Detail



ID : Virus3860

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionTurkey_astrovirus_2|vertebrates|ssRNA
Sequence
CCGAAAGTGT TGTCGGGGCG ATGGCCCAGG CGGGTCGCAG TGGCGATGCT TTTGCATCCC TTGATCAACG GCGGGAGCGC CAAGAAGAAC AGGCGCAGTC CGGCCTTGAC AAGGTGTTCT ACTTCCAAGG CGTGGTTGAA CTATTCAACC GTATGAAAAT CGCCTATGGA AGGACACCGG CTTGGACGGC CCTCATGAAG TGTAACGCCA TATACTTGAA AGATTTTAAA ACAGCAGTTG GCGTTGAGGG TACCCGCTAT GGGCTCTTTT TCGCAGAAGA AGTGACTAAA CCAACTTGGT CACCCGACAT TGGAGCAAAC TTGATAACTT TGGGCGAAAA GGCCTGTTTA GACGCCCAAA ATGCAAAATA TGAAAGATTG CAAGCCTCAC TTAAAACAAC TAGTGGCCTT GTGCATCAAG TGATGGAAAA AACTAGGGAA GCTAAAGAGA ACCTAGAGAA AGCCAATAAG ATCCAAGAGC AACTTGACAA GGTCATTGAG AGCAACAAAG CTTTACACCG TAAGATACAG GAGAGAAACC GAGAAAAGAT GCAGGAATAC ATGGTAAGGT TGCATAACAC GCAGAAAGAT CGTGATGATT GGGTTCAGAG ATGCTCCAGG TTAGAACAGG AGAATGTCAC ATTGCAGAAA AGGTTGAAGG AGAAAGAGAA CGCGCTGGTA TCTGTTGGGT GGGATCTTTT AGGCTGGATA GTTATTTCAG TGCTTGTATT CGGCCTGATT TCACTCGCAG ACGCGCAAAA CTTGACTCCA CCAGCCAAGA TTGTGATAAC TCCAGGGCAA GCAGAGTTCA TGGACCTAGC TAAATTGGAA AAAATCCAGG TCAGAAAGTA CCGACTGGAT AGTTGTGAAT TACCACCTGA GAAAGGTTGC GTGTTGTACA AGGATTACCT TACCACCAGG CCGGTAAGCT TTTTGGAGTT GATGGCCAAA TGTTCAAAAC CTGACTGGGT CTCGGAGAGC AGTTACAATG AAACAACCCT AATGGAAGAA TGCATCCAGA TCTTTGGTGC AGAGTGGTGT GAAGGGAAGC TCGTTGATCT TGTACCAAGA AAGTGTGGCG AGCAACATGT CTTAGTTAAC ATCATAGAGC AAATTGAAAA AACCAGAGAA GTTGTGACCC TTATATATGG TAAGGTGATG TCATACAGGC TAGATATGTG GATAACATCT ATTTTTAGTT TAGTTTTGGC AGGTAATAAG GAAAAATTGT TTAAAATGGC TCCCTTCATT TTTGTAGCAT GGTTTTTAAA CATACCAGTG TTTTTAACTT GTGTGGCAGT CAACATTTTT CCAGTTGTTT CCCTGCCTTT CATTTTGTTC CAGATTTTTA TGCCACAGTT TGTTTTGGTA AATGCCTTTC TTCTATGGTT AACACTCACT TTAACAGCAT TTTATTGGAG TGAGGGGCCC AAAATACTGA TGGAGATAAG TTATGCCCTT GTGTATACCA TCGGCTTTGT TTTATGGTCC CTTGGACTAG CTGTGGGGGT GACGCTCAAA TTGACAATGG TACATCAGAT ATTAATGTTT TGTGTTGTTG CCGCAGCTAT TTGCGGAACC AAGTTTGCAT GCACAACAAT AACAGTGCAA CACCCAGATG GAACAACCGC AAAATACACC CGGGTTGGTA AGCTAAAGAA TAATGTTGTG AACCAGTGCA AAAAGGTAGT CACGACATTG CAGACAAGAG GCGTTATACC AGCAACGCCT GCGAAAACAG CATCTATTGT TATTGTTGAG GGCAAAAATG GAACAGGTGT TGGGTTCAGG TTTATGAATT ATATTCTTAC AGCAGAACAC GTGGTTCAGG GATCAGATAT AGCAACACTT AAAAATGGCA GTGTTAGTGT GAAATCCAAA GTCATCAAAA CGATCCCAAT ATTTGAGAGT GTTGACAATG TTGCAGTGTT AAAATTGCCA CCTGAGCTCA ATAGCGTGAA GCCTATCAAA TTAGCAAAGA AGGTTCAAAG TGACTATCTG ACACTGACAG CCTATGATCC AAATTTTCAA CATGCCGCCA CTTTTACCGG GTGGTGTATT ATAGATGGAA ATTGGCTTAA TAACTCCTTT GATACAAAAT TTGGGAATAG TGGTGCACCT TATTGTGATC ATGATGGTAG GCTAGTTGGT ATCCACCTAG GCACACAGGG TGTTCTTTCC CAAGGCATAG TCATTGTAGA CGCATTGAAA AATACATTCC AGCTTGCGGA TCAGTGTAGA CCACAGAATT TTGACATGGA TGAGTTCCTT GAGAAAGTTA TAGCAGGAAC AAAAGTGTCA CATGCAGCGA TCCTAAAAGA ACTGGAAGAA CTTAGAGAAG AGGTGCAATT TTTAAAGAAA AAATGTGTCA CCTATGATGA CTACTGGCTA TGCCAAACCA TCTTTGGGCA GGCCAAAGGG AAGACGAAGA AAACAGTCAG AGGCCGTAAA CACCTTGTTA CCAAAAGAGC TCTTGGGAAA GGCCACTTCA TGAAGATGAG GATGCTCACT GATGAAGAAT ATCAGAATAT GATTGAAAAG GGCTTCTCAG CAGAGGAAAT AAGGGAGGCA GTCAACGCAC TCCGAGAACA AGCATGGCTT AATTATTGTA TTGATAATGA TGTTGATGAC GAAGGTGAGG AAGATTGGTA TGATGACATG GTAGAGACAG ATAGAGTTAA CCAGGAGATC GATGAGGCCA TAGAGCGGGC CATGGAAGAT CGTGGTGAGT TCTACCAGAA GAAATCCCGC CTTACCTTTG TTGAACAGGC CATGATGCAT TTGATTCAAG TGAGCAAGGA GAGAAGCCAG ACTGCTAAAC TAGAAGTTCA AAAGGAGAAT GAAGCCCAAC TAGTGAAGAT GTTTGAGCGG TGTGTCACAG ATGAGAATAC ACCTGAGGGT ACCACCTCTA TAGCGGCTTT GTCCACAGAA GATGATGTTA GGCTTGTTGA AGGGAAAGTC ATTGATTTCA CCAAAGCAAA GAACATCCCA GTTGACGGGG AAATTAGGAG AGAGATCATC CCTGGAACAA AATGTACTGA GATTTCCACT GGACCTGAAA ATAAGAAGAA CATATTGAAG AAAAAGGATA CACACATAGC TGAGGGTAAA GTTGAAACTA AGTCATCACA GCAGCCGGTT GACGTCAAGG ATGATAAACC CGTAGCCTTG GAACAACGTA AGCCTAGAGC TTGTAAATGG TGCGGTTCAT CACAGAAACA TGATTACCGG GAATGTCGGT TTCAACGTGA AAAACGCTTT TGTGTGTATT GTGCAGCTAT GCACTCAATG TTTGAGGGCC ATATAAGACC AATAGAGTGC ACTAGTTGCA AGAAAAGTTT TTCAGGAATT GAGAAGTTAG AAGATCATGT GGTCAGTGGA GAGTGTCAAA AAAACTAATA GAGGGGCCTG TGACAACAAA GGCCCCTACC CCCGTACCAG ATTGGCTTAA AATATTTGCA TGGGAAGATG ACATATTACC ACCTGAAGGT AAAACTGCCT TACCAGAAAA TGTTACTCTA ATTGGACATA TACCAGTTGA TAAGTTGGTC TCGCGCACCA AGAAAGTCCA GGATCCATTA TTAGGCCTTG TAACACCATG GAAACAAGAT ATGTATGATT CAACAACATG GACTGTAAAG GCTTACACCA AAATGTTTGA GAAATTCCAT TACCACGACC CAGTTGACTT TGTGGAACAG TATGCTGAGT TTGTGCTGTT GTGTGACAAT ATGGTGTTGA GAGAGCATGA CTATATGGCA AATAGCAACA TCACACCAAT CATGTCAACA GAGAAAAATG TCAATAGTAC ACCAGCATAC CCAAAATTCC AAGCCTATGA CAGCGAAGCC GAGTATTTGG AAGATTGTGG GTGGCAAGAG TACCTGGATG TTGTGTCTGA TCCAGAAACT ATAAATCGTA GACCCCTATG GTGGTGCTTC CTCAAAAATG AAGTTCTCAA AAGAGAGAAA ATTGAGGACA GTGACATTCG AATGATATTG TGCACCGACC CGATTTTTAC CAGGATTGGG GCTATGTTTG AGCAGGATCA GAACAACAGA ATGAAACAAC AGACTGAAAT AAGGTCTGCA CAGGTCGGAT GGACCCCCTT TTTCGGCGGC TTGGATCGCA GGGTTCGCAG GTTGTATGGT GATGGAGATA GGTATTTTGT TGAGATGGAC TGGACACGGT ATGATGGGAC TATACCAAAA TCACTATTTT GGAGAATTAG GCAAATCAGG TTCTTCTTCC TCCATGATTC TCATAAGACT CCAAAGATGC GGCGCTTGTA CAACTGGTAT GTGAAAAATC TGTTGGAAAA AATTATTTTA TTGCCAACTG GAGAAGTTTG CCAGGTCAAG AAAGGAAATC CAAGTGGTCA GTTTTCAACA ACTGTGGATA ATAATATGAT CAATGTCTGG CTAACAACAT TTGAGGTTTC ATACCTATTT TTCAAACAGC GTGGTAGACT GCCAACAGAG AAAGAGCTGC AAGAGAACTG CTCCATGATA TGCTACGGGG ATGACAGACT TCTTTCCATC CGTAAAGGGT TTGTTGAGTA CGAACCTGAT ACAGTCATTG ATATGTACAA AAACATCTTT GGAATGTGGG TGAAAAGAAA CAACATCAAA ATCCAAGATA CACCTGAAGG GCTCTCTTTT TGTGGGCTTA CAATAGTAAA ATCAAGTACT GGTGCATATG TTGGTGTTCC CAATGTGAAC AAAATACTGT CAACTTTGGA AAATCCAGTA CGTAGGCTAC CAGATGTTGA GTCTCTTTGG GGTAAATTGG TTTCCCTGCG CATATTGTGT GAAAATGCTC CCAGCAATGT TAAACACTTT CTTGATGAGC AGATTAGCAA TGTTGAGGAG TTCGCCGCCA GAGAAAACAT ACAACTTCCT GAGGTCGGGC CCGACTTCTA TTCCAGAATA TGGTGAGAGG AGGACCGAAA GAAGATGGCG GCGATGGCCG ACAAGGTCGT TGTCAAGAAG ACAACTACAA GGCGCAGGGG CAGGAGTAAT TCCCGCTCCC GTAGCAGGAG TAGGAGCAGG AGCAGAACTA AAAAGACAGT CAAAATTATT GAGAAAAAGC CAGAAAAATC CATCCTAAAG AAAATTGATC AGGCTGAAAG AAGAGATGCA AAACAGCTTA GGCGGATTCG TAAGAAAGTG CAGGGACCGC CAGTAAATTC CAGGATGACA ACAGTAGTCA CACTTGGTCA GATAACAGGC AATAAAGACA ACACCCTAGA GCGGAAACAC AAGTGCTTTC TGAATCCGCT GTTGATGAAG AGTCAGGAAA CTGGTCAAAC TGCAACACCC TTATCTGTTA GGGCATCCCA ATATAATCTG TGGAAGCTAT CCAGACTCCA TGTCAGACTT ATACCCCTTG CAGGAAAAGC GAATATTTTG GGGTCAGTGG TGTTCTTAGA TCTTGAACAG GAGGCAAACA CAGCAGGACC AGAATCAGTA GATACCATCA AGGCAAGACC CCATGTTGAA GTTCCCATAG GGTCGAAAAC CGTTTGGAAA GTGCACCCTA GAAGCGCTCT AGGACCTAGA CAGGGGTGGT GGAATGTTGA CCCTGGTGAC AGCCCAACTG ATTCTCTTGG GCCAGCACTC AACATGTGGA CCTACCTGCA AACTGTCAAT GCACTCCAGA GCGCTGGGGG CACTCAAACG CCTTACACCA GTGCACTTTT TCTTGTGGAG GTCTTGGTCA CTTATGAGTT TTCAAACTAT GGCCCAAAGC CTGCACTGTC TCAAATGGTA TCAGACAGCT TTCCACCAGC CTCCGGTTCT ACTGCAACCT TAAAAAACAC CAGTGATGGG GCTGTAGCAA TACAACTCTC AGGCGCTATC GCCCGAAAGA TGGAGGAGGT TGAGCCCAAG GGTAGGCGCT CAAATGCGCA AACATCAGGT GTCGGTGAAG TGTTCTGGGC AGTGTCCACT GAAGTAGTCA ATACAGTAGC AGATGCCATA CCAGGCTGGG GCTGGCTCCT GAAAGGTGGC TGGTTTGTCC TTAGGAAAAT CTTTGGGGCC GCAAATGACC AGAATGGCAC TTACTTGATA TACTCTTCAG TGGCAGATGC ACAAGGTGAC AACAGGATAT ACACATCAGT GAAACAGACA CAGTTGACAT CAAGCAGGAT CAACCTCGTC CAACTCACCC AGCCCAATGT GAACCAAGCA GCAGTAGGTG GCAGTGTTGG TGCGGCAAAC TCCATCTATT TGCCACTACC ACAAGCAGAT GACCAATACA CACCCTACTT TGTCTATAAT TTTCAAGGGG AAAGGGTGTC AACCACCGAG ACTGGGGTAT TTTGTCTGGC AGCCATACCA GCTGCGACTA CATCTAGTAG GTATAATAAT CAGATCACCA CTCCATCAAT TGGCTACAGG AATGCTAGTG GTACAGGAAC ATCATTCCTA CTAGATGCTG CATCATGGTG GAATATATTG GATGTAACTC AGACTGGAGT GCTTTTTGGA CAACCAAGAT TGGGTGTTGG TGTCATGCAG ACAATGAAGA CTCTCAAACA GCATATCAAG GATTACACAG AGCCTGCAAT ACAGAAATAT TATCCTGGAA CAACTAACCT TGATGAGCAG TTGAAGCAGA GATTGAACCT GGCAGAGGGT GACCCGGTCA TCTCAATGGG GGACACAAAC GGTAGGAGGG CTGCACTCTT TTATAGGACT AGTGATGAAA AATATATTTT ATTTTTCTCA ACCACAGAAG ATCCAGGGGC ACAGTATCAA AATCTGAAAA TGTTGTACTT CTGGAACTGG TCCTATTCTG ACACAAAACA GCAATTTTTG GACCACCTTA GAACAGTGCA GTTTGCAAAT TTGGATGACA GCCAGCCAGC CCCCTATGAT AGTGATGATG ATGACCTTTC TGATGTAACA TCACTTTTTG AGCAGGCTGA TTTGGGGGAT GAGACAGACT TCAAATTTAA TATGTCCATC CAAACCTCCA AACATCTTGA GGAGGAGAAA AATTACTGGA AAAACCAGTG TGAGAGGATG ATGATGGAGA AGGCCCTTTC GGGCACCTCA CAGCCTCTTG TCCGGTTTGA GAAAGCTGGA CCTAGGGCAG ACCAATCTTC TGCCAGTGGT CATTCTTGAA TGGCCACACT TTCTCTGCGG TGGAAATGGA AATCACCATT CCACCTAAGA TGATTAGCCG ATCCAACGGA AATCACCCGT TGGGTGGTGC GCGGTTTACG CATCGGGAAA TCAACCCGGT GTATTACCCG CACTTCCGGC TCAACAGTTT TTTAAAACTG ATATAAATTT ATGAAAATTT TATTAGCATT TTAAGAAAAA AAAAAAAAAA AAAAAAAAAA AAAAA 
Length7355
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg928133
1.73205 Ahg940096
1.73205 Ahg939486
5.91608 Ahg493950 Cytochrome c oxidase subunit Vc family protein
12.4097 Ahg887441 glutamine synthetase 1.3
13.4164 Virus3142
14.4914 Ahg484951 Major facilitator superfamily protein
16.0624 Ahg347252 histone-lysine N-methyltransferase ATXR2
16.9115 Ahg937131 Leucine-rich repeat protein kinase family protein
24.8193 Virus1125
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression