| Annotation |
|---|
| Description | Pokeweed_mosaic_virus|plants|ssRNA |
| Sequence |
AAAATAAAAC AAAACATCAC AACATAACAC AAAACAACAC ATCCTATCTC AAGCTCGCAG ACTTTCAAAG CATTTACAAA ATCTTTGAAA CTTCAAAGCT TTCACTATTC GCAATGGCAA CAATCTTGTT CGGTTCTTTC CCAGTTGACA TGGCCCCATA CTTGAATGGA GTTTCTATGT CACCACCCCC GACACGTTAC CTCAGAGCAG CAGAAATTCC TCAACCTGAA GAGGAAGAAA AGATAGATGT CCTTGAAGAA TTTTCAAGGC GAGTTAATGC TGAACGATGT AACCGAACCT TCATGAAACA AAAGCACGTA ATGAAGGGAA GATACTCTCA ATGGGTGAAC TTCACCAAAC GAGAGTTGCG TGAACAAGCA CGCAAGAAAA GGGATGAGGA GGTCAGGAAA ATCTTCTTGT CACAACCTGA TTCAGTTCTG ACTCGCATTT CAATTGCGAG AGGTCCGACA CCTAGTGAAG TGGAATCACA AACCCCACCA AGGCGACCAC TGAATCGAAG CAAGCGGGTG AAGAAACCGC AAACAATGAA ACAAGTCTCA ATGGACACAG AGTGCACTGA GGCACTCATT CGTTGCGTGC GTAAAATCGC ACGTAAAAAT GAACTTACAG TTGAAATTGT AGGCAAGAGA GCCTACAAAA TCTCACCGGC CAAGTTCCGC GGCTGCAACA TTCCTAGGGT ACACGTCCAT CACATGGATG GCAAGAAGAG GAGTATCGAT CTGAAGATAC ACCCAAGGGA TACTGAATTC CTCAACATAT GTATGAGGCA ATTCGTCACA AAACAGAGTG TGACCACAGA CCAGCTACGA AATGGCGATA GTGGCCTTAT GTTCCTTCGA AACAATGTTA TGGGAACCAT TAGCCGATCT CGCGACTGGT TTATTGTTAG AGGTTCGCAC GAAGGAAAAT TGTATGACGC AACAATTCGC GTGACAGACG CAGTACGTCG CACAATGAAC CATTATTCGG TTGCTGAGAC GTTTTGGAGA GGATTCAACA GTTGGTTCCT CAAACACAAA GCAACTACAG ATCACCAGTG TGAATCAAAT CTACCAGTAG AAGACTGTGG AGCCGTTGCA GCACTTCTTT GTCAAGTTGT CAACCCATGT GGGAGGATAA CTTGTGAGAA ATGTCTTCAG CAAATTGAAG ATATGACAAC AAAGACATTT TTCTCGTTAG TTGCCGAACG GAGTCGAACT ACAATCGAGA TTCTTCGCAC GAAGTTTCCG AGGTTTAAAC ACTCCATAAA GCTTATGGAA CGCCTGATGA GCATTGAAGA GGACAATACA GCATTTGAAT CTTTCAGAGA AGTAAGACTG CTGGTGGGTG AGAGAAATGA TGGTGTGTTC CGACACATTA ACAAGCTGAA TGATTTGTGC GCACTCGGTA AACAAGCAGA TGCTGATCAA ATGAAGGCAA TTGGAGCAAA CTTGCTTGAA ATTGCTAGGT TTATGAAAAA TCGAACAGAA CACACAAAAG CTGGCAGCTT ACAACACTTT CGAAACAAGA TTTCAGGAAA AGCACACGTC AATCCAACAT TAATGTGTGA CAATCAGCTT GGGAAGAATG GAAATTTCCT GTGGGGTAAG CGGGAATACC ATGCTAAAAG GTTCTTTGCA AACTACTTCG ACGTCATCAT ACCGTCTGAA GGTTATGACA AATTCATTGA ACGCATTGGA CCGAATAGCA AGAGAAAGCT TGCGATTGGA AATTTGATCG TATCCACAAA TTTTGAAAAA CTTCGAGTGC AATTAGAAGG CGAGCGGATT GAACCAGAAT CACTCACTTC TGCGTGTACA AGCAAGCTTA ACGGAAACTT CAGGTACCCA TGTTGCTGCG TCACTTTAGA TGACGGCAGA CCAGTGTATT CAGATCTGAA AATGCCAACC AAAAATCATT TGGTGCTTGG TAACACTGGA GATTCGAAGT ATCTAGATTT GCCAGTTGAC ACTGAGAACA AAATGTACAT AGCGAAACAA GGCTATTGTT ACATTAATAT CTTTCTAGCC ATGCTGGTAA ATGTTGATGA AGAGCAGGCA AAAGATTTCA CAAAAATGGT GCGCGACACC ATAATACCTG CTTTGGGAAC ATGGCCATCA ATGATGGATG TAGCCACTTC GTGTGCCTTC CTAGTGGCCT TTTACCCCGA CACAGCCAAT GCTGAATTGC CAAGAATCTT GGTGGACCAC AAGAACCAAA TGATGCATGT CATTGATTCA TTTGGCTCAC TGACGACTGG GTACCATGTT CTAAAAGCCA ATACGATCAC TCAACTAACC CAGTTTGCCA GCAATTCATT GGAGTCTGAA ATGAAGCACT ACAAGGTTGG TGGTCTTAGT AATTGCCAAG ATATATCTCA TGATGCGGCT CTACAACTCT TAATACATGG CATCTTTAGA CCTAAATTTC TGAAAGAAAT TTTGGAAGAG GAACCATATT TGCTGGTCAT GGGCATTGTT TCCCCAAATG TGTTACTTGC CATGTATAAC AATGGCGTTT TCGAGCAAGC ACTGCAAATG TTTCTACGAT GTGATCAAAG TTTGACAACT ATGGTCGCTA TATTGAACAC CCTTGCAGTG AAGGTCTCAG GCGCCTCATT GGTAGTTGAG CAACACAGGA TTATTCAAAG TCATGCTGGC TTAATCATGG ATCAAATCTT CCGTGGCACC AGGCCAAACT TTTCATATAT GACGGCGATT AACTACCTTT TGGTTGTTGA TGCGCGTAAT GAAACAGACG CAGGGTTAGA AGCCATAGGT TACCGAACCT TCTTTGAAGA AACCCAAGAA ATTTGCGAAA AAAATTACAT CGCACGATTG GAGGCTTCAT GGGCCGGGTT AAGTTGGTTG GAAAAATCCT ACGCAATTTG GCATTCAAGA AAGTACTTGC AATTCGGGCG AAGATTGCGC AAGTTCAAAA ATACAACGCT CTCGAGTCCT GTCTGCAGCA TGTCCATAAC ACAATGTGCA GGACAAATCA CACAAAGCGT GAAGCAAACA GGCTGCAAAA TCATCACTGG TGGAAGAAAT GGCATGACAA AGCTCTATAG CAAGACAATG CTATTTTGCT TCAGCAGACT CCGCAAATTG CTTCCTGACT TTCTCAAGCT CTTGAACATA CTTCTATGTT TGAGCGCATT AGTTGCAATT GCACAAGGAA CAGCCTCCAT GTTGAACGAA CACAAAAGAC TGAAAATGGA GATTGCGGAG AAGAAGTTTA AAAACAATGA AGAGCATTTG GTGCGCTTTA AGAATTACTA TGACTTCTCT CATCCAGATG GGACTGAGGA GGATTTCTTG GAAACTCTGA AAGATTCAAG CGCGGAATTA TATGGACACT ACAAAGATGT TTATGTGGCT CCAAAGCCTG GTGTTGTCTT CCAAGATGCA AAATCCGATT CTCGAAAGAT GGAGCAAGGC ATAGCAATGA TAGCTTTGAT TCTAATGGTC TTTGACACTG ATCGCAGTGA CTGCGTGTAC AGGACATTAA ACAAATTCAA AGGAGTTATG TCATCGCTTT ACGCGAAACC AGTTTCTTTC CAAAGCATAG ATGATATAAA GCCAACACTG GAAGAAAAGA ACATGACAGT TGACATAGTT CTTAGTGGGG ATGATGCAGT TTCAACAAAC ACACAAGAGA TCACATTTGA GAAGTGGTGG TCTCTCCAAT TGCATAGGAA TGCCGTACGC CCACATTACC GCACGGAGGG GAAGTTCATA GAGTTTACTC GATCCCAAGC AGCAGCGATC GCATTGCAGA TTGCCCATGC CGATGAGAAT GATTTCCTAA TCCGAGGTAA TGTTGGGTCA GGTAAATCAA CGGGTCTACC TTTTCACTTA AGTAAGAAAG GCTCGGTACT TCTGATTGAA CCAACCAGAC CACTGACAGA GAATGTCACA AAACAGTTGA GGCATGATCC GTTTTATGCG AAGCCAACAA TTCGTATGCG CGGTTTGTCA GCATTTGGTT CAGACCCAAT AACAATCATG ACCACTGGTT TTGCACTGCA TTTCTACGCA AACAACATGG ACCAGCTCAA AAATCTCGAC TTCATAATAT TTGATGAATG CCATGTAACA GATGCATCTG CCATGGCCTT CCGAAATTTA TTATATGAGG TTGATTATAA AGGAAAGGTC ATAAAAGCAT CAGCAACCCC ACCAGGCCGA GAAGGCGAAT TCAAAACCCA ATACCCAGTG GATCTTCGAG TGGAGGAAAG TCTTTCATTT GATGAATTTG TAACAGCCCA AGGTAAAGGG ACTAACGCTG ATGTAGTGCA ACGTGGCGAC AACATTCTTG TGTATGTTGC TAGCTACAAT GAAGTCGACC AACTTAGCAA GTTGCTCATC GACAGAAAGT TTCATGTCAC GAAGATTGAC GGGCGAACCA TGAAAATTGG TTCAACTGAA ATCAAGACAT GTGGTACCGC TGAGAAAAAG CATTTTCTAG TCGCAACGAA CATCATTGAA AATGGTGTCA CACTTGACAT CGATGTTGTT GTCGACTTTG GAGTCAAAGT GCAACCCACG CTTGATTGTG ACAATCGCAT GGTCTCATAC CGGAAGGTCA GTATATCTTA TGGAGAGCGG ATCCAAAGGC TTGGGCGAGT TGGCCGTCAC AAAGCTGGCG TGGCCTTGAG AATAGGTCAC ACTGAAAAAG GGATTATGGA AATCCCACCA ATTGTTGCGA CTGAAGCAGC ATTTTTATGC TTTACATATG GACTTCCAGT TACAACTCAG AATGTCTCAG TGAGCCTCCT TTCACAGTGC ACCGTCAAAC AAGCACGGAC AATGGTACAA TTTGAGTTAC CAATTTTCTA CACACAACAC CTTGTTCGGT TTGATGGAAC AATGCACCCA GCAATACACA ACATTCTGAA GCGATTCAAG TTGCGCGATA GCGAAACAAT TCTCAACAAA CTTTCTCTGC CATACAAACA GACAGCAGTC TGGTTATCGG GCAAGGCATA TAGGAACCTG ATCGGCACAA CATTGCCAGA GACCGTCAAA ATTCCTTTCT TTGTGAAAGA CGTGCCAGAT AAGATGCATG AGGAAGTATG GGACGCTATC CAACAACACA AGCAAGATGC TGGTATTGGT AGGCTAACAA TGGCACAAGC AACTAAGGTA GCATACACCT TACAGACAGA CATTCATGCC ATTCCACGCA CATTGCGTAT CATCGATTTG CTACTTGAAG CAGAGCAAAC AAAGAAAAAC CATTTTGAAT CGGTTGCTTC ACAAAGTTTG TCATCCACAA ACTTTTCTTT GTCATCCATA ATGACTTCTT TACGGAGTCA TTACACACGG AATCACACTG CAGAGAATAT TGAAATTCTC CAGAAAGCTA GAGCTCAACT TCTTGAATTT GCAAATCTTG GGCACGACCC CAGTGCAACA GAGCTAGTTA AGAATTTCTA CTATTTAGAG GCAGTTGAGT TCCAAAGTCA AGCTGGTGTG GCACAAGCCT TGAAACTCAA GGGGATATGG AAGAAATCCT TGATCACACG AGACCTGCTC ATAATCTTTT GTGTGTTCAT TGGAGGTCTG TATATGATCC TTCTCTATTT CTATGAGACC TTCCATTCTG AAGTTAAATT TGAAGGAGCC AAGCACAAGA ACCAGCGTCT CAGGTTCCGA AATGCCCGGG ATAGAAAACT AGGATATGAG GTACATGCTG ATGATGACAC AATTGAACAT TTCTTTGGTG CAGCATACAC AGAAAAGGGC AAGAAGAAAG GAAAGACCCA TGGCATGGGC AAGAAAAACC GGCGATTCAC ACACATGTAT GGGTACGACC CAACAGATTA CACTTTCGTC AGGTTTGTGG ATCCATTGAC TGGAAAGACC CTGGATGACT CGCCATACAC CGACATTAAC CTCATCCAAC AAGCCTTTGG TGAAGAGAGA ATTCGGATGA TTGGCGAAGA TGAATTAGAT CCACAGCAAA TCATGAACAG CCCAGGATTG AAAGCTTACT ACGGGAATCA GACAACTAGG AAGGCATTAG AAGTTGATTT AACACCACAC AACCCACTTC TAGTTGGTCG GAACACAAAC TCAATCTCAG GGTTCCCAGA AAGAGAGGGT GAATTACGAC AGACCGGCCA AGCACGACCG ATCAATTTTG ACCAGATTCC TAGGGAAGAC GAAGTGTCAT TTGAATCACT CTCCATGTTG CGGGGAGTTA GGGATTACAA CCCGATAGCT TCAGTGATTT GCCAGCTAAC GAATGAATCG GAAGGAGAGA CAACAACGCT GCATGGAATT GGTTATGGTC CCTACATCAT AACCAATCAG CACTTATTCA AACGCAACAA TGGTAACCTG AAAATCATCT CACAGCATGG GACATTTCGA GTGCACAATA CGTGCAACTT ACCATTACTT CCAATCAAAG GACAGGACGT GCTAATCATG AGGTTGCCAA AAGATTTTCC ACCCTTCCCA CAAAGAATCA AGTTTAGAAC ACCCGAAAAG GGGGAGAGGG TTTGCATTGT TATGAGCAAC TTTCAAACGA AAAGCATATC TAGTATGGTA TCAGAGACAA GCCACATCTA CCCAGTCCCT AATTCATCAT TTTGGAAACA TTGGATTTCC ACCAAAAATG GGCATTGTGG CTCACCAATC GTGGCAACTA GAGATGGAGC CATCCTTGGC ATTCATAGCA TTGCAAACAC AGACAACACT GGCAATTATT TCACCTGTTT TGGCGAAAAG TTCTCAGAGA AGTTTGATGA GCTAGTTGCC AATGGTGATT GGACTAAAGG TTGGAAATTC AATGCGAACA CGATTGCATG GGGTTCGCTG TATCTAAAGG ATAGTGTGCC TGAGGAGACT TTCAAAATCA CGAAACTAAT CCAGGATTTA GTTGGTGGTA GCGAAGTGTG TTTACAGGCA ACAACTCAGA GCAAGAAGTG GATGTACGAT GCACTTGAGG ATAATCTCAG ACCAATGGCC ACAATGGATG GCAAACTGGT CACAAAACAC ACAGTTAAAG GTAAGTGCTC ACTGTTTGCA ACTTACCTAC AAGTGGACCA GCAGGCACAA CAGTATTTCA CACCATTGAT GGGCAGCTAC AAACCAAGTC GTCTCAACAA AGAAGCCTAC ATTAAAGACT TGATGAAGTA TTCGAGTGTG ATAGACATAG GCTTGGTGGA CTGTGAAGCA TTTGAGAGAG CGGAAAGAAA GCTATACCAA CGATTAGTGG AGTGGGGATT TGAGACTTGT GACTACATTA ATGATGAAGA ATCAATCCTT GCGTCACTCA ACATGAAGGC AGCCGTTGGA GCTCTCTACC AAGGAAAGAA GAGAGATTAC TTCCAGGGTA TGGACAACCA ATCAGTTGCT AACTTGATTA AGGCGAGTTG CAAGCGACTT TTCCTTGGCA AGTTGGGCAT ATGGAATGGT TCCCTGAAAG CGGAACTGAG ACCAGAAGAG AAAGTGTCGC AGAACAAAAC TCGTACGTTT ACAGCGGCAC CATTAGACAC ATTACTTGGT GGCAAAGTTT GTGTTGATGA CTTCAACAAT CAGTTCTACT CACTAAACCT TAAATGTCCG TGGAGTGTTG GAATGACCAA GTTCTACGGT GGTTGGAATT CACTGATGAC TCAACTACCA GATGGGTGGT TGTATTGCGA TGCTGATGGT TCTCAGTTTG ATAGTTCTCT ATCACCGTAT CTCATCAACG CAGTGCTAAA CCTACGCTTG TCATTTATGG AAGATTGGGA ACTTGGCGAA CAAATGCTCA AGAATCTCTA CACAGAGATC GTCTACACTC CAATTGCCAC TCCCGATGGA ACAATTGTCA AAAAGTTCAA GGGGAACAAC AGCGGACAAC CCTCCACTGT TGTTGATAAC ACACTGATGG TTATTTTGGC TATGTATTAT TCATTCGAAA TCCATGACTT GAGTGAACAC GATTGTGTTT TCTTTGTCAA TGGTGATGAC TTGTTGATAG CCATACAACC TGAAAAGGAG AAATTCCTTG ATGGGCTAAG TGAGACATTT AGAACACTTG GGCTCAAGTA CGACTTTTCG AGTCGCACAA AGAGACGAGA GGATCTATGG TTTATGTCAC ACTGCGCGAT TAAGCGCGAA GGGATATACA TCCCGAAATT AGAGCCAGAA AGAATAGTGT CCATCCTGGA GTGGGACAGA TCATCTGAAC CAACACACAG ACTGGAAGCT ATTTGTGCAG CGATGATTGA GTCATGGGGC TATGACCAAT TAACCCACGA GATTCGTCGT TTTTACAAGT GGGTACTTGA ACAAGCACCA TATGCACAGC TGGCACAAGA AGGAAAGGCA CCATACTTGG CTGAAAGCGC CTTAAGGAAT TTGTACCTTG ACAAAACACC AACTGAGTCT GAACTTCAAC AGTACATCTC ATGTTTTTAT GAAGATGAAT TAACAGATGA GCAAATTGAA GTTTATTTTC AATCTGATGT CAACGCAGGT GTTGGAAGGC CAAGTAAACA GCATGACCAG CCTAGCTCGT CACAACAGAT TCAGCAGCAG CAGGCTGCTC CGCCCACACC TCAACATGGA GATTCCGATG TTAATGTGGG TACTAGAGGA ACATTTAGTG TTCCGAGACT CAAGGGTTCA ATTTCAAAGA TGTCACTTCC AAAGCTAAAA GGTAAGCCAA TTGTTAACTT GGACCACCTT TTAGGATACG ACCCAGAACA AACAAGCATT TCAAACGCCA AAGCCACTCA AAGCCAATTG AGTGTGTGGT ATGACACAGT CAAGGCCAGC TATGACGTAG ACGATGAAGC CATGAAGATA CTTTTGAATG GATTAATGGT GTGGTGCATT GAAAATGGCA CCTCACCAAA CATAAATGGC TCATGGGTTA TGATGGATGG GGATGAGCAG ATTGAATACC CCTTGAAACC GATTGTTGAA AATGCAAAAC CAACACTGCG ACAGATTATG ATGCATTTCA GCGATCTTGC GGAAGCGTAT ATCGAGAAGA GGAATCTGAA AGAGAAGTAT ATGCCTCGAT ACGGCTTGAT CCGCAATTTG ACAGACATGA CTCTCGCACG CTATGCCTTT GATTTCTACG AAGTGACTTC CAGAACACCT GCACGTGCAA GAGAAGCACA TATACAGATG AAGGCAGCCG CTTTACGAAA TGCTAGCACC AAAATGTTTG GTCTAGATGG CAACGTGGGG ACGAAAGAGG AGAACACTGA GCGACACACA GCAGAGGACG TCTCCCGTGA GATGCATAAT CTCATGGGTG TTCGTATGGT TTAGTCGCAC TGGGCACCAT TATGGCACCT CTACAAGTTA TGTGCTATCT ATGTAGTTTA GTAAGTTAAT ATCCGTCTCA CTGCGGGCAT CATGGTGTTT GCTACATGTA TAGCGGTCCA GAAGGAGCTC TACGTGTATC CTCCCATGTA ACCTCGTACG CTCTTTACAT TTGGATTGGG TTTCTGGAGT GAGGTTTTAC CTCGTGAAGC ACATGTACAC TTGTAAAAGA GG |
| Length | 9512 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|