Detail



ID : Virus3142

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionDaphne_mosaic_virus|plants|ssRNA
Sequence
AACAACTCAC ACAACATATT CAAAACAATT CCATCTCAGA AAAACTGATC AATTTCTCTT GTGAAATCGT ACAAAGGTTT AAGCTGATAC GAAGCGTCAC CCTATATATC TTTAATCATA CGAACTTTGT GAGACTTCTG TCAAAAGAAT ATTTCAAAGA ACTATGACAA CTACAGGAAG CATTATGATT GGCTCCATGC ACATTCCTAT TGGAATGCAA AAGGCAGAAA AGAGCGGCAA GACCCTCGCT GATATAGTAT ACAGTGAAGG ACAAAATATT GCACAGAACT TGCAAGCCCA CATTCGTGTG GAAAATACAA ACAGAGTGCA ACAATGCTCT GCGCTTGAGG ACCTGATCAA CGCATATGAA GAGCAATATG AGGACCATGT CGAGAGAATC GACAAGAAGT TGAAACGCAA GCGAGCTTGG ATCACCAGGC GGATGGAAAA GCGAATTGCC CGGAAGCAAC CAGCGAAGCC ATACGAAGGG CCAGCCAACG ACTCAATTGT TGATTCAATT GATGTGACTG AGGAGTACAG AGTGGCCAGC GGAGGAGACG AAGCAACCAC GTCTGTACAG ACACTTAAAT CTCAACTTAA GAGAAGCAGG TGCAAGAAAA TCACTGAGAG GAAGTTACAG CTCAGTGAGA CACAGATAAC AAACCTGATT AGAGCTATCA GTAAGATAGT GAAAAGGAGG GGGGGCACTA TCAGTGTCAT TGACAAGAGT GGCGCAAATG ATATCGAATT GGCGCGTGGG AAGGTGATGG CTAAAGTTTA CCACTTGCGT GGCAGGAAGC CACGAATCGA TCTCAAAACC CTCAAACATG GGGGTGAAAA GATCTTGGAA GACATTTTTG AGGCCACAGT GCCTCTTACA ATGGTGAAAG ACGAAACAGT CAAAGCAGGA TGTAGTGGTT TCGTTTTCCG GTATGACAAG CTTCATGCAA TAAAGAGTAG GGCAAAGGGC AAGTTCTTCA TTGTGAGGGG AAGACATGAA GGTAAATTAT ATGACGCTCG TCTCAAAGTG ACCAACAGCA TCAGGAACAC AATGCACCAT TATTCATCGA ATGCTAACAA ATTCTGGGAC GGTTTTGAAA AAGAGTTTAT TGGCATCAGA TCTAAACCTG ATGATGGCCA CGAATGCTCA CAAGACTACT CTGTTGAAGA TTGTGGAAGA GTTGCAGGCA TACTTGCGCA AGTGATTGCA CCATGCTGGA AAATCACATG CACTAAGTGT GCGCACGCTG ATATGATGAG CACCAGTCCG AACTTGGACG AGACGATGCG CTCAAGAGCC ATGCAAGCCA AAGAGTTAAT TGCGAAAGAC TTAGCGCAAT TCGACCACGT AGTTTCATTC CTAGATCGTT ACATCTTAGC GCTTAGCAGG CGCAACACAT CAGTGGATGA AACGATTGAG ATTCAGAGAC TCATTGGTGA TATAAAGACA GATCCATGTG CAAGTTTGAA TTTCATGAAT GAAACTCTCC AAAGGAGTGA TAGACTGAGC AGCGAGGATT TCTCAAAATG CACGAAGTCA CTTCTTCAGG TTGTGCGATG GGTTAAAAAT CGCACAGACT CCATCAAACA AAATGATCTT AGCAGATTTC GGAATAAGAT TTCCGGAAAA GCCTTAATAA ATCCTAGTTT GATGTGTGAC AACCAGCGTG ACAAGAACGG TAACTTTGTC TGGGGTACGC GAGGGTATCA TGCCAAAAGA TTTTTCAACA ACTTCTTTGA GCGTGTAGAC TCAACCAACG GATACAAGAA GCATATCGTT AGAACGTTTC CAAATGGCCA GCGTGAGCTC GCAATTGGGA ACCTAATTGT ATCCACGAAT TTCTCTTTGT TACGACAGCA AATGGTTGGA AAATCGGTGG AGAAAGTTGC GCTGACAAAG GAATGTGTTA GCAGGCGAGA AGGGAGTTTC ATATATAGCA ATTGCTGCGT CACAGATGAC TCTGGCAATC CATTGCTATC AGAAATTAAA ATGCCAACGA AGAACCACCT TGTCGTGGGG AACTCTGGAG ACCCAAAATA CGTCGATCTA CCGAGCGATG AGAGTGGCAT GTTCATTGCC AAAGAAGGAT ATTGTTATAT GAACATTTTC CTTGCTATGT TGATAAATGT TAGTGAGAAC GATGCGAAGG ATTTCACTAA GATGGTTCGG GATGTTATAG CAGAGAGACT CGGAAAGTGG CCTAGCATGC TTGACGTTGC AACAGCTTGC TTTCTATTAA CAGTATTCCA TCCCGACACC AAGAATGCAG AACTTCCCAG AATATTGGTC GATCATAAAA CGAAAACCAT GCATGTCATC GATTCATATG GATCGATGCA TACAGGTTAT CACATTCTCA AAGCCAATAC AGTCAACCAG CTTATCAACT TCGCAAGTGA CAACATCGAA TCTGATATGA TTCACTACAG AGTTGGTGGC ATGCCAACAA AGGATGCGCA TGCAGTGAAG AAATTGACGC GATGCGTTAT GCATGCGGAA GCGCTTAAGC ACATGCTATT GGAGGAGCCG CACATAGCAT TCTTTGGCCT CGTCTCACCG AGCATATTGA TTGCACTGCA CTCGAGTCCT TCCTTGGAAA ATGTGATTAA CCATTGGTTG AGCAGAAATG AGGGAGTTGG AATTTCGCTT CTCAAGTTGC GTTCGCTTAC CGAAAAAGTG TCGCGGGCCA GATTTTTGAA GGACCAGCAC TCACTAATTC TCACATCAGC AAGTGCAATG CTCAAGAGTC TGCAGGATAG TGATTATGTC AGCTATGAAA AGGAGCGAGC ACATACATTT ATATTCGACA ATTGTGGAGA AATTCGAATC AGACCAGCAA TTGATCAGAG ATGGTTTGTT TTGCGTAGCG ATGAAGAGCT CATAGCTATC GAAAAAAACT ATCAAAAAGA ATTGAAGGAC TCCTACAACG CATTAAACTT GTCGGAAAGA TTGCGAGTGG GCTGGCGGTC TGTAAGATAT TCAAGCTTAT TCGAAAAATT CACAATGATG GGCGCTGTGA GCGATTTGAA AGAAACAGCA GAGCTCTCAT GTACATATGG TTTGAGAAAG GTGCGGACAG CAGGCGGAGC AGTGGTTACA CTATGTCGTA AAGCATCAGC TAACGCCTGT AGTGCAGCTT TGAAAACTTT CGCAAATGTT GTATGTTCGA CTATCAGCTA TATGATACCG GACATTGTCA AGTTTATGAA TGTCTTGGTC GCTATCAATC TCTTGCTAGC CGTGTTTAAC AAACTCAGAA GCATTGCAGA CCAGCATCGC ACAATGAAAG CTAGACAAGC GGCAACAGAT GAGTACGTTC AGGTTTGCGA GATTGGTGAG ATATACGAGC GGCGCAGATC AACCACGGGA CATTTCCCGA CCTTTGATGA AGTTCGCGAG GAAATTTCAA AGTGCAACCA CAAATTGTTG CCAACATTCG AAAGAGTTTA TGGCTCAACA ACAGAGTATG AAAGTAAGAG TGCCGAAAGT CAACAATACG AAAAGTCACT CGCTTTCGTA GCTCTTCTAC TTATGGTCTT CGACTCTGAG CGAAGCGATT GTGTCTACAA AGTGCTGTGT AAACTGCGCG CACTAACAAA CATTTGTGGT GAGCGAGTGC AGTACCAAAG TCTCGACGAC TTCGAGAATG TGGCGGATGA TAAGAAATTG ACAATAGATT TCGAGTTGTC GAGCGAGATG CAATCACAAT CTACAAGCGG AGACATGATG TTCACAAAGT GGTGGGACAT ACAAGTTCAG ACTGGTCGAA CGGTTCCACA CTATCGTTGC GAGGGTGAGT TCAGTGAATT CACGCGCGAA ACGTGCGCTG AGATCGCGAA CAAAATTGCG CACTCAGCCC AAAAGGAGTG GATAATCCGC GGTAACGTAG GGTCTGGTAA ATCAACGGGA TTTCCCAAGG CACTTAGTAA TCGTGGGAGA ATTTTGGTCC TTGAACCAAC ACGACCTCTA GCTGAGAACG TTTGCAGGCA ATTACGTGGG GAGCCATTCT TTGCATCACC AACCTTGAGG ATGCGAGGCT TGTCGTCATT TGGATCGGAT CCGATCACAA TTATGACAAG TGGTTATGCA TTCGCGTTCT TTGCGAACAA CCCACTCAAG CTCAAGGAAT TTGATTTCGT TCAAATGGAC GAATGCCACG TTGTTGACGC GAATTGTATG GCTTTTTACT CATTGCTACG CGAATACGAA TTCAGTGGAA AAATTTTGCG TACGTCAGCA ACACCGCAAG GAAGAGAATG CGACTTTCAT ACTCAATACC CAGTCGCCAT GCACAAAGAA GAGCATTTAA GTTTCGAGAG TTTTGTTACA GGGCTAGGGA CGGGAGTTGC ATACGATGCT TTGGCGCATG GATGTAATAT TCTCATTTAT GTTGCAAGTT ACAATGAAGT CGATACACTT GGGAAGATGC TGACTGACAA GAAGTACCAG GTCACAAAGG TGGATGGGCG AACCATGAAG ACAGGGCAGA TTTCAATCGA GACTAAGGGG ACAGAAGCAC ATCCACACTT CCTAGTTGCA ACAAACATAA TCGAAAATGG TGTCACACTC AATGTTGATG TCGTCGTAGA TTTTGGAACG AAGGTTGTAG CTGACTACGA TATTGACAAT CGGAGTATGC ACTACACTAA GAAGCCAATC TCGTATGGCG AGAGATTGCA AAGAATGGGG CGAGTGGGTC GTAGAAAGGC AGGGTTTGCA CTTCGCATTG GCAGCACGCA AAAAGGAATT CAAGAGGTGC CAGTGTCAAC CGCTACGCAA GCAGCATTCA ATTGTTTCGC TTACGGTTTG CCAGTCATGA CAGCAAATGT TTCAACTAGT TTGATGGCAA ATTGCACAGT GCGACAAGCG CAAACAATGA ATTGCTTTGA GCTACCGAGT GTGCTAACAT ACTCACTCGT TGCTAGCGAT GGCTGCATGC ATCCAGATAT CCATGCAATA TTGAAGCCTT ATAAACTCAG CGAATCTGAA ATTTTGTTGC GTGAAGGAGC CTTCAACTTT GAAAGCACAA GCTCTTGGAT GACCGTCAGG CAGTACAATC GGATCGGAAT GCGGTTAAAT CTTCCCGACG ACACAAAGAT ACCATTCCTC ACGCGAGACG TGCCGGAGGG AGTGTACGAG AGAATATGGC AAGTGGTGCT TCAAGTTAAA GCGAAAAACG GCTGTGTTAG AATGAACTCC TACTCGGTCG CTAAAGTTGC GTACACGCTT AAGACGGACG TTAACTCAAT TGACACAAAT CTACAGTGCG TGGAATCGCT TTTGCAAGAT GAATACGCGA AGGAGGCACA AATGCAGAGT TTGAGCACAA TCGTCAAGCA AGGGAGCAGC ATATCAATGC TGAGTGTGAT TAATATGATT AAGCATCGGT ATGCAAAGAA CCACACCAAG GCCAACATTG AGAAGCTGAC AGCCGTTAGG GATCAACTGC GAGAGTTTCG CAATATCTCA GCAAATGGCA TAACCGATGA GATAATTGCA GCATATCCTA AACTTGAAAG CGTTATGTAT CAAGGGAAGG ACGCACTGGC AAATTTCTCT GGCGTTCAAG GGAGATGGAA TGGATGGCTG ATAACGAAAG ATCTTCTCGT TGTTGGTGGA GTAAAAGCCG GAGGTTTTTG GCTTTTATAC AGCAGCTTTA TTCATCGCAT GTCGGAGCGA GTGGAGTACC AAGGAAAGAA TAAGACCAAG AGACTGCGTT TTCGAGATGC AAGAGATCGA AAGATGGGAA GAGAAGCATA CGGTGACGAT GGTACTATTG AACATTACTT TGGTTCAGCG TATACAAAGA AAGGCAAAGA AAAGGGTTAC ACTCGCGGTA TGGGCAGTAA GGGCAGTAAG GCACGGAAAT TCAACACCTT CTACGGGTTC GATATTGACG AGATTAGTCT TATACGATAT TTGGACCCGC TTACGGGAGT TACGTTGGAC GAGCAACCTT ATACTGATAT CGCTATAGTG CAAGAGCATT TTGGCAACAT CAGACAGAAG ATGGTTTTGA GTGATGAATT GGATCCGCAA AAGATTATTT CAGAGCCAGG CATTCAAGGG TTTGCCATTC GAGATGGTGC GAAAAAGGTG CTCAAGCTCG ATTTGACACC TCATAATCCT CTGAAAGTGT GTGATCGTTT CTCAACAATC GCTGGCTTCC CAGAGAGAGA ATCAGAGTTG AGACAAACTG GTAAAGCAGT TGAAATTGAT CGATCTGAAA TCCCAAAGCC GTCCAAAGCC CAAGTTGAGT ATGAAGGGAA GACCGCGATG AAAGGACTGC GCGATTATAA TGGTATTGCA TCATGCGTGT GCGTCGTGAA CAACTTCTCG GAGGGAGGCA GTAGTGAGAT GCATGCAATT GGCTACGGTT CTTACCTGAT CACCAATGGG CATTTCTTCA GACGAACCAA TGGCCACATG ACCATCACGT CCCACCATGG AGAGTTTAAA GTTCATAACA TCAGGCAACT GAAAATATTT GGCATCCCCA AAAAGGACAT GGCCTTAATC AGACTGCCGA AAGACTTTCC TCCATTCCCG ATGAAATTGA GGTTCCGAGA ACCAATTGCT GGTGAGAATG TCGTGCTAGT TGGAAACAAC TTTCAAGAGA AATACATCAG TAGCATGGTT TCTGAATCTT GCCACACATA CCCAAGGGAT AATGGCGGAT TTTGGAAGCA CTACATCTCA ACGAAGCAGG GTTCGTGCGG GCAGCCCTTG GTCTCAGTGG AAGACGGGTT TATTGTTGGG ATCCACGCTT TGCACAGCAA TGAAAGCAGC GTCAATTATT ACACGAATAT AATTGATGGA TTCGAGAAGA ACATCTTAAG CAAACTCGTT GAACTGAAAT GGGAGATGAA CTGGGCGTAC AATCCCAATA ACGTCTGCTG GGGCAGCTTG AACATTCCAG AACAAGCACC AGTCGCCTTG TTTAGACCAG AGAAAATTGC ACGAAGCATA CATGGGGAAT TGGTCATTGA ACAAGGTAAA CGGGATCGTG ATGCATGGCT ATACAACTCG CTCGAGCACA ACCTCAAGGC AGTGGGTCAG CTCGACACAA ATTTTGTCAC AAAGCACGTC GTTAAAGGAA GATGCCCTTT ATTTGCACTA TACCTAGACG CCCATCCTGA AGCTAAAGTT TTCTTTAAGC CTCTAATGGG ATTCTATGGG AAGAGTGCTC TTAATAGGGA GGCGTACATC AAGGACATCA TGAAGTATTC GAGCGTTATT GATGTTGGAC GAGTTGACAC AGACGCGTTT GAAACAGCAG CATCCAATGT TTTCCACTAT ATAAACAATA GTGGATTCGT GGAAACTACT TTTGTGACAG ACACTGACGC GATTTTCGGT TCTCTCAATA TGAAAGCAGC AGTTGGAGCT TTGTATAAAG GAAAGAAAAG CGAGTACTTC GAAGGCTCGA CGCTTCATGA TAGAGATGTA TTATTGCAAG AGAGCTGCAA AAGGTTGTAT TTTGGCCAAA TGGGAGTGTG GAATGGAAAT CTCAAAGCCG AGTTGCGACC AGTTGAGAAA ATTCGTGAAA ACAAGACAAG GACATTCACA GCCGCTCCGA TTGAAACATT GCTTGGGGCG AAAGTTTGTG TTGATGACTT TAACAATCAG TTTTACGATC ATCACACAGA GTGTCCATGG ACTGTTGGAA TTTCAAAGTT CTATGGTGGA TGGGACAAAC TTATGCGCAA GCTGCCTGAA GGCTGGATTT ACTGTGATGC AGATGGCTCA CGGTTCGATA GCTCTTTGAC ACCATATCTC ATAAACAGCG TCCTGCAAAT TCGACTTATG TTTGCCGAGG ATTGGGACAT AGGGCGTGAA ATGCTCAAGA ATTTGTACAC CGAGATTATG TACACGCCGA TCGCAACACC AGATGGTACC ATTTACAAGA AGTTCAGGGG GAATAACAGC GGGCAACCTT CAACGGTTGT AGATAACACA CTGATGGTGT TCATTTCACT CTTATACTCG CTTGAAAAGA GCGGAATTGA CACTGAAAAT TTTGAGGAAT TCATAGTCTT CTTTATCAAT GGCGATGATT TGATAATTGC AGTTCGACCA GACATGGAGA AGCAAATTCT TGACCCAATG AGTGACAACT TTTTGAGTTT GGGCTTGAAC TACGATTTCT CAAATAGGGT GAAGGACAAA AGCGAACTGT GGTTTATGTC GCATCAAGCA GTGCTCAGTG AAGGCAAGTA CATACCGAAA TTGGAACCAG CACGAATAGT GTCCATTCTG GAGTGGACAA GGAGCAAGGA ACCGGAGCAC AGGTTAGAGG CAATATGCGC TGCGATGATT GAAGCATGGG GGCACGACGA TCTGCTTATG GAAATACGGA AGTTTTACGC GTGGATCTTA GAGCAAGAGC CATACAGCCA TCTCGCAAAA GAAGGTAAGG CACCATTTAT TTCTGAACTA GCACTACGGC AACTTTATTT GAATAAAGGA ACTAAAAGTA GTGAATTTCT TGAATATCTT GATGCTTTAT GCGAGATGGA TGAATGTGAG ACATCCGAGG ACGAATCGGA AAGCGTGTGT TATCAAGCGG ATGACACCAT CGATGCAGCA GAGAAGAAGC CCAAACAGCA AAAGAGTGAG GAGAAGAAAC CGGAGGTTGC AGACGTTGTT ATACCCCGGG AGCCGGATAG AGATGTTAAC GCTGGATCTA GTGGAACTAT AAAGATTCCG CGTGTTCAGC AATTGACATC GAAGCTCGAT TTACCAAAGT TTCACGGTAA ACCAGCTTTG AATCTGCAAC ACCTACTCAC ATATAAACCG TCTCAAGTGA ACATTTCGAA CACACGTGCA AGTTTGGCAC AATTTAACAC ATGGTTTGAG GCAGTTCGAG ACGCTTATGA TGTGAAAGAT GAGGATATGA CGGTCCTCAT GAATGGTTTG ATGGTTTGGT GCATCGAGAA TGGGACTTCA CCCAATATCA ATGGAAATTG GTATATGATG GACGGTGATG AGCAATTGGA GTACCCACTC AAGCCAGTTG TTGAAAACGC CAAGCCAACA TTGCGGCAAA TCATGGCGCA TATGAGCAAT ATAGCCGAAG CCTATATTGA AATGCGCAAC TCTGAGAGAC CATACATGCC GCGTTACGGT CTCCAACGAA ATTTGACAGA TATGAGCTTA GCGCGTTATG CCTTTGATTT CTATGAAATC ACATCCAAAA CGCCAGGGAG AGCAAGGGAG GCTCATATCC AGATGAAGGC AGCAGCCCTC CGAAATGCCA GCACACATCT ATTTGGTTTA GATGGGAATG TTGGGAATGC TGCAGAGAAC ACAGAAAGGC ACACAACGGA TGATGTTGAC GTCAATACTC ATTCGTTTAC AGGAGCCAGG ATGCGTTGAT TGTGTGTGTG ATCACTCTCA GCGCTTGTGT TTGATGACGT ATTACTTTTA GATAAGCAAA GATAGTCTTT CTTTTAGAGT GGTTCTACCA CCTATATCTT TCATGTCTCT TATGTATATG TGCTTTCATT TAATGCGCCA GTGAGGTTTA CCTTCAGGTT AAATGCGA 
Length9548
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg949086
2.44949 Virus1029
6.48074 Virus3296
7.74597 Ahg918835 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
7.87401 Ahg920027 ubiquitin-related protein 3
9.16515 Ahg348272
10.3923 Ahg930302
10.7238 Ahg887450
12.8062 Ahg904265
13.4164 Virus3860
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression