCG CTCTAGCTGT CGTCTCGCCA AGTGTGCTTG TAGCTATGCA CACAAGTGGA ACGTTTGAGC TTGCTATTGA ACGATGGCTC GAGGATAACC AAGATATAGC CGTGTTGTTC TCAACACTAA ATTCTTTAGC GGAGAAGGTT TCACGCTCGA GATTTTTGGT GGACCAGATG CACATGATTG AGGAATCTTG CGAAGAACTA CGAAGATTAG CTTGGGATAT CAAATTCACT TCGCATTCAA AACCTTTGTT GATGAGCCAA CTAGAAGTGA TGTGCAATCG GAGAATAGCT GATGGAGAGC TTACAGGCCT TGGATTTAAA GTGTACAACC AGGACACGTA CGACAGAATT GAGAAAAAAT ACATCAACGA TATTCGAGAT TCATGGTTCG CCTTAAGCTT GTGTGCAAAA TTTCGATATC GTTGGTATGC TTGGAGGCTG CACAGATATT TTACAAACAA GTCTCTCCTG TCAGATATGG GAGATTTCAG CGTCAGCGCA TACGCATCTG TGCAAGACTC GGGTGTCCGG TTTCGCGAAG GAATTACCCG GCGTCTAGCC AATACATACG ACGCGTCGAC AAGAGCGTGC ATCGACGGCA CTAGATTCAT CATGAGGCGT GCGGTTGGAG CAGTTGCATA TTGCATTCCT GATATACTAC ATATGATCAA TACTTTGATT GTCGTAAGCC TAATCCTTGC AATTGCACAC CAATCTGTGA TCTTTATAGC AGACTATAAG AGACTCAAGC AAGAGCAAGC TTTTGTGCAG TTCCAGAAAG AAACTGACGA AGTAGCAGCA GTGCACGCTC TTCTCACGAA TAAACTTGGA ACACCGCCAT CCGAAGAAGA GTTCATCGAT CATATCACAG ATACGTACCC AGCGCTTAAA TCAACTGCGA TGTTAATGAC GTATCCGATG GTCAAGCATC AAGCTAAAAC ACATGCAGAA GCAAAACTCG AGCAGATAAT GGCACGTATG GCTCTGGCAG CAATGATGTT CGACGCACAA AGAAGCGATG CCGTTTTCAA AGTTTTGAGT AAAATCAAGA CAGTTCTAAC ATCAGCAGGC CAAAGTGTAC ATCACCAGAT GAGTACAATC GATGATAGTT CTGACGTCAC AGCTGAGAAA CTCCTCACGA TAGACTTTGA AACAGAACAC GAAGCACCAC CCACCAAGGC CACATTTGAT GTGACCTTCT CTGACTGGTT CGATCGGCAA CTCAGAGAGG GACGCACCAT ACCCCACTAT CGTCAAGGTG GCACTTTCTT AGAATTTACA CGCGCAACTT CTGTGCAGGC GGCCAACACG ATATCGCATG ATCCTGACAT ACGTGAGTTT ATGATTCGTG GACCGGTCGG TTCCGGTAAA TCGTCATCAT TGCCTTACGA ACTTTCGAAG AAAGGTCATG TTCTAATAAT CGAACCGACT AGACCCCTCG TGGAGAATGT ATGTGCTCAG CTGAGACAAG ATCCTTTCTT TCAGGATCCA ACTAAACGCA TGCGTGACAA CTGCACATTT GGCTCTTCCA ATATCACCGT CATGACACCT GGCTATGCCC TCAACTTGCT CGGACATAAT GTTGACAAAC TACAGAACTA CAAATTCATA ATATTCGACG AATGTCACGT GATCGACGCT TCAACAATTG CCTTCTACTG CCTCTTACAT GAATACACCT ATCCTGGGAA GATTGTCAAA GTCTCTGCAA CACCGCCGGG TCGCGAAAGC GAGTTTCATA CGCAACATAA GGTTGACATA ATCAAGCAAG AATCACTCAC TTTCGATGAG TTCGCCACAG CCCAAGGCAG AGGAACAAAA GTCGACATGA CAAAGCACGG CGATAATATA CTTGTGTACG TTGCAAGCTA TAATGATGTT GACGCCCTCG GTAAACTGCT GATAGAACGC GGTTACACAG TCAGCAAAAT CGATGGTCGA ACTATGAAAT CTGGAAACGT GAAAGTTGAG ACACGGGGAA CGTCAATTCG AAAACATTTC ATAGTGGCAA CAAACATCAT AGAGAATGGT GTTACGCTTA ACGTTGATGC AGTTGTCGAT TTCGGTCTCA AAGTGACAGC AGAACTTGAT TCAGACATGC GCACCATAAT TTACAAGAAG ACAAGCATAT CATTTGGTGA GCGCATACAA CGCATGGGTC GTGTGGGCCG TGTGAAGCCA GGAAGTGGAC TTCGTATTGG TTACACCGAG AAAGGAGTTG CAGACATACC CACCATGGTG GCAACTGAAG CGGCTTTCCT TTGTTTCGCC TTTGGTCTCC CTGTCGTCAC TCAGAACGCT TCAGTTGATC TGCTAGGTAA GTGCACAGTC CGCCAAGCTA GGTCAATGCA ACTATTTGAA CTGCCACCCT TCTTCATGGT TGATCTTGTT CGGTATGACG GAGTTGTCCA TCCAGAGATT CATACAATTC TTAAACAATT CAAGCTGAAG GAATCTGAGT TAGTCTTGAA CACTAACGCA ATGCCATTTG CTGTTGTTAA GAAATGGTAC ACAGCTGAAG AATACCAGAG ACTGGGTAAT CGCAACACGC TTGAGCCACA AGTTAAGATT CCTTTCTTCG TGCGTAATAT ACCAGAGAAG GTGTATGAAG ACATTTGGAA GGTTGTGAGC AACGAGAAAG ATTCATGCTG CTTCCCAAAA ATTTCAAGCG CTTCAGCCTG TAAAGTCGCA TACACTCTCA AAAGGGACCC TCTCACAATC GCACGCACTC TTGGGATGAT TGAACATCTC ATTACTCAAG AAAGGATTAA ACATGAGCAC TACAACACTT TGAGCACCAA TGCCAGTTCC TCGCATGGGT TTACGTTATC AGGCATCACG GATCAACTCA GGCAGAAGTA CATGCGGGAT CATAGCACAG ACAACATACG AATTCTCGAA GAGGCCAAGA ATAAGTTATG TGAGTTTGAA AATCTCGACA TAGACTTATC AAATCCAGAA ATGCTTAGGA ACTTTGGTGT GCTCAACATT GTGCAACATC AAACTTCTTC TAAGCTTTCA ACAGCACTTG GACTTAAGGG AAGATGGGAT GGCTCACTCA TAACACGTGA CATCATAGTT CTTGGGTGCG TTTTAATTGG AGGTCTGCTA ATGGTTTGTG AATTCTTTAA ATGGAAGAAG AATGAACCAG TCCATCACCA AGGCAGATCT AAACAACAGA GCCTCAAATT CAGAAGAGCC CGGGAGCAGA AACATGGCTA TGAAGTGTAT GGTAATGATG GAGCAGTCGA GCGCGAATTC GGACCGGCAT ACACAAAGAA GGAGAAGAAG AAAGGTAAGA CGCATAGGCT TGGAAAGAAG ACCAGACCTT TCGTGAACAT GTACAATTTC GACCCAACAG AGTATACAAT TGTGCGATAT GTGGACAATC TAACAGGGGA AACGTTAGAT GAGAGCATTC AAACAGATAT AACGATTGTC ATGGAACACT TCGCAGACAT TCGCGAACAA ATGGTTGATA ACAGACATCT TGATCCAGCC GATGATAGAG AGAATCTCAA CGCCACGGCA TATTTCATGC ATCCGCACAA AGAATCAGCC CTGAAGGTGG ATTTGACGCC GCACAACCCA CTACTTGTTG GTCGACGCAG GGTTTCGATA GCTGGGTATC CAGAAAGGCG AGGGGAGTTG AGGCAGACTG AAGATCACAC ATTTATCCCC GTCACGGAAG TTCCCGCCCC CAACTCATAC GTAGACCACG AGACGAAATC CATCGTCACT GGACTACGCT GCTATGATCC AATTGCAAAG AATATATGCA AGATAGTGTT CACTTCGGAT GGAACGATAT CTGATGGCTA CGGAATTGGG TATGGATCGA TTCTTATTGT TAATCAACAC TTGTTCAAGA GGAATAATGG GAGTATTAAA TTGCACAGTT GCAGGGGAAC GTACACGATT CCAAACTCCA CAGTGTTAAA GATTTCTCCA GTTAAGGATC GTGATATAGC TCTCGTCCGA TTGCCTCAAG ATTTCGTGCC ATTTCCACAG AAGCTGCAGT TTAGTAAACC AGACACGAGC ATGCGAATCT GTCTGGTCGG TGCGCAATTC CAAACAAATC ATGTCACAAC TGAAGTTTCG GACGCTAGTC AAACCTTCCC TCAACCAAAT AGTGGCTTTT GGAAGCACTG GATTTCCACT CAAGAGGGGC ATTGCGGTCT CCCTTTAGTG GATGTGAATT CACGCGTCAT CGTTGGTATC CACAGTTTGG GCCATGACGT AGTTGCGGTT AATTACATGA CCTCCATTCC AGAAAACTTT AAAGAAGATT ATCTTGAAAA GCTTGACGAA CTTGAATGGA CTAAGAAATG GAGGTACAAT ACAGAGGCAA TCAGTTGGGG TGGGCTTAAG CTTAGCTCGG AACAGCCAAG CGGTTTCTTT AAGCCAACAA AAGCAGTGGA ACCTCTACCA CAATTTGTCT CAATGCAATC TCGCGAGAAG AGGAAATGGG TTGCTGATGC TTTATGTGAT AACTTACAAA TTGTGGCTTC ATGCCCAAGT CAACTGGTCA CAAAGCATGT CGTGAAGGAT CGATGTCAAA ACTTCCTGCT GTACCTTTCA CTGCACCCTG AAGCTAATAC ATATTTCCAG CCTTTGCTTG GAAAATATGG CAAAAGCAGG TTAAACAAGG AAGCATTTGT CAAAGATTTT ACAAAATATG CCAGCCCAAT TGTTGTGGGA GTTGTTGACT GTGCAATATT CGAGGCAGCT GTTGAGGATG TGAAGTTCTT TCTTCACAAT GAAGGTTTTC AGGATCTCGA ATATGTTAAT GATGAGATGG CAATTTTCCA ATCGCTTAAC ATGAAAGCAG CAGTTGGGGC TTTGTATAGT GGCAAGAAGC GAGAATACTT CGAAGATTAC ACTCCAGACG ATAAGGCAGA AATCATCAAA CAAAGTTGTG AACGCCTCTA CAATGGGCAA TTGGGTTTAT GGAACGCCTC TCTGAAAGCA GAAATCCGTC CGATGGAGAA GGTTTCCTTA AACAAAACGC GTACTTTCAC TGCAGCACCA CTCGAAACCC TCTTGGCCGG GAAAGTTTGT GTGGATGATT TCAATAACTG GTTCTACACA AAACACACAG AATGCCCTTG GACTGTTGGA ATCTCAAAAT TCTATGGTGG TTGGAATGAG ATGTTGACGC GGTTGCCTGA TAACTGGATC TACTGCGATG CCGACGGTAC ACGATTCGAT AGCTCCCTAT CTCCATACTT GATCAATGCA GTGCTGGAAA TACGACTATC ATGCATGGAG AATTGGGACA TTGGCGAGAA AATGCTTGAA AATTTGTACA CGGAAATTGT CTATACGCCT ATCCTAACGC CAGACGGATC TGTCGTCAAG AAATTCAAAG GCAATAACAG CGGTCAACCC TCCACAGTGG TAGACAATTC CTTGATGGTT CTAATAGCTA TGACATACAC CTTACGCAAA CTTGGTGTCA CTAAGGAAAA GCAAGATAGT GTCATCAAGT TTTTCATAAA TGGGGATGAT CTGATAATAG CTGTCGAACC GGAAAGTGAA TCAATCTTGG ATGACTTCTC GAAACATTTC ATGGATCTTG GGCTCGATTT TGATTTTTCA AATAGGGTTA CTAAGAAACA AGAATTGTGG TTTATGTCGC ATCAAGGAAT CGAAAGGAAT GGTATTTTGA TACCCAAACT TGAAGCGGAG AGAGTCGTGG CCATTCTTGA ATGGGACCGT TCAGTTGAGC CAGTTCACAG ACTAGAAGCT ATCTGCGCAG CTATGATTGA AGCATGGGGT AATGATGAGT TGTTGTTGAA CATACGCTTA TTCTACCAGT GGCTATTAGG AATGGAGCCT TTCAAGCATT TGGCCTCCAT TGGAAAAGCC CCATACATAG CCGAAACAGC CCTGGAGCAT TTGTATACAG GGAAGAAGGT TGCAACGGAA GAACTAGAGA AATATTTTCA CGCTCATGCT GATTATATGG ACGAGCTCAT TCAGCTTGAC AGTCCGTATG TCAGTCACCA GGCGGGACAA ACAATGAATG CAGGAGCGAC GCCGCCGGCT CCACCGGCAC CTCCGACGCC GCGCCCTCAA AGTCAGCAAC CACCCAACCC AGCTGCGCAA CCCGTTGATA ATGAACCACC TGCGCCGCAA GGGCAGCGCG ATAGGGATCT CACTACCGGT TCCTCAGGAA CTTTCACCAT GCCACCACCA AAGATTTTCC ATTCGAAGAT GCGGTTGCCT ATGGTGAAAG GGAAGATAGT CGTGAATGCT GATCACCTCA AGCAGTATAA GCCAAATCGA GTGGATCTGT CCAACGCCCG ACGTTCGCAA GCTCAGTTTG AGGCATGGTT CGCTAAAGTG CAAGAGGCAT ACGATGTCAC TGATGATCAG ATGAGTTTGC TCATGGATGG ATTATTGGTT TGGTGTATTG AGAATGGCAC CTCACCAAAC CTCACTGGAA ACTGGTACTT CATGAATAAC GATGTTCAAG ATGAATATCC ATTAAAACCA GTGATTGAAA ATGCTCGGCC GACTTTCAGA CAAGTCATGA TGCACTTTAG TAATTTGGCC GAAGCATATA TTGAGATGCG TAACGCTACC GAAACTTACA TTCCACGGTA TGCACTGAAA CGTAATCTCC GAGACACAGA GTGCGCTCGT TACGCCTTTG ATTTCTACGA AAAGACTTCT CTCTCGCCTG AAAAGGCCAT TGAAGTGCAA CTACAAATGA AGGCAGCAGC AATTCGTGGA AAGTCCACAC GCATGTTTGG GCTCGATGGG AACATCAACT CTGGAGAGGA GAATACTGAG CGCCACACTA CAGATGACGT AACTCGTGAT ATGCACAGCC TCATGGGCGT GCGTAACATG TGAGCGTCAT TTCCCTCCAG TGCCGAAAAC TCCGGCTTAG GCCGGTTCTT TACACCTCAC CTGTTTGGGT GAGTTTGTTG GTTCCGTCTT CCATTCGCCT AGTGGATTCG TCTCAGCGGG GTTTTAACCC TCTGGCGTGT TCAATAGCGC TCTAGCGAGG TTCCCTCCGT CCCCGGGTTC GTTTTTGGCT CCGACTCACT CTGATATGTG CACCGTGTGT GATTTTATCA CGAAGGCTGG ACATATGTTT GTGAGAACGA GGC 
Length9663
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus3631
2.44949 Virus3363
2.82843 Virus3578
3.31662 Virus3561
4 Virus3489
4.12311 Virus3605
4.89898 Virus3714
5.65685 Virus3815
6.16441 Virus2968
6.7082 Virus3842
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression