Detail



ID : Ahg314547

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314547|fgenesh1_pm.C_scaffold_1003327
Sequence
ATGAAGCTTC TTCGCCGCCG TTTCTTCAAC TCCGTCAATA CAATCACCAG ACCAAACCGG CGTCAATACG CCACAAAGTA TGTCGCCAAA GTCACTTCAT CATCTCCCTC CGGCCGATCT CTCTCCGCCG AAGTTTCTCT TCCTAATCCT CTCCCCGCCG ACGTACGAGG TTACCCTCTA CCTCGCCGTC ATCTCATCTG CAGAGCCACC AATCTCATCA TTGGAGCTAC TAATCTCTCC GATGCTTTCT CTGATCTCTC TGATTACCTC TCTTCTCTCA CACTCTCCCT CACTCCCGAC GAAGCTTCAG AGATTCTCAA ATCCCTAAAT TCTCCTCTCG TCGCCGTCGA GTTTTTCAAA TTCGTCCCTT CTCTTTGCCC TAACTCTCAA AATGACCCTT TTCTCTACAA TCGAATCATC TTAATCCTCT CAAGGTCAAA TCTTTCAGAC AGATTCGATC GTGTTCGCTC GATTCTCGAT TCCATGGTGA AATCTAACGT CCATGGAAAC ATATCAACTG TGAATATCTT AATAGGTTTC TTCGGTGACA CGGAAGATTT ACAAATGTGT TTAAGATTGG TGAAGAAATG GGGTTTAAAG ATGAACTCTT TCACTTACAA ATGTCTCCTT CAAGCTTACT TAAGATCTCG TGATTCTTCA AAAGCTTTCC ATGTGTATTG TGAGATTAGA AGAGGAGGAC ATAAGCTTGA TATCTTTGCT TACAATATGT TGCTTGATGC TTTAGCTAAA GATGAAAAGG CTTGTCAAGT TTTCGAAGAT ATGAAGAAGA GACATTGTAG AAGAGATGAG TATTCGTACA CGATTATGAT CAGGACTATG GGGAGGATTG GGAAGTATAA TGAAGCTGTT GGTTTATTCA ATGAGATGAT TACCGAAGGG CTTACGCTTA ATGTTGTTGG TTATAATACT TTGATGCAAG TTCTTGCGAA AGGGAAAATG GTTGATAAGG CGATTCAGGT TTTCTCTAGA ATGGTGGAAA CGGGTTGTCG ACCGAATGAG TATACGTATA GTCTTGTTTT GAATCTTTTA GTAGCTGAAG GTCAGCTTGT GAGGTTAGAT GGGATTGTGG AGATGTCGAA AAGATATATG ACTCAGGGGA TATATTCTTA TTTGGTTAGA ACGTTGAGCA AGTTAGGGCA TGTAAGTGAG GCCCACAGGC TGTTTTGTGA TATGTGGAGC TTCCCTGTGA AAGGAGAGAG AGATAGTTAC ATGTCGATGC TGGAGAGTTT GTGTGGTGCG GGTAAAACTA TTGAAGCGAT AGAGATGTTG AGCAAGATTC ATGAGAAAGG TGTGGTTACT GATACTATGA TGTACAACAC TGTGTTCTCG GCGCTTGGGA AGCTAAAGCA AATATCTCAT ATACATGATC TCTTCGAGAA AATGAAAAAA GACGGTCCTT CTCCAGATAT ATTCACCTAC AATATACTTA TCTCTAGTTT CGGCCGGGTA GGAGAAGTTG ATGAGGCTAT TAACATATTT GAGGAGCTTG AGAGGAGTGA CTGTAAACCC GACATTATTT CTTACAACTC TTTGATTAAT TGTTTGGGGA AGAACGGTGA TGTTGATGAA GCCCATGTGA GATTCAAGGA GATGCAAGAG AAAGGATTAA ACCCTGATGT GGTCACATAC AGCACTCTGA TGGAATGTTT TGGGAAGACA GAGAGAGTCG AAATGGCGTA TAGTTTGTTC GAAGAGATGC TTGTTAAAGG GTGTCAACCA AACATTGTGA CGTACAACAT TTTGCTTGAT TGTCTAGAGA AGAGCGGGAG AACCGCGGAA GCAGTTGATC TGTACACAAA GATGAAACAG CAAGGACTCA CACCGGATTC CATTACCTAC ACTGTGCTTG AACGGTTGCA GTCTGGCTCT CATGGAAAAT CTCGTATCCG TAGGAAGAAT CCGATAACAG GTTGGGTTGT CAGCCCTCTG TAA 
Length1953
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26288317.. 26290380
Download Sequence
A.thaliana
AGI-codeAT1G51965.1
DescriptionABA Overly-Sensitive 5
TAIR curator summaryEncodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid.
Alias[ABO5][ABA Overly-Sensitive 5]
Gene coexpression
MR
MR Locus Description
13.2665 Ahg906953 Protein kinase superfamily protein
21 Ahg486707 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
21.2368 Ahg477717 AT hook motif DNA-binding family protein
40.2989 Ahg489367 TBP-associated factor 5
41.1096 Ahg933732 Thioredoxin superfamily protein
47.6865 Ahg943440 Tetratricopeptide repeat (TPR)-like superfamily protein
47.7179 Ahg480442 Zinc finger C-x8-C-x5-C-x3-H type family protein
60 Ahg888008
63.1664 Ahg924398 emp24/gp25L/p24 family/GOLD family protein
69.6707 Ahg941854 prefoldin 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression