Detail



ID : Ahg314930

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314930|fgenesh1_pm.C_scaffold_1003710
Sequence
ATGAGCATAA CGAAATTTGC ACGCTCCAAT GCGTTTAAAC CAATCCCAAA CTTTGTCAGA AGCTCTCTAC GCAACGCTTG CGTCGAGTCA AGTCAAAACA CAGAGTCTCC TCCATATAAA CCCAAGAAGC ATCACATTTT AGCAACAAAT CTCATCGTTT CATATTTCGA AAAAGGTTTA GTCGAAGAAG CACGCTCACT GTTCGACGAA ATGCCTGAGA GAGACGTAGT TGCTTGGACT GCAATGATTA CTGGTTACGC TTCTTCCAAC TACAATTCTT GTGCTTGGGA GTGTTTTCAC GAGATGTTTA AGCAAGGAAG GAGTCCGAAT GAGTTCACGC TCTCGAGTGT TTTGAAGTCT TGTAGAAACA TGAAGGTTTT GGCTTATGGT GCTTTGGTTC ATGGAGTTGT GGTTAAACTT GGTATGGAAG GTTCTTTGTA TGTTGACAAT GCGTTAATGA ATATGTACGC TACTTGTTCG GTAACAATGG AGGCGGCTTT TTTGATTTTT CGGGATATTA AAGTTAAAAA TGATGTTACA TGGACTACTT TAATCACCGG GTTTACACAT TTGGGTGATG GCATTGGTGG TTTGAAGATG TATAAGCAAA TGTTGCTGGA GAATGCAGAT GTGACACCTT ACTGTATAAC GATAGCGGTT AGAGCTTCTG CTTCGATTGA TTCTGTTACA ACCGGCAAGC AAATTCATGC GTCGGTGGTT AAACGCGGGT TTCAGTCTAA CCTTCCGGTG ATGAACTCTA TATTAGACTT TTATTGCAGG TGTGGTTATT TATCAGAGGC GAAACGCTAT TTCCATGAGA TGGAAGATAA AGATTTAATC ACATGGAACA CTTTAATATC CGAGCTTGAG CGATCAGATA GTAGTGAAGC TCTGCTTATG TTTCAGCGGT TTGAATCGCA AGGCTTTGTT CCGAATTGTT ACACTTTCAC AAGTTTAGTT GCTGCCAGCG CCAATATAGC GGCATTGAAC TGTGGCCAGC AACTTCATGG AAGGATTTAT AGAAGAGGGT TTAACAAGAA CGTTGAGTTA GCTAATGCTT TGATCGATAT GTATGCTAAA TGCGGTGATA TACCAGACTC TGAAAGAGTA TTTGGCGAAA TCGAAGAGAG GAGGAATTTG GTTTCTTGGA CTTCAATGAT GATTGGGTAT GGGTCACATG GTTATGGAGC AGAAGCTGTT GAGCTTTTTG ACAAAATGGT TTGTTCGGGT ATTAGACCTG ACCGGATTGT GTTCATGGCA GTTCTGAGCG CGTGCCGCCA TGCTGGTCTA GTGGAGAAAG GATTAAAGTA CTTTAATGTG ATGGAAAGTG AGTATGGCAT AAATCCAGAC CGAGATATTT ACAACTGTGT GGTGGATGTG CTTGGAAGAG CTGGGAAAAT AGGCGAGGCT TATGAATTGG TTGAGAGGAT GCCATTTAAG CCAGACGAAT CCACTTGGGG AGCGATTTTG GGGGCTTGTA AAGCGCATAA ACACACAGGA TTGATAAGCA GATTAGCTGC AAAAAAAGTT ATGGAGTTGA AACCGAGAAT GGTGGGGACT TATGTGATGC TTTCATACAT CTATGCAGCA GAAGGGAAGT GGGTCGAATT CGCGAGAGTG AGGAAGATGA TGAGGATGAT GGGGAACAAA AAAGAAGCCG GTATGAGCTG GATCGAGGTG GAAAATCAAG TTTTTAGTTT TGCCGTGAGC GATAAAATGT GTCCTAACGC GACTTCTGTG TATTCAGTCT TGGGGTTACT GATAGAAGAG ACCAAAGATG CTGGCTATGT TCCTGACTTA GACTCCCTAG TTCATGATCA AGAAGTCGGA ACTTAA 
Length1836
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30892673.. 30894598
Download Sequence
A.thaliana
AGI-codeAT1G56570.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[PGN][PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NaCl]
Gene coexpression
MR
MR Locus Description
39.3954 Ahg890845
80.399 Ahg344438
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression