Detail



ID : Virus3400

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionLily_mottle_virus|plants|ssRNA
Sequence
AAAATAAAAC AAACCAACAA GACTCAATAC AACACAACCC AGCAGCTTTC AAACTCTCTT CTTTGCTTTC AAGCAAGTTT TTGATTCCTC TTTGGACTCA CAACCAGTTT CAAAGCATTC TTCTCCACTC AACGCATTCA CAACTGAAAG AGATGGCCTC ATTCACGGTC GGATCGATCC TTGTGAACAC CGCAAGCGTC CTGAAAGAAA GCTTTGCACA GAAAGTGCTC ACGACACCTC CAGTGTTGGT AGCACAGCCT GTGCAGAGGA GCTTTGGTGC GGCACGGATG TGTGCACGCA AAGCAATCGC AGATGATGAA GAGAAGGTGG CCAAAGCCTT CTCAGCTCTG GAAGCACGGT GTGCTGCCAG GGTCTCAAGG ATGGGAACCA TCCGCGTGAA GGTCACGCGG TCTGGAACCT CGCGGGCGCA GCCACTCCCA AAAAGGGAGC AGGCACGTCT TAGGAAGGCT GAACGTAAGG CACGCTTGGA TCGTGAAGAG TTTCTTAAAG GAAGCCCCAC TGTCATTGAT CACATCAGTA TAGCTGGTGG CGCGCAGCCT TCACAGGACA TGGTGGAGCC AATGTCCACA CGAAAGGCAC CATGGCATTC AGTGAGCAAG AAAGCTCGAA AAGTAATCCC GCACTCCCCA ACACTGAATG AAACTGGGCT TGCATCATTG ATGCGAGCCA TCGCAAAGAT TGGGGCCAAG AATTCCATGA AAGTTGAAAT CGTGGATGAG CGAAGAGTGC AAGCACGCTA CATAAAGCGT GATGCAGGGT CATACCTGCA AGTGCGCGTC GCGCACCATG AGGGCCTAAG GCGTAGGCGT GACTTGAAAC TCTCTGCATT TGCAGACCAG TGCTTAACAC AACTTGCCAG CACCACCCAC GGGACGAAGT ACCACCACGT AACCCAGATT AAAGCGGGTG ACAGTGGGAT CGTTCTGTTA GCACGCAGAC TCTCTGGGTG GCACAGCGGT AGTTGTAGTC AAATTTTTGT CGTGCGTGGG AATCATGAAG GCAAGTTATA TGAGGCACGG CGCAAGGTGA CTTTAACTAT GACACACAGG ATGATCCACT ACTCGGGCCC AGGCGATAAA TTCTGGGCAG GATTTAACTC CCAATTCCTC AGGATCAAAC CCAAGGAAAT ACCACACACT TGCACATCAA ACTTCAACGT CTTCGAGTGT GGGCAGGTCG CGGCTCTTAT GTGCCAAGCT CTGTATCCAT GTGGGAGAAT TACATGTCAA CAGTGTGCGT CCGAGTATCT GGAGCTGACG AAAGTTGAAC TCGGGGAAAA GCTCAGCGAT GGTTTGTATA GAACAAGTTC GCAAATTCGT GAAAACCACC AAGAGTTCGC CCATGTGGCA CACATACTCA ACGTAATAGC TGATCTTCTG AGCCTCAAGA ACAACAACAT GGAGGCGTTC ACAGAAGTCC ACAAACTCAT AGGTGAGCAA ACACAGTCAC CATTCACACA CCTCAATCGC TTGAACTCGA TACTGATCAA AGGCAGCGAT ATGAGCAGCA ATGAGCTGTA TGAATGTTCA GATTGCATTC GTGAGCTAGC GCGATTCCAG AAGAACAGGA CAGATAACAT CAAGAAACTG GACGTTAGCG TGTTTCGGAA TAAAGCATCC TCCAAGTCAT ACTTCAACCT GGACTTGATG TGTGACAACC AACTTGACAA GAACGGAAAC TTCGAATGGG GCCAGCGAGG CTATCATGCC AAACGGTTCT TATCGAATTA TTTTGAGGTT GTCAACACAC AGAATGCCTA CCGAGAGCAC ACATTGAGGA AGCATCCGAA TGGCACGCGA GAGCTCGCAA TTGGGAAATT TATAGTGTCA ACAAACTTTG AAGTGTTTCG CAAGAGCATG GAAGGGAAGC GCATACCACA AATGCCTGTT ACTGAGGCTT GCCTGAGTCA GCGTGGAGAG CGTTTCATTT GCCAGTGCTG CTGTGTAACA AATGAAGATG GCACTCCACT TGAGTCGACA TTCAAAATGC CAACGAAGAA CACACTCGTG CTTGGGAACA CGGGTGATGA GAAATTTGTC GACATGCCCA CCGACACGGA TGAGAAGATG TATATAGCTC GAGAGGGCTA CTGCTACATC AACATATTTT TCGCCATGCT AATAAACGTT CGTGAAAGTC AAGCAAAGGC ATTCACGAAG ATGGTGCGAG ACCGCCTCGT ACCCGAGCTT GGAACATGGC CAACCATGAT CGATGTGGCA ACAGCATGCC ACACATTGAC TGTCTTCTTC CCAGACACAC TGAGCGCAGA ACTCCCGCGA ATTCTCGTGG ACCACAACAC TAAGACGATG CATGTGATTG ACTCATACGG ATCTGTTAGC ACTGGCTACC ACCAGTTAAA GGCTAACACA GTGAGTCAGC TAGTCCTCTT TGCTAGTGAC ACGCTGAAGT CAGAAATGAA GCACTACCAG GTCGGCGGGA AGAAGTTCAC CGTCGAATAC GAAGCAGTTA AGCTACTAAT AAAGGCTATA TATAGGCCTA AGCTTATGTG GACACTGATG GAGGATGAGC CCTACCTGAT TTGTCTCGCA ATGTGCTCTC CAGGAGTGCT TATTGCTCTG TTCAACAGTG GATCCCTCGA AACCGCAATT AACTACTGGG TTGCGCGGCA CAAAGACACT GCACAAATTT TTGCGCTACT CACTGTACTC GCCACAAAAG TGTCAGTCGC TCACACACTC ACAGAGCAAC TGGCACTATT GAGCGATCAT GCGACAGATG TGCTCAGGAT CATGGATAGA ACGTTTGCCA CGCAGCACTC TGTTTCACTA GTGCATACGT TCTTGATGCA ACTGGAGGAG AAGCGACACA CGGATGTCTC ACTCGTGGGC TCAGGTTTCT CCAATTTGTG TGCAACAACG CATGAGCTTA TGGAAAAAAA TTATCTGGCG GAGTTGGATG CGTCCTGGCG AGATCTAAGT TTGTTGGAAA AGTGCTCACA AATGCGTTGG TCATTTCAAT CACCACAGCA GTTTTCAAAC GAATTGCACC CCAGCGCGTC AACCGATTTG AACGGTCGGT ACAACACATC TGTGCGTGCG CTTTCCACAA GATATATGAA TAACCTACGT AAGAGTGTAT GTACAAAGTA TCATAATATG AAAATACGAA CGCATCAGTT TATAGGTAGA CAAGTGTGTA ATTCAATAAT GGGACCGAGT GGGTTCTTCC CGGATTTAGC ACGATGCGTG CATATATTAG CGATATTTAG TATAATGTTA AATATTATTC GCACTATTAA CATATATACT AGTGAGTACA TACGCCTGAA GAACTGCGAA CTCTCGCAGA TTGAAGAGAA ACGCTGGAAT AAATTACTCC ATACATTTGA TATGATGGAG AAGATAGATG GACAGAAACC TACGCTAATT GAATTCACTA AGCACCTTAA ACAATGGGAT CCAGAGTTGT ACTCTGAGTT TCATAGCATA TTACAGGATG AGGAAGAGGA TACTGAGGAG GTGCAGTTTC AGGCTAAACC GGACGGGGAG AGAAACCTCG AACGAATTAT GGCTATAATT GCACTGACTA TGATGGTCTT TGACGCTGAT CGTAGTGATT GCGTGTATAA GGTGCTCAAC AAGTTGAAAG GTTTGCTGAA CACAGTGCAC CAAGAGCCGG TGAAATTTCA GAGTATCGAT GACATCCAAG ACCTTCTTGA AGAGCGTGAA ATGGTCATCG ACTTTGAGAT CTCAGCGGAC GACCACAACA TCAACAAACT CGCTGGTGCA ACATTCGAAC AGTGGTGGAG CAACCAGATG GAATGCAATA ATGTGCTGCC ACACTATAGA ACGGAAGGCT TCTTCATGGA GTTTACACGA GCGAACGCAG CACATGTAGC GAATGAAATA GCACACGGCC CACACAAGGA CTTGTTAATC CGTGGTGCTG TTGGATCTGG AAAGTCGACA GGGCTCCCTT TCTATTTGAG CAAGCGCGGA CGCGTTTTGA TGCTTGAGCC CACTAGGCCA TTGGCCAGTA ATGTGCACAA GCAACTGGCA GGGGATCCGT TCCTGGTCAG CGCAACGCTA AAGATGCGGG GAGAAACCAC ATTTGGCTCA GCTCCAATCA CAGTGATGAC AAGTGGCTAT GCGTTCCATT ACTACGCCAA CAATCCCAAC CAGCTACGCG ACTTTGAGTT CATCATCTTT GATGAGTGCC ATGTCAATGA CAGCTCAGCG ATGGCTTTCC GGAGCCTGCT CGCAGAGTAC ACGTACGACG GACGCATCAT CAAGGTGTCG GCAACACCAC CAGGGCGAGA GGTTGAGTTC ACCACGCAGC ATCCTGTCGA AATAATACCC ATCGAGCGGT TGACGTTTCA GCAGTTCGTT GCAGTGCAGG GGACTGGAGC GGTCGGTGAT GTGACCACGA AAGGGGACAA TATTTTAGTG TACGTCGCTA GCTACAGCGA AGTTGATAAT CTCAGCAAAG GGTTAGTGGA AAAGGGTCAC AAAGTCACGA AAGTGGACGG TAGGACCATG AAAGTCGGAG GTGTGGAGAT CATCACTAGC GGTAGCCAAG CGAAGAAACA CTTTGTTGTG GCCACGAATA TCATCGAGAA CGGTGTCACA TTGGATATCG ATGTTGTGGT GGACTTTGGG TTGAAAGTTG TGGCAGAGGT GGACATCGAC TCGCGTCTCA CGCGCTACAT CAAGAAGTCA ATATCATATG GAGAACTCAT ACAGAGGTTG GGGCGTGTCG GACGGAATAA ACCTGGTGTC GCTGTTCGAG TTGGCACCAC GGAGAAAGGA TTACAGGCAA TCCCCGTAAC GACGGCCACG GAGGCAGCAT TCCTGTGCTT CGCTTATGGT CTACCGGTAA TGACTAATAA TGTGTCTACA AACATACTGA CTAATTGTAC AGTTCTGCAA GCTCGAACGA TGATGCTCTT TGAGATCAAC CCGTTCTATA TGTGTCATTT CGTTCGATTT GATGGAACTA TGCACCCAGA GGTACATAGA ATACTAACAC CATATAAGCT ACGCGACTCG GAGATAATAC TAAATAAAGT CGCAATACCA AATAAATGTT TGATGCAATG GCCCACTGCG AAGGAATATG CCTATCAAGG ATTTAGAATG AATATACCTG ATACAGTGCG ACTACCTTTC CACTCAATGG ACATCCCTGA GCGGCTACAT GAGAGAATGT GGCAAATCGT TGAAACACAC AAGGGCGACG CTGGATTTGG TCGCATAACA ACAGCAAGCG CATGCAAGAT TGCGTACACA CTGAGGACTG ATGTTGCATC CATTCAACGC ACAATCCATA TATTGGATAA GTTGATCGAA AATGAGCTTA AGAAGCAAGA GTATTTCCGG AACATCACAA GTGCTTCGTG CTCCAGCTCC AGCTTCTCAC TCACGACGAT CACAAATGCA ATACGCGCAC GGCACATCAA AGATCACACT GTTGAAAACG TGAGCGTCCT CCAGGCGGCG AAGGCACAAA TCCTTGAGTT TAAGAACGTT ACATTCGACT TGGACCACGT GAATCGCATG ACTGAGTATG GTGCTTTGGA GTGTGTCCAA TTTCAGACAC TGGAGAGCAT GGCTCAACAC CTACAGCTAA AAGGTCATTG GAATAAAAGT CTATTGACCC ATGATGTTGT AATTTGTGGG GCTGTGTTAC TCGGTTGCGT CTTGATGGTT GGGTCCTATT TCAAGGAGCG ATGCTCTGGT GTCGTGAAAC GATACAATGA GAACGTGAAA TTCCAAGCAA AGAACAAACG ACAAAGACAG CGCTTGAGAT TCAGGGAGGC GCGTGACAAC AAGCACGCGT ACGAAGTTCA TGGTGACGAT GCCGACATCC AGACATATTT CGGATCAGCT TACACGAAGA AGGGAAAGAC TAAGGGTGTC ACGCGAGGGA TGGGAATCAA GACCAGGAAA TTTGTAAATA TGTATAATTT TGACCCAACC GAATATTCAT TTGCCAGGTA TGTCGACCCA CTCACAGGGT ACACACTAGA CGAACAATCT TTAACCGACA TAGCCCTGGT GCAGGACCAC TTTGGGCGGA TCAGACGGAA GCTGATGGAG GATGGTGAGC TCGAGAAGGA GAGTTTGGCT AAGAATGCAC GCTTGGAAGT GTACTTTGTC AAGAACTTGG CAAGTCAAAT CCTCAAAATT GACATGACGC CACACAACCC ATTGCGTGTG TGCGACCATA TTGAAACGGT GGCAGGGTTT CCTGAACGCG ATATGGAGCT ACGCCAGTCT GGGAAATCAG TCATGGTTAC AGCTGCAGAG TTGCCTAAGG AAAATCCCTA TCCTGAGGGT GAGATAGTTG AGTTTGAAAA CAAGTCCACA TTCCATGGGC TGCGGGATTA CAATCCCATA GCCACTTGTG TGTGTAGGCT CGAGCACAAT TCTGATGGAC ACACATCGAG TCTATATGGT ATTGGGTATG GGTCGTATAT AATAACTAAC CAACACTTAT TTATACGTAA TAACGGCACT ATAAACATTG AGTCGCACCA CGGAACGTAC CACATACGCA ACTCCACACA ACTACAACTT TACCCAATTG AGGGGAGAGA CATAGTGATC ATCCAGCTGC CAAAGGACTT CCCACCATTC GCACGACGCC TGAAGTTCCG ACATCCAACA ACAACTGACA AGGTTTGTTT GGTCGGCACC AACTTTCAAG AGAAAACGAC AACAAGCACA GTGTCTGAAG CTAGTTTGAT CACTCGAAAG GATGATTCAC ACTTCTTTAG GCACTGGATC AGCGCGAAGG ATGGGCAATG TGGCCTGCCC GCAGTATCAA CTAAGGATGG CTGCGTCTTA GGCTTACACA GTTTGACGAG CTTGGTCAAT GATAGTAATT TCTTCATCGC ATTCCCTGAC GATTTCGAGA AGAATTACTT AGAGCGGGCG AATGAATTGA ACTGGGTCAA GCACTGGAAG CTGAACGTCG ACAAGATCTG CTGGGGAGCA CTGTCTCTTG AGAAGGACAA ACCGAGCAAC ATGTTCAAAT TGAGCAAGGA CATTCAGCGC CTGGACATGG AACCTGTTGG ACTTCAAAGC AGGGAGGATA AGTGGTTATT CGACAGGTTA AATGGCAATC TAAAGGCTAT GGCACGTACT CGCAACCAAC TTGTCACAAA ACATGTGGTG AAGGGGAAGT GCCTACTTTT CGAGACTTAC CTGAATGTTA CTCCTAAGGC GAAAGAGTAC TTCACGCCAA TGATGGGTGC ATACCAAAAG AGCCGGCTAA ACAAAGAAGC ATACATTAAG GATCTGTTCA AATACTCAAG CCCTATAGTG GTCGGTGACG TTGACTGTGC AGCCTTTGAG GCAGCATGTG ATAGCGTGAC TCAGCTGTTC GAGGGTGCTG GATTTGGCAG GTGCAATTAT GTTACTGACG AGCAGGAGAT CTTTTCGGCG CTGAACATGA ACGCTGCTGT TGGGGCCATG TATAGTGGAA AGAAGCGTGA CTATTTCAAG GATTTCACAG ACCTGGACAA GGAAAGCATC CTTCGGGACA GCTGCCTACG CCTATACCAA GGCAAGATGG GAGTGTGGAA CGGCTCTTTG AAAGCGGAGT TGCGAGCAAA GGAGAAGGTG GACCTAAACA AAACGCGAAC CTTTACAGCG GCGCCCGTGG ATACACTACT TGGTGGGAAA ACGTGCGTGG ACGACTTTAA CAACAGGTTT TATTCTTTGA ACATTGCGTG TCCCTGGAGC GTTGGCATGA CAAAGTTTTA CAAAGGTTGG GATGAAATGC TGCGCAAATT ACCTGAAGGA TGGGTTTACT GCGATGCTGA TGGATCACAA TTCGACAGCT CGTTGTCACC CTACCTCATA AACGCAGTTT TGAATCTACG ACTACACTTT ATGGAGGAGT GGGACGTGGG AGCGCAAATG CTACAGAACC TGTATACTGA AATAATATAC ACACCAATAG CCACACCTGA TGGCACAATT ATAAAGAAAT TTAAAGGTAA TAATAGTGGG CAGCCATCAA CAGTTGTCGA CAATACCATT ATGGTCATAT TGGCCATACA TTATTCATAT AAATATCTAA AGATAACAAA ACCTCTGGAC GAATTCTGTA AGTACTTTGT TAATGGTGAT GACCTATTGC TGGCAGTGGC GCCTGAGTTC GAATACCTAT TGGACCACTT TGCGAACACT TTCCAGCAAT TAGGACTCAA CTATGACTTC TCGTCCAGAA CCAAAAATAG GGAAGAACTA TGGTTTATGT CGCACCGTGG GATCATGACG GATGGCTTGT ACATACCGAA ACTTGAACCG GAGCGCATTG TATCCATACT GGAATGGGAC AGAGCGGTGG AACCAGTCCA CAGGCTGGAG GCGATCTGCG CATCTATGAT TGAGGCGTGG GGATACCCGC AGTTGTTGCA TGAAATCAGA AAGTTCTACT ACTGGGTGCT CGAACAAGCC CCTTATTCTG AACTTGCACA ACTCGGTAAA GCTCCATACT TATCGGAGGC CGCTCTTCGT GCGCTGTACA CTGGTGAGGC AACGAGCCAG GACGAGCTCG AGCGTTACTT GGCAGCCGTA AACTTAGAAG GTGGATGTGG TGGCGCAGAG ATTGTGGCGT TCCAGGCAAA TGAGACACTC AATGCTGGAG CTTCCAGTTC CACACAAGCG AGTCGATCGA CTCGACCTGA GGCTTCAATT GATGTGGCGC CGCAACAGAG TTCTGAGGCT AGAGTGCGTG ATCGTGATGT CGATGCCGGC ACCGTGGGAA CATACCAAAT CCCACGACTG AAGGCACTAG CAACAAAGAT CAACGTACCC AAGGTCAAGG GGCGAATGAT AGTGAACACT GGGCACCTTG TGAATTACAA CCCAGACCAA ACAGATATTT CAAATACAAG GTCAACCCAG AAGCAGTTTG AGGCTTGGTA CAACGCAGTG AAAGACGAGT ATGGTCTCAA CGACGAGAGT ATGGCTCTCG CAATGAATGG TCTGATGGTT TGGTGCATAG AGAATGGCAC CTCACCAAAT GTAAATGGCG TGTGGCTCAT GATGGACGGA GATCAGCAAG TTGAATTTCC TTTACGTCCT ATACTTGAAC ACGCAAAACC GACGCTGCGC CAAATCATGG CGCATTTCTC AAACCTCGCT GAAGCTTATA TTGAGAAGCA AAATTTAGAG AAACCGTACA TGCCTAGGTA CGGCCTTCAG CGAAATCTCA CCGACTTCAA TCTAGCACGA TTTGCTTTTG ATTTCTATGA AGTTACTTCA CGCACGCCAG CACGCGCTAA AGAAGCACAC TTCCAAATGA AAACAGCCGC TTTACGCGGA AAACAATCGA AGCTATTTGG GCTAGATGGA AAGGTGAACA CCCAAGATGA GGACACGGAG AGGCATACAG CAGATGATGT TAATAAAAAC ATGCACTCCT TACTTGGAAT TTCTATGTAA ATCCTCGAAT AAACAGCACT AGTAACTTGC TAATATATCT ATCTCGTTTA TTCCGTAGTA TCCTATCTAT TAGCTCAACT CTTTGTGTTA TAGTGTGGTT TACCATGAAC GCACATTGTA GTTGAGAACC GAGCTCCTTG TTGGTGTCTA GTTGCAGAGA GGTTTCCTCG CGTCTTCTTA GCCACTAGTC TTGGAAGAAG GGCC 
Length9644
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Virus3538
3.16228 Virus2967
3.4641 Virus3757
4.69042 Ahg321223 Protein of unknown function (DUF1640)
4.89898 Virus3365
5.2915 Virus3042
5.91608 Virus3318
7.34847 Virus3601
8.94427 Virus0051
9.48683 Virus2909
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression