Detail



ID : Ahg314676

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314676|fgenesh1_pm.C_scaffold_1003456
Sequence
ATGGTGATGA GGCCGATTAC GAACAAAGGA TTAATTTACA GACACAATCT TTGTCTGAGA TGTAATTCTA CGCTTGCTGT CTCTAACCAC GAGCCCATTA CCCAGAAAAC ACGAAGCTTT CTGGAGACGA CGACGACGAG CACAGCTATC TTTCAATGCA ATTCTCAGAT TTCGAAGCTC GCGAGAAATG GGAATCTCCA AGAGGCTGAA GCTATATTTA GACAAATGTC GCATAGAAGT ATTGTCTCTT GGAATGCGAT GATTTCTGCT TACGCGGAGA ATGGTAAGAT GAGTAAAGCA TGGCAAGTGT TCGATGAAAT GCCTGTGAGA GCTACAACTT CTTATAATGC GATGATTACT GCTATGATTA AAAACAAGTG TGATTTAGGG AAAGCTTATG AATTGTTTTG TGATATACCG GAGAAGAACG CGGTTTCTTA TGCGACGATG ATTACTGGTT TCGTTCGGGC AGGGAGGTTT GATGAGGCGG AATGTTTGTA TGCTGAGACA CCTGTGAAGT TTCGTGATCC TGTTGCTTCG AATGTTTTGT TAAGTGGGTA TTTGAGAGCA GGGAAATGGA ACGAGGCTGT TCGTGTTTTT GAGGGTATGG CTGTGAAAGA AGTGGTATCG TATAGCTCAA TGGTTGATGG GTACTGCAAA ATGGGGAGAA TTTTGGATGC GAGAAGTCTT TTTGATAGAA TGCCTGAGAG AAATGTGATT ACTTGGACTG CTATGATTGA TGGGTATTTT AAAGCTGGGT TTTTTGAAGA TGGGTTTGGT CTGTTTCTGA GAATGAGACA GGAGGGAGAT GTCAGGGTAA ATTCTAATAC TTTGGCTGTA ATGTTTAGAG CATGTCGGGA TTTTTTCAGA TACCGAGAGG GAAGTCAGAT TCATGGGTTA GTTTCACGAA TGCCTCTGGA GTTTGATCTG TTTCTAGGGA ATTCATTGAT TTCGATGTAC TCTAAGCTTG GTTATATGGG AGAGGCCAAA GCGGTGTTTG GCGTGATGAA ATATAAAGAC AGTGTTTCTT GGAATTCCTT GATCACGGGT CTTGTTCAGC GCGAACAGAT TTCTGAAGCT TATGAACTTT TCGAGAAGAT GCCGGGTAAA GATATGGTAT CCTGGACAGA TATGATCAAG GGGTTTTCTG GAAAAGGAGA AATCTCTAAA TGTGTGGAGT TGTTTGGAAT GATGCCTGAG AAGGACGACA TAACATGGAC TGCTATGATA TCTGCTTTTG TGAGCAATGG ATATTATGAG GAGGCGCTTT GCTGGTTTCA TAAGATGCTT CGGAAACAGG TTTGTCCAAA TTCCTACACT TTCAGTAGTG TCCTCAGCGC AACAGCTAGT TTGGCGGATT TAATTGAAGG ACTACAGATC CACGGTAGAG TTGTGAAGAT GAACATGGCG AATGACTTGT CAGTTCAGAA TTCATTGGTA TCTATGTATT GCAAATGCGG GAACACAAAT GATGCTTACA AGATCTTCTC ATGCATCAGT GAGCCCAATA TTGTTTCTTA TAACACGATG ATCAGCGGGT TTTCCTATAA CGGCTTCGGG AAGGAAGCTG TTAAATTGTT CTCCATGTTG GAAAGTACAG GAAAAGAGCC GAATGGTGTT ACCTTTCTTG CTCTGTTATC AGCCTGTGTT CATGTTGGAT ACGTGGACTT AGGATGGAAA TACTTCAAAT CTATGAAGTT CTCGTACGGC ATTGAACCAG GACCTGATCA TTATGCATGC ATTGTTGATC TTTTTGGCAG AAGTGGATTA CTTGATGAAG CATATAACTT GATCTCTACA ATGCCTTGTG AGCCTCATTC TGGAGTTTGG GGCAGCTTGC TTAGTGCAAG CAAAACTCAT TTACGTGTCG ATCTAGCAGA GCTTGCTGCT AAGAAACTAA TCGAACTTGA GCCTGATAGC GCAACACCTT ACGTGGTATT ATCCCAGCTA TATTCAATGG TTGGGAAAAA CAGTGATTGT GATCGGATAA TGAATATCAA GAAATCGAAA AGAATAAAGA AGGATCCCGG GTCTAGCTGG ATAATCTTAA AGGGTCAAGT GCATAATTTC CTTGCAGGAG ATGAATCTCA TCTGAATCTT GAAGAGATAG CTTTCACACT GGATATGATT GGAAATGAAA TGGAATTGAT TACCTTTGGT GGGTTCTTTG TTTTGATGGG AATATTGGTG TGTATTTTGG AGTCGGGGAA GAAGGAGACT GTCACTAATT ATGGAGGGTC TGCACAAAAG CCTAACAACC AGAGAACCAG AGCGGTAAGA ACAAGCAATG GTGGCTACAT GTTTTATCCA GCTGCTGCGT CTCTCCCTAC TCTCTCCTAC AATCACCGCC ACCATCATGC CGGTGGCCAT CACGGCGGAC ATCATGGCGG TGGTGGTTGT GGTGGTGGTG GACATCATGG TGGTGGTGGT GGTGATGGTG GTGGTGGCTG TGGAGGAGGA GGATGTGGTG GCGGCGGAGG AAGTTAA 
Length2487
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27223203.. 27228648
Download Sequence
A.thaliana
AGI-codeAT1G53600.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.6767 Ahg921700 ENTH/VHS/GAT family protein
45.0555 Ahg351609 Protein of Unknown Function (DUF239)
47.0532 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
54.7723 Ahg890578 HSP20-like chaperone
55.9017 Ahg936933
68.8912 Ahg907632
79.1518 Ahg945592
82.1706 Ahg350644 Lateral organ boundaries (LOB) domain family protein
85.4868 Ahg912232 Proline-rich extensin-like family protein
98.9545 Ahg925744
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression