Detail



ID : Ahg317500

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317500|fgenesh1_pm.C_scaffold_3000516
Sequence
ATGGAAGTTT CGGTGATTGG AAATCCTCAG GGGAGGATCT GTAGAGTAGA ATTAGCAGAG AGGGTCAATA GATTTTGCAT TGGGTCTGAA TTCATCTCGA TTAATGCAAG AACTCACGTT AGCTTCTATG GAGAATCCAG GAGGCGAAAC GAGATCAACC TCTGTTTCTC GCAATGCTCT ATCAGATGCG AAGCCGTCGT CTCTGATAAA TCTCCGTTAT TGAAATCAAC TCCAAGAAGA ACTAGATCGC GTAAGATTAT ACGTTGCGCT TCCTTTGGAT ACAGTTTCAG AAGCAACACC GTAAACCACA CCAAAGCAAT CGCCGCGGGA CTTAAAGCTC TGAAGCTTCT TGGAGTAGAA GGTGTTGATC TGCCAATCTT CTGGGGAGTG GCTGAGACAG AATCCCCTGG AAATAACCAG TGGTCAGGTT ACTTAGCCAT CGCAGAGATG GTAAAAAAAA CGGGTTTTAA GCTTCACGTA TCTCTCTGTT TCCATGGCTC GAAACAGCCA GGATTATCTC TCCCTGACTG GGTGACTCAT CGGTCTGGGA GTCAGTACAA AGATTGTTTA TCTTTTGCTG TTGATGATGT TCATGTTCTT GATGACGGTG AGCTGAGATA TCCTTCTCAT CAAACCAGGA AACTCTCTGA TGGTGCAGGA GAGTTTCAGT GTTATGATAA GTACATGCTT GTCGCTCTCA AATACATGCT TTGGGGACTC AGCGGTCCGC ACGATGCTCC TTATTATGAT CAACGGCCTA ATTCAGCTCC ATTCTTCTCG GATGGTGGAT CATGGGAATC GGAATATGGT GATTTCTTCC TTGCTTGGTA TTCGTCTCTT CTCGTCTCCC ACGCAGACCG AGTTCTTTCT CTTGCTTCTT CTGTATTTAG CGGCACAGGA TTGCCTCTAT GCGGGCAGTT ACCTCTCTTG CATCAATGGC ACAAGCTACG TTCCAGGCCT TCCGAGTCAA CAGCTGGATT TTACTGCAAT GGAGACAATG ATAGGTATGA GGCTGTTGCA GAGACCTTTG CAAAGAACTC TTGTAGAATG ATACTGCCTG GGATGGATTT ATCAGACGAG TATCAATCGC CGAAATCTCT CTCGAGCCCC GAGTCATTGC TTGCCCACAT CAAGACTTGT TGCAAGAAAC ACGGAGTCGT CGTTTCAGGA CAAAACTCAT CCGAACCAAA CCTTGGCGGG TTTGAGAAGA TCAAAGAGAA CCTAAAGGAC GAGAATGCAG CGATAGATCT GTTCACGTAC CAGAGAATGG GAGCACTTTT CTTTTCCCCA GATCATTTCC ATGCCTTCAC AGAGTTTGTC CGGAACCTTA GCCAGTTTAA GCAACCAGAA GATGATCTTT GA 
Length1362
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2439788.. 2441482
Download Sequence
A.thaliana
AGI-codeAT5G18670.1
Descriptionbeta-amylase 3
TAIR curator summaryputative beta-amylase BMY3 (BMY3)
Alias[BAM9][BMY3][BETA-AMYLASE 9][beta-amylase 3]
Gene coexpression
MR
MR Locus Description
17.8606 Ahg482962 Disease resistance-responsive (dirigent-like protein) family protein
28.4429 Ahg945635 isopentenyltransferase 4
36.4143 Ahg934600 MATE efflux family protein
36.5513 Ahg338220 S-locus lectin protein kinase family protein
39.6737 Ahg914550
48.8262 Ahg494841 HXXXD-type acyl-transferase family protein
53.1225 Ahg913537
54.7723 Ahg926860 RmlC-like cupins superfamily protein
66.2193 Ahg340457
71.2461 Ahg478237 laccase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression