| Annotation |
|---|
| Description | Johnsongrass_mosaic_virus|plants|ssRNA |
| Sequence |
AAAATGAAAA GCTCCCAACA CAACACAACA GAACCTACGT CAATTGATTT TATCAATCGC AAAGCCTTAC AAAGATCTTC GCAGTCGTTC ATCAACAGAT TCACCGAACC ATTCTTGTTA GCTCTCGCAC AGAGATAAGC AGGAAACAAT GGCAGGTGAG TGGAACACAG TTGTCGGCAA GAGAAACCAG AGGAAGACTG AAGAACAGCG CATATTTGAT GCACAGAAGA GATTTTACGA AACGCACCAA GTATACGATG CACAAAGAGC ACTGCTACAC AACAGTCGTA TTCTGAAGCG CAACTTCGAG TTAACTAATG CAATTGAGAA ACCAAAGAAT GATCCAAAAC CAATTAAGAA GGTTTTCAAA CAAGTTTGGG TCGCGAAGGT GAAAGAAATA CTCAATGAGC CCAAACCAAT TGACATTAAA CCAGTTCAAG CAAGAGATGA AGTGGTTAAG GTTGACATTG GTAAATTTGC AAGAGTGTTA CTCGATCAAT GCAAGGCATA TAAAGTCCCA GTTGAGATAG TTGGAAGAAA GCGGAAAGTG GTCTCACGAA TTCAACCCTA CTTGAAGCAT GGTAAAACAT TCTTAAAGTT AGAAACAAAC CATGAACAAG GTAGGATCAC ACGACGAGAT CTCAGCATGC CTGATCCTGT AAAGAAGCTG GTCCTCAAGA TAGCAGACAA GTACGAAGAA CCAACTGACG AGGACCTAGA AACATTCTCA AAGGGTTCCA GTGGAATTAC ATTCAAATCA GAGACTGGTA TGCTTTTTGT CATCCGAGGC AGGGTGAATG GTGTTCTAGT AAATGCATTA GATCAATATG AAGAGGACGT TAAACAAATT TGTCATTACT CGTTTGATGC AGAGGCTCGA GCATTCTGGA AAGGTTTCAC AGAAAATCAC ACGGCCCAGA GGCGAGAAGC ACATGACCAC ACAAACCACG AACCTGTTAT GTCAGTGGAA GAGTGTGGCA GACGAGCAGC CATGCTTGAA AATGCATTTC ACCAAGGATT CAAAATCACG TGCAAACATT GCTTTCAAAC TTTTGATGAG CACAGTGATG AAGAGGTATG TGAGCGTATA CACAATGCAC TTCAAAGAAT TGAGGAACAA AACCGCATAT TCATTTCAAC AGATCAAGCA CTTAAAACTA GCTTACGTGT GCTCAAGGAT GTCACGGATG TAACTAGAGT GCACCATGCA GATTGCTTGG AAGTAGTCAA GACCTTGGAA CCTACATTAC CAACTCCAGC CAACAGAATT GTTGAGATAG CGAAATCGCT AATGAAAGTG CGAGTTAGCG ACGAGTTACA AATGGTATCT GTTGGGCAAA ACCTCCTGGA AATAGCCAAG TGGTTTTCCA AAAGGCACAA AGCAGGTCCG TCAGATGACT TGTCTACATA TAAAAACAAG GTAGCAGCAA GAGGCGTGGT TGGAAATGCC CTCATGTGCG ACAATCAATT AGACAAAAAC GGCGATTTCC TATGGGGTCA GAGGGCATAT CACGCGAAAA GATTCTTATC CAATTTCTAT GATATAGTTG ACCCATCAAA CGAATATGAT AAACACATAA TTCGAAGGAC TCCACGTAGT CAGCGACACT TAGCAATTGG GAAACTAATA GTCACAATGG ACTTGGAGAA AATGAGATCA AGACTAGTTG GTCTTCCATG TGAGCCCAGA AACATAGCAC AACACTGTGT TAGTAGATTG AATGGAAACA TAATATATCC ATGTAGTTGC GTTACGCAAG AAAGTGGGCG ACCATTGGTG AGCGAGCTCA TCATGCCAAC AAAGGAACAC ATTTCACTCG GGAACTTGGC CGATCCTCAT CTAGTTGACC TACCACAGTC AGACCCACCA CAGATGTACA TAGTCAAGGA TGGATATTGC TACTTGAATA TATTCTTAGC TATGCTGATT TACGTGAAAG AGGATGCTGC AAAAGATTTC ACTAAATTCA TACGAGATCG CATACAACCA ATGCTAAAAG AGTGGCCCAC TCTCAAAGAT GTTGCAACTG CCTGTTACCT GACAACAATA TTCTATCCAG AAACATTACA AGCGGAAATA CCAAAAATTT TAGTGGATCA TGACACGAAA ACTATGCACG TAGTTGACAC TTTTGGCTCA CTTACAACTG GATATCACAT TTTAAAAGCT AGTACTGTAG CACAGTTGAT ACGGTTTTCG TATAATGATC TAGTTAGTGA AATGAAAGAA TACATAGTTG GTGGTGATTT AACGCATAAA ACAATCGTGA AATTAATTGA GTGTTTAATT AAAGGAATAT TCAACAAGGC ATATTTACAA CAAATCATAG TCGATGAACC TTTCTTATTA CTACTAGCTA TTGAGTCACC ATGTGTTTTG ATCAACATGT ACAACAATGG CAACTTTGAA ACTGCTATGA AGTACTATTC AACTAGGAAC ATGCCATTGA CAAATCTGTT TGCTGCAATG GAAAGTTTCG CCAAGAGGGT GAGTAAAGCA GATATATTTG CTGAACAGAT ACACATAATG GAACAAGCTG CATACGATAT TCACGCCCGC ATGGCTGGGA CTTATGTGAA TGATCCGTTA GCTAGTTATG TCAAACACCA TCTGATAGTT ATGATGAATA GGGCTGACAT GAATGCTCAG TTGAAGGCGG AAGGGCACAC GATATTCGAC AATAGAACAT ATGAGATAAT TGAGAAAAAT TACGCAAACG ATATACAAGC ATCATGGCAA GAGCTAAGCT GGTCGGAAAA ATTACGCTTG GTCTCACAGT TGTACTTTAC AAAGAAGCCA CGGCGTCAGT GTATAAAACC GAAAGAAGGC ACAGATTTAG GCGGAATTTA CAATATATCT CCAACGCTGC TGGTTTCAGG ATTTCACGAG AAACTTCACG CGAAAGCCAG CTCTACTTCT CAGAAACTCC AATCCATGTA CAATTCAGTA AAGCACAAAT TTCGAGGAGG CATCCTTAAA ACAGCATATA GATGCTTACC AGACACAATA AAGCTGATGC ATGTTGCCAT TATTATGAGT TGCGTTTCAT CAATACTGTT ATCAGTCTGT GCAGCTGGAA CCGAATACAA GAAGTACAAA AGAGAAGCTC TACGAGAACA GATTGAGAGG GAAGAACAAA TGGTTGAAGC ACTACATGCA CAATTCATGC TTGACAATCG ATTTTCAGGA ACGGAGAGAG AATTCATCGC ACGTATCGAG AAGAATTTCC CACATTTAAC GCCACGAGCA CTAGCAATGG TGAAAACAGA GGTCGAACAC GAAAGAAAGG GCTACGCAGA ACTCAAATTG GAGCAAGTCA TCGCATTTGC AACTCTGCTA ACCATGCTCT ACGACGCTGA CAGGAGTGAT GCGGTCTACA AGATACTTCA GAAGATAAAA GCTTGCACAA ACATTTGCAC ACAAGAAGTC AAACATGAAG GATCACAAAT CGATGACGTA CAGGAATTGG AGAACCTCAA GCGTCTGACT GTTGACTTTA ACATCGAGCA AGAGATACCA CCATCAATTG CAGTGCATGA CACGACGTTC GAGAAATGGT GGACTACGCA AATCACACAG AGCAGAACAA CAACACATTA TAGAAACAAG GGCGAATTCA TTGAATTCTC ACGAAGCAAT GCCATAGTTG TCTGCAATAG AATTGCTCAT GGATCAGACT CCAAACACTT TCTGGTTAGA GGCAACGTAG GATCTGGGAA ATCAACAGCT ATACCGAGGT ACCTCAGCGA TAAAGGCAAA GTGTTGGTGC TTGAACCAAC AAGGCCGCTT ACAGAGAATG TATGCCAACA ATTACAGAAT GAACCTTGGT GCTTAGATCC CACAATGCAA ATGCGAGGTA AGAGCATATT TGGATCAACG CCAATAACAA TAATGACAAC GGGATTCGCA TTGCACCTGT TTGCCAATAA TGTTGAGAGA CTGTCAGAGT TTAAATTCAT CATTTTTGAT GAGTGCCACG TTGTTGATTC AAATGCAATG GCTTTCTCAT GTCTCTTGGA GGAGTATAAA TACAACGGGA AGATCATATC AGTATCAGCC ACACCGCCAG GCGGATCAGA ATTCCAGACA GAGAAAGAAG TTGATCTTAG AGTGTTTGAG GATGTTTCAT TCGATACTTT TGTTATGGAA CAAGGAACAG GCTCAAAATT AGATGCAGTC TCAGTTTGTG ATTCAATTCT GGTATATGTT GCGAGCTACA ATGAAGTTGA CCAGATGAGT CGACTTTTAA ATGAAAAAGG TTACACAGTA ACCAAGGTTG ATGGGAGAAC CATGAATGGA GGTAACAAAA CAGGTAGCGG TTTGAACAAA CACATACACG TTAGCCTGAA TGAAACGTTG CAAGCACAGA TCAAACAACA TGGGAAGAAT TTCATAGTAG CCACCAATAT AATTGAAAAT GGTGTCACGC TCAATGTGGA TGGAGTTGTC GATTTTGGGA CAAAGGTCGT TGCAGACTTG GACGTTGACA ACCGATCGAT CATATATCAG AAGATCCCAA TCTCATATGG TGAGCGAGTG CAAAGATTAG GAAGAGTTGG ACGTTTCAAG AAAGGATATG CTTTTCGAAT TGGAACAACA CAGAAGGGCA TAGTTGATAT CCCAGCTATG ACAGCCACAG AGGCAGCATT CCTTTGTTTC GCATATGGGC TACCTGTGAT TACACACAAT GTATCTACAA CACATCTTTC TCATGTCACG AGCGCACAGG CAAGGACTAT GCTCCAGTTC GAGCTACCAA TCTTTATGAT GAGCGAACTA GTTAAGTATG ATGGACATAT GCACCCAGCG ATACACGAAA TCCTGAAGCA ATTCAAGCTG AGAGATTCCT CAATTAGCCT GCGAGACACG GCATTACCAC AAAATGCAAG TGATTTGTGG TTAAGTGTGG GTGCGTACAA GAAGCTTGGT TACAGGATCG ATTTACCGGA TGATTGCAAA ATACCATATT ACGTGAACGG TGTGAGTGCC AAGATGTACG AACAAATCTG GAATGCAGTA AAGGACTTCA GACAGACATG CTGCATGAGG CGAATGACGA GTTCATGTGC AGGGGAAATT GCATATACAC TCCAAACAGA TGTCAATGCA ATTCCTAGAA CACTTGCAAT AATAGATGGG CTGATAAAAG AGGAACAGAT TAAGCATAGT CATTTCCAAA GCATATCAGC GAACTCGACG TCATCATACA ACTTTTCATT GAACGGCATA ATGGATATGT TGCGCAGTAG ATACATGAAG GACCACAGCG TGGATAACAT CGCCAAACTC GAGATGGTCA AGAATCAAAT CATAGAATTC TCGAATGCCT CTATTAATTA TAGAGATGTT GATTTCATAA AACACTTTGG AGCATTGCAA ACTGTTATCC ATGAAAATAA AGAAAATGTG TGCAAGGAAC TTGACCTCAA AGGAATATGG AATGAGAAAT TAATGTGTAG AGACGGAATC ATTGCAGCAG GAGTGGCAAT AGGAGGCGCA TTGATCGGAT GGGAATGTTT CAAGTACTAC TTCATGACGG AAGTGGAACA TGAAGGGAAA TCCAAGCGCA CAAAACAGAA ACTGAAATTC CGAGATGCAC GAGACAAGAA AGTTGGGCGA GAGGTGTATG GAGACGATGC AACAATTGAA TACTATTTTG GAGAGGCCTA CACCAAGAAA CCAAAGAAAG GTAACAAAAC ACATGGCATG GGCTTCAAAA CTAGGCGTTT CACACATATA TATGGTATCG ACCCAACTGA ATACGACATG ATCCGTTTTG TAGACCCTCT GACAGGCACA ACGCTCGACG AGTCCACTCA AGCTGATATG GCACTGGTTA AGGAACACTT TGCGAATGTG CGTGAGTCGT ATGTGGAAAA CGACATACTT GAGCGTCACA GTTTGTACTC GAATCCAGGA GTTCATGCAT ACTTCATCAA AAACAATGCA AGCAACGCTT TGAAAGTGGA TCTGACACTG CACAACCCAC TAGCATTGTG CAGAACAAAC GCGATCGCAG GTTTCCCTGA ATATGAAGGA GAACTACGAC AAACAGGTCC AAGTGTAGTA ATTCCAAAGG AGGAAGTACC AGCACAAAAT GAACCAGAAG TAGAACATGA AGGCACATCA GCTATACATG GGGTTGCCAA CTACAATCCA ATCTCAGACA ATATCTGCTT ATTGAAAAAT GATTCAGATG GGAAGAACAT TGAATTATAT GGAATTGGAT TTGGCCCTTA CGTAATTGCA CCGGGCCACT TATTCGAAAG CAATAATGGA TCATTACACA TACGGTCAAC CAGAGGATTA TACAAAATAC CAAACACACA GGCTCTCAAG ATCTCAGCAA TAGAGGGGCG CGACATCATA CTGATACGTC TGCCAAAAGA TCATCCCCCA TTTACACGCT CTATAAAGTT CAGTGAACCA GACAAATACG ACAAGGTTAT AATGCTCAGA ATGAACTTCC AACAGAACAA AAGCATAGTT GAATTCTCTG AGAGTTCCAT CATAGCACAG CAAAGTGCCA GTTTCTGGAA ACACTGGATT TCAACCAAGG CAGGATATTG TGGACTTCCG CTTGTCAACA CACGAACAAA AGAAGATGTG GGCATTCACA GTCTGAAGGC AACAAACAAC AGCGTGAACT ACTTCACTCC AGTAAATGCT GATCTTATAG GGAAGTTAGC GCTTGATATA GAGACAATCC AGTGGACAAA AGGATGGAAG CACAATATGC ACTTACTAGC ATGGGATGGT TTGCACTTGA GGAATTCAAA GCCCAGCCAA GCTTTCAACA CAGCAAAAGA GATTGAGGTT ATCAATGAAC GAATCTCCAA CGAGAGTGCT GATACATGGC TATCAAGACA ATTTAATGAA AATCTAAACG TCGTCGGCGA ACTGCCCGGA AACTTAGTTA CAAAACATGT GGTGAAAGGA AAGTGCCAGC TATTTCAATT ATTCATGAGT GTCGACGAAC AAGCAAAGAA ATTCTTTGAA CCACTGTGCG GTCATTATGG CAAGAGCTTA CTAAACAGGA ACGCATTCAT AAAGGACTTC ACAAAATATG ACAAGCCAAT AATAGTTGGA ACCGTGAAGC CAAATGAATT TGAGATGGCT ACCAAGGATG TGATTAACAT GCTACACAAT CTTGGCATGA AAGATTGTAA TTATGTAACG ATTGCGGATG AGATATATGG TTCAATGAAT ATGAAGGCAT CAGTCGGTGC ACTCTACAAT GGTAAGAAAC GAGAGTATTT CGCCAACTTC ACTGATGAGC AAAAGGAGAA ACTCATGGAG GAATCGTGCA AACGACTCTA TTGTGGCAAA CTCGGTGTTT GGAATGGTTC GCTTAAAGCA GAGATTCGTC CAATGGAGAA AATACTTGCA AACAAGACAC GAACATTCAC AGCAGCACCC CTCGAGACAC TGCTAGGTGG GAAAGTTTGC GTTGATGACT TCAACAATCA GTTCTACCAG AATCATCTCA AAGGACCCTG GACAGTAGGA ATCTCAAAAT TCTACAAGGG TTGGGATTCC TTAATGAGGA GATTACCGGA GAACTGGGTG TATTGCGATG CAGATGGATC TCAGTTCGAT AGTTCACTGA CACCATATCT AATAAATGCA GTTCTGCAAA TCCGATTGGC TTGCATGGAA AAGTGGGACA TTGGTGAAAA GATGCTGTCA AATCTGTACA CAGAAATAGT CTATACACCA ATAGCAACAC CAGATGGAAA GGTCGTCAAG AAATTCAAAG GAAACAATAG TGGACAGCCA TCAACAGTCG TGGACAACAC ACTCATGCTC ATCCTGGCAT TTACATACGC ATTGAGAGTC AATAATATTG AAAACTTTGA GCAAGATGAC ATTATCAAGA TGTTTGGCAA TGGTGACGAT TTGCTGATTG CAGTGAGACC AGACTTTGAA TACCTACTCG ATACATTTAA AGGACACTTC GCTGACCTCG GTTTGAATTT TGATTTCTCC AACCGAACAA GGAATAGAGA AGATCTATGG TTTATGTCGC ATCGAGGCAT GTTGAAGGAT GGAGTTTACA TACCGAAAGT AGAACCAGAG AGGGTTGTCG CCATTTTGGA ATGGGATAGA AGCATTGAGC CAGAACACCG TCTATCAGCA ATATGTGCAG CGATCATCGA ATCATGGGGC TACGAGGAAT TAACATATCA AATCCGACGA TTCTACCAAT GGGTCCTCGA ACAAGAGCCA TACAAGGAAC TAGCACTACA AGGCAAAGCT CCATACTTGT CAGAGACAGC TCTACGGAAA TTATATCTTG ATGAATCTTG CGATCAAAGT GAACTACTAC GTTATTATGA AGAGATGTAT AAGAACGCAA TGATGAGTGA AGATGTGGTG GATGTAGAAC ATCAGTCAGG CAATGAGGAT GCTGGGAAAC AGAAGAGTGC AACACCCGCT GCAAATCAAA CAGCAAGTGG GGATGGTAAA CCAGTACAAA CGACAGCGAC AGCAGATAAC AAGCCGTCTT CAGATAACAC GTCAAACGCT CAAGGAACTT CACAAACCAA AGGAGGTGGA GAATCGGGTG GAACGAATGC TACAGCAACA AAGAAGGATA AGGATGTTGA CGTTGGATCA ACTGGAACTT TTGTTATCCC GAAATTAAAG AAGGTTTCAC CAAAGATGCG TCTACCCATG GTGAGCAACA AAGCCATACT CAATTTGGAC CATCTAATCC AATACAAACC AGATCAGAGA GACATTTCAA ATGCACGAGC TACACACACA CAATTCCAGT TCTGGTACAA CAGAGTCAAG AAAGAGTATG ATGTTGATGA TGAGCAAATG AGAATTTTGA TGAATGGGTT GATGGTTTGG TGTATAGAGA ATGGCACATC CCCTGATATA AATGGTTATT GGACCATGGT GGATGGGAAC AATCAATCAG AGTTTCCACT AAAACCAATA GTGGAAAACG CAAAACCAAC ATTACGACAG TGCATGATGC ATTTTAGTGA TGCCGCAGAA GCATACATTG AAATGAGAAA TTTGGATGAG CCGTACATGC CAAGATACGG TCTCCTTAGG AATCTAAATG ACAAGAGCCT CGCTCGATAC GCATTTGATT TCTATGAGAT CAATTCGCGC ACACCAAATA GGGCGAGAGA GGCACATGCA CAAATGAAGG CAGCAGCAAT TAGAGGGTCC ACGAACCACA TGTTTGGACT CGACGGGAAT GTTGGAGAGA GCTCTGAGAA CACAGAGCGG CACACAGCTG CAGATGTCTC ACGGAATGTT CATTCGTACC GTGGGGCCAA AATCTAAGGA GGAGGAACAA CCGTCTATCT GACGTTAAAG GATGACTGGC CAAGTCTGAA AATTGGCGAG ATACCAGTTC CGAATAGTCC GTACAGAACT AGAGGTGAAC AGAGAGCACT ATAAACGTTT AGTAGGGATC GAGGGATGAC ACGTAGGACC TCAATGACCA TGCTTAGCGC TAGCATTGTG TGAAGCTCTA ACACTCAGGT GTTATCTTCC GGGCTGTGGT AATCTCGTAC CCCGAAGTAC CTATGGGCCC TCAGCACCAG ACAGTACTGG GACTATGGAT CTTTTCTTGG CAATCACTAG TATTATAAAT CGTTCTGCAA CGGCACGAGT GGTGTTTTAC ACCTGGGTGG GATTCTAATG CTGTTATACA GTTATGGATA ACGGCCCGTG TTGTTCGTAT TTACTAGTTG CATCAAACCA TCTGAGCCTC AGAGTGAGCT TCTCACCACG TAGTCTCTTA TGGCGAGAT |
| Length | 9779 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|