Detail



ID : Virus3909

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionYam_mild_mosaic_virus|plants|ssRNA
Sequence
AAAAATATTA AAACTAAACT AAACAAGACA TACAAAGATT GCGAACTTCT ACTTCTACTC ACTTTCAGTC ACCTCGACAG TCAGCTTTAA CTTGTAGAAA CAACCAGCAA GCAGTTCTAA AGACCAATAT TTAAGGAGCA ATGGCAGCAG TAGCAATGTC AACAACACTT CCCAAGGTCA TTTTTCCAAT TGAAGTTGAG AGCATCGGGA AGTACGGAGG AGTAAACTTT ATATTTGGAA GTTTTACTAC TGAGGAAACT TCTGCGAAGA TCACTAAACC CACTGCACAT GTAGCAAGAG TTATGAAGTA TGAGAAGGAC CGAGCATTTT CTAAAGCCCA ACTTGAAGCT TATGAAGAGG TTCAAAACAA ATTTGAAACA GAATGTGACA CACTTGGCTT CAAGCCACAT GTAAGTGAAA TGTCACGCCT TGTTAAGGGG AAAAACGGAA CGAAGTACCT GAAGGAATAT TCAGCACGGT TTAAAAAGGA ATGTGCGATT CGTGAGAAGA ATCTGCGTGA AGAAATTGAT TGGTTTAAAA ATCACGAACC ATTCCTTGTA GACAAAATTA AGTTCGAAAG TGATGACAGA GAGGCACACA TAGAGGCTGG AGAAACAAAG AAAGTCTTCT TCACTCGAAG TAAAAGAGTG CGACATGGAA TTAAACGCAC TCATCTTTCC CAAGAACAAG TGCAATCACT GATATCATCA GTGATTAAAA TAACTCCAAT GAACTGTGTT ATTGAACTTA AGCACAAAGG GGCGCCATCA GTACTTACTA AACAATATTT TAAAGGAAGG CGCATTTTGA AAGTCCAAAC ACAACATGAG AAAGGAGAAC ATAAGGTGTT TGATTACGTT GAAAACACAC GAGCAATAGC ATCACTTCAA ACGTTTCCGG ACACTTTCTG GCGTGGTAAA CCACTTCATG AGCGACAGAT CACACGAGGC TGTAGTGGCT TTATAATCAG TAGAGCTTTC TTAAATGGAT ACTACTATTG TACAGGCACA CACATGATAG TGCGAGGGCG CCATAAAAAT CTGTTATGTG ATTCTGCAAG TTATCTACCA GCTTCATACT TAAACGAAAT CACCCATTAT TCAGTTGCTG AGACATTTTG GAAAGGTTTC GATGAAGGTT TTCGAACTAA TCGGCACATA CCACAAATTC ATGAAGGAAA GAATACATTA CCGGTTGTTG AAGTTGGTAA AGTTGCAGGT ATCGTTTGTC AATCACTGTA CCCCTGTCGT AGGATCACAT GTACAGAGTG CGCAGCAAAA CATCTGCAAG CTAGTGAAGT TGAAGCACGG AACGAATTAA CACAAACGCT TAGCATCGGT GCCAGGAAAA TTCGAGAAGA GCATCCTGAC TTTGAACATG TTGCAAACTC ATTAAAGAAA ATAGAACACC TTATATCTCT GAGAAATGAC AACAGAGAAG CGAGCGGAAA AATCCAGTTC TTAATTGGAG AGAGGACTGA AGCTCCGTTT ACACACATCT TAAGTATCAA TGAGTGTTTA TTGAGAGGCA CAAAGAACAC AAGCACAGAC TTCTCACGTG CAACTGATCA CCTTCTCGAA TTAGCCCGTT GGATGCGTAA TCGAACAGAA AATATCAGGA AAGGTTCCAT TGAAAACTTC AGGAATAAAA TCTCTGGTAA AGCACACATC AACCCTTCAT TAATGTGCGA CAATCAACTA GATTCAAATG GAAATTTCAA ATGGGGAAGA AGGGGTTATC ACGCCAAACG ATTCTTTTCA AATTACTTTG ATCTGATTGA ACCAGAGCAC GGCTATGAAA AGTTCAAAGA ACGGAAACAC CCACATGGAA TCAGAAAGTT GGCAATTGGA AATTTGATTT TATCAACAAG TTTCGATGTG CTACGCACTC AACTTGAAGG TGAAAGCATT GAACGACTTC CAGTCACAAT TCAATGTGTT AGCAAGCGAC ATGAATCATT TGTATACCCT TGCTGTTGTG TGACTTATGA TGATGGAACT CCAGTGTATT CAACGGTCAA AACACCAACG CGAAACCATC TAGTAATTGG AACAACAGGA GACTCGAAAT ATCTTGACTT GCCAACAGAA ATAAGTGAGA AGTTGTACAT AGCAAAGGAA GGTTATTGTT ATATAAACAT ATTTCTTGCT ATGTTAGTTG AAGTTGATGA AGACGAAGCC AAAGATTACA CGAAATGGGT GCGTGATGTT GTAGCAACTC AGTTGGGCCA ATGGCCAACA ATGTCAGATA TAGCACTAGC ATGTTACCAA TTATCTGTTT TGTTCCCTTC GACACGATGT GCAGAGCTAC CACGCATACT TGTTGATCAT GCGACGAAAA CGATGCATGT CATTGATTCT TATGGGTCTT TGACAACTGG ATATCATATT CTGAAGGCAC AAACAGTTAG CCAGTTAATC GATTTTGCGC ATGATACGCT AGAGTCTGAG ATGAAACATT ACAGAGTAGG GGGAATAATG AACGCTACGA CAGTCAATGC GGAAACAATC AAGCTACTCA TTAAAGCAGT GTATCGGCCA AAAATTTTAA AAGAAATCAT TGAAAATGAA CCATACATAC TCACTTTGTG CATTGTTTCG CCAGCTATAA TGCGTGAGAT GTATCGCAAC GGAGCATTTA AACTTGCGCT GTTATCTCAA GTAAAATGTG ACATGAATAT TAAATTGTTA TCATCATTAT TGGAGAGTCT TTCTTTGAAA GTCACACGAG CCCAGCAATA TATTGAGCAA ATGGCCATAA TCAATAAGGA TGTGCATGTT ATTAGAGATG TGCTAAGCAA TGGAAGTATG TTAAATCACT CTAGAAGCCA AGCTTTGAGA TATGTTGAGA CAATTATAGC CATGCAACAG ATGAATCAGA ATTTGCTCCG TGATGGATAT TACACAACTC AATCGATCCA GAATTCACTA ACTGAAAAAA TTTATGTAGA GGAATTGAAG GCTTCATGGC GAGAACTTAC ATTGTCGGAA AAATTATTGT CAACTTGTCG GTCCTTGCAA GTGTGCGAAC GATTTGGAAG AAAGTGCAGA GAAGAAAGAC AAGAAACCTT ACGCAATGTC TCGAAATCTG TCACGCAATA CTTGTGCGGA GGCCTTACAA AGATGAAGAC TGGTGTTAAA GTCTCAACGG AGAAATGCAC ATACAAAGTT GTTAGCATGT CATTGAGAAC AGTTGGGGGT GCGTTTAACA TTCTAAACTA CGTCACACCT GAATTTCTCC GAACCGCAAG AGTTGTCGCA ATATTGAGTC TTTTTCTCTC AGTGTTCAGC AAACTTCAGC GTATTGTAAA CGAGCAATTA CATCAACGAG CACTTCTTAG AGATGTTCAG TTAGCAACTA ATTGGAAGAA AATTGAGACA CACTATGAGA CGCTTACAAA GAAGTTGCAA AACACACCGA CAATTGATGA ATTTGCACAA TATCTGAAGG AATCGAACGC AGAACTTTAC AAGGAATTTG TGGAAGTTTA TGAGCAACTC CCAGTTGAAC ACCAAGCCAA AAGAGAGAGT GAGCAACGTC TGGAACAAAT TATTGCATTC ATAGCTTTGG TAATGATGGT ATTTGATAAT GAACGAAGCG ACTGCGTCTA CAAAGTGTTA AACAAATTAA AGAATTTAAT GAACACAGCA GAACCAGTAG CACATCAAAG CTTGGATGAT ATCATACCAA TTTTTGAGAA GGAGCAATTA ATTGATTTTG AGTTGGACAC ACATGACTCA ATATCATATG CATATAAATC ATCAACATTC TCAAAATGGT GGGATAATCA GTTACAAATG AATCATGTGA TTCCACATTA TCGCAATGAA GGTCATTTTA TGGGATTCAC TAGGAGTGGT GCTGCCGGAA CCGCATCAGA AATTGCATGT TCAGATCACA AAGACATATT GTTGCGCGGT GCAGTTGGAT CGGGTAAATC AACAAGCTTA CCATTTTTAT TATCAAAACA TGGTCACGTA TTACTTGTCG AACCAACACG GCCATTGGTT GAGAATGTTT ACACGCAGTT AAGAGGCGCT CCATTTCACG CAAGCCCTAC TATGATGATG AGACACGCAA CATCATTTGG CTCACCACCG GTAACAATCA TGACGAGTGG GTTTGTAATT CATTATCTGG CTAATAACAG AAGCAAGATC AGTTCGTATG GTTACGTTAT CTTTGACGAA TGCCATGTTG AGGATGCAAA CGCGATGGCA TTAAGGTGCT TACTAGACTC TGTCGCATTT GACGGGAAAG TAATCAAAGT CTCAGCAACT CCACCTGGCA GAGAAGTTGA ATTCACAACG CAGTATCCAG TCGAATTACG CACAGAGGAT AAACTCTCAT TTGAACAATT TGTGCAAAAT CTTGGTAGTT GTTCAAATTC TGATATAACA ACGAAAGGAG ACAACATATT GGTTTACGTG GCAAGTTACA ATGACGTAGA CACACTTGCA CGAATGTTAG TGGACAAGCA TTATCTTGTG ACAAAAATTG ATGGGAGAAC GATGAAAAAT GGACTCACTG GAATACAAAC ACATGGAACT GCCAAGAGAA AACATTTTAT TGTGGCAACA AACATTATTG AAAATGGAGT TACGCTTGAT ATAGAATGCG TTGTGGATTT CGGTGTGAAA GTAGTCCCAG AGCTAGAAAT TGACCAAAGG AGAGTCATAT ATAAGAAAGT GCCGGTTAGC TATGGAGAGC GAATTCAGAG ACTTGGAAGA GTTGGAAGGC ATAAGGCTGG AACTGCACTG CGGATAGGTC AAACAATAAG GGAAGTGATT CCTTTAAACA CAATTGTTGC AACAGAGGCA GCATTTCTGA GTTTCGTCTA TGGCTTGCCA GTTATGACAG CCCAAGTCTC AACAGCGATA TTGGGTCACT GTACAGTGCA ACAAGCTAGG ACAATGAAAC AATTCGAGTT ACCCACACAT TTTATGGTCG ACTTAGTGTG TTATGATGGA ACCATGCATC CTTTGATACA CAATGTGCTG AAACAATATA AATTGCGGGA GAGCGAAATA ACTCTTAATA AGCGTGCAAT TCCACATTCA GTAGTTACAA GTTGGCACAA AGTGAGGGAT TATGACAATG ATGCCCAACT TGTAAATATG GCACCAAATG ATAAAATACC ATTTCTTTGC AAGGACATTC CTGGTGCTGC TTATGAGAAG ATTTGGAAAG TAGTGGTTGA GCATAAAAGC GACGCTGGTT TCAAGAATTT GACATCAGTG AATGCAGCAA AAATTGCATA CAAGCTGAAG ACAGATCCGC AATCAATACC ACGCACAATT CGTGTTATAG ATGAACTCAT AAAGATGGAG ATGGAGAAGA AAGCACATCT TGACACAGTC TCAAGCTTCA CATGCTCATC ATCAAACATG TCGTTGCACT CGATTGGACT TCTAATTCAG AGTCGATATG TGCATGACCA CACAGCAGCC AATATTAGCA CGCTACAGGC AGCAAAAGCG CAGCTAAAAA GTTTTCCTGT GAGCACTTTC TTTGAAGGAG TTCAAAACGA TTTCACTGAT CGAGTTTTCG TGGATGCTAT TGAGCACAAT GGAGCATTAG AAACCGTGTT ACATCAAAGT CAGGACGATA TTCTTCGAAC TCTTGATATC AGAGGTAAAT GGAAAGGCTC CGTCTTAGCG CGAGACATAC TTATCACAGC TGGAGTAGCA GCAGGAGCTA CATGGATGCT GTATGAATAT TTCACGACGA AGCTAGAGAG TGTGACACAT CAAGGAAAGA ACAAGCGGCA AAACCAGAAA CTGCGTTTTC GAGAAGCAGC TGATAGGAAA ATTGGACATG TCGTTTTCGA TGACGATTCT GGAACAATTG AACACTACTT TGGCACTGCA TATGCAAAGA AGGGGAAATC AAAAGGAAAA ACTGTTGGAA TGGGCAAGAA AACGCGACGG TTTGTGAATA TGTATGGATT TGACCCAGCA GAGTATCAAT TGATTCGATT CATTGACCCA TTGACTGGTG AAATTCTAGA TGAGAGCCCA CATGTTGATA TAATGTTAGT GAAGGATCAT TTTGACACGA TACGCATGGA GAAAATAGCG GACGATGAGA TTGAACCACA AAAAGTGTAC AAAAACTCTG GTATCCAGGC ATATTTGATT AAGGACAAGG TTTCACCAGT ATTAAAGATC GATCTTACTG AACATTTACC ATTGGCTGTT TGCAATAACT TTGAAACAAT AGCAGGATTC CCAGAGAGAG AAAGGGAACT ACGCCAAACA GGACAAGCAG TAAAGGTTTC ATACACTGAC GTACCGCAGA AATCAACTGT TATTCATGAA GGTGATTCAC TAGTGAAAGG GTTATTTGAT CATAATAACA TTTCAAAAGC AGTTTGTAAA ATAACCAACG CATCTGAAGG TTTTAGCACA ACGTTGTATG GTATTGGCTT TGGTGCTTTG ATCATAGCGA ACAGACATCT TTTCAAAAGA ACAGGTGGGG AACTATTCGT ACGCACCACA CATGGCGAAT TTACTTGTCC AGATGTTGGA AAACTGAAGA TACACCCAAT TGAAAACAGG GATATGGTCA TAATTCAAAT GCCAAAAGAT TTCCCACCAT TTGCAACAAA GCTCGAATTT AGAGCACCAC GTGCGAGTGA CAAAGTGAAG ATCGTTGGAA CAAACTTCCA AGAGAAGTAC ATCAGCAGTC TTGTATCAGG AGTGAGCGCA ATTTATCCGG TCGCCAATTC TGATTTTTGG AAGCATTGGA TCAAAACAGA TTTTGGGCAC TGTGGATTGC CCGTTGTTAG TGAAATTGAT GGTTTCATAG TTGGGATTCA TAGTTTGGCA AGCACCCAAC AGAATCACAA TTATTTCACG GGGATGATCG AGCACATGAA TGATCTACTT ACGACAGCAG AACAGCTTGA ATACACAAAA TTGTGGAAAT ACAACCCGCG TGAAATCTCT TGGGGGACAC TAGATCTGCA AAACAGCACA CCATCAGAAC CATTTGTGCT TAGTAAATTG CTGATGGATT TGGAACAAAC ACCGGTCGTC GAACAGAGTT TGCAAACATG GATGTACTCA TCACTCGAAG CAAATTTGAA GGCAGTTGGA CGAAGCCAAG CACAGCTTGT AACAAAACAC GTGGTTAAGG GCGAATGTGT TCTCTTTCAA CAGTATCTTG CAACCCACCC TGAAGCACAA ACTTTCTTCA AACCATTCAT GGGACATTAC GGAAAGAGTC GTCTTAATAA AGAAGCATAT ATTAAAGACA TCAAGAAATA CGCACAACCT ATCACCATTG GTATGGTTGA TACAAGTGTT TTTGAGTGTG CTGTGATGAA TGTTAAGACG ATGCTTTCAA ACCTCGATTT TGGGCAATTC GAATACATAA CAGATAGTGA GGTGATTTTT AAATCTCTGA ACATGAAGGC AGCAGTTGGG GCAATGTACT CTGGGAAGAA GAAAGAATAC TTTGAAGGAA AGACGGCAAG TGAATTGGAT GAGTTTCTAA AGGAAAGTTG CAAAAGACTT TATACCGGCA AGAAAGGGGT TTGGAACGGA TCAATAAAAG CTGAGTTGAG GCCAATTGAA AAAGTTCACG CGAATAAGAC AAGAACATTC ACTGCAGCCC CGATTGACAC GCTACTTGGT GCAAAAACTT GTGTTGATGA TTTCAACAAT TTCTTCTATA TGCAACATAC AAAAGGCCCA TGGAGTGTTG GAATGACGAA GTTTTCTCAA GGCTGGGATA AAATGTTGAG GAAGATACCT GATGGGTGGA TCATCTGTGA TGCGGATGGG AGTAGGTTCG ATAGCTCACT CACTCCCTAT TTGATCAATG CTGTTGCACA CATACGGCAG TATTTTAATG AAGATTGGGA CATAGGGGAT CAAATGCTAC GTAATTTGTA CACAGAAATT GTGTACACAC CAATCTTAAC AGCTGATGGA ACCATAGTGA AGAAGTACAG AGGAAACAAC AGTGGTCAAC CCTCCACAGT GGTCGACAAC ACTCTTATGG TTTTATTGGC CGTACAATAT GCGATGCTGA AGAATGGAAT CAATGATGTT GAGCAGAAGG AGTGTGTCTA TTTTGCAAAT GGGGATGATC TAGTGATAGC AATACCTCCA GAGCGAGAAC ATGTACTCAA CACAATGGCA GAATTCTTTG CAGAACTTGG ACTTTCATAT GATTTTGGCA ATAGGCATAA GCGCAAGGAG GATATCTGGT TTATGTCACA CAAGGCAATC ACGAGGGAAG GCATATTCAT CCCAAAGCTT GAAGAGGAGC GAATCGTCGC AATACTTGAA TGGAGCAGAA CAGAGAATTA TGAACATAGG CTCGAAGCCA TTTGCGCAGC AATGATTGAA GCATGGGGTT ATGATGAGCT ATTAAAGCAA ATACGTTTGT TTTATAGCTG GGTTTTGGAG CAAGAACCAT ACAAGACTCT GGCGTCTGAG GGACGTGCAC CATATATTTC TGAATACGCT CTTCGAAGAC TGTATTTAGG GAATGATGAT AACGATGCAG AGCTATACAA CAGGTATCTA AGAGCACTTA TTGACAATTA CACTCATGAT GATTCTGATG TTGTTATTCA CCAAGCAAGC AAAGAACAAA TACTTGATGC TGGACAGTTT TCAGGCAAAC AGCCACAATC ACAAGGCCAA ACAAACAGTT CTGAAGGGTC AGGGAGAGAT GTAAATGTTG GAACAAAAGG AACATTCAGT ATTCCCCGTA TCAAAACACC AATGAGCAAA TTGACGTTGC CAAAACTTAA AGGGAAAGTT TTAGTGAATC TAGAACATCT GGTTGAATAT GAACCTGACC AAACTGATAT TTCAAATAAA CGAGCTTCTC AGGAACAACT TGGCCAATGG GTGGAAGCAG TTAAAACTTC ATACGATGTT GATGATGAAC AGCTTAAAAT CATTTTGAAT GGACTCATGG TTTGGTGTAT TGAGAACGGA ACCTCTCCAA ACATTAACGG ATTTTGGTAT ATGATTGAGG ATGGGGAACA AATAAAATTT CCGTTAAAAC CAATTGTTGA GAATGCAAAA CCTACACTTC GGCAGATCAT GGCACACTTC AGTGATTTGG CTGAGGCATA CATTGAAAAG CGCAATGCGA AGAAAGCATA TGTGCCAGGC TACGGACTAA AGCGGAATCT CAATGATTAC TCACTAGCAC GTTATGCTTT TGATTTCTAT GAGATCACAT CAAAGACTCC AGTACGCGCA CGTGAGGCAC ACATGCAGAT GAAAGCAGCA GCTCTGCGGA ACACTAGAAC TCGTCTTTTT GGTCTGGATG GCTCTGTTGG GAATAATGAT GAAAACACAG AGAGACACAC GAGCGATGAT GTGAACAGAG ACATGCACTC TCTCCTTGGG GTGCGTAACA TCTAGATATT TATATAAGTA AAAGGTTGGT AAACTTATAT AAGTATTGCA TAGTATTAGC GTGGCTTGGC CACCTTAAAT AAATACTATG TTCACTCTAC TGGTGGTTCA GTGTGGCTAT GCCATCGAAA ACTTCCAATA GAGGGGGG 
Length9538
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus3042
2 Virus0514
2.82843 Ahg947282
3 Ahg928299
4.24264 Ahg936535 Plant self-incompatibility protein S1 family
5.47723 Ahg917464 Uncharacterized protein family (UPF0016)
9.79796 Ahg952036
10.247 Ahg894438 Exostosin family protein
10.8167 Virus0372
12 Virus3365
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression