| Annotation |
|---|
| Description | jgi|Araly1|319227|fgenesh1_pm.C_scaffold_3002243 |
| Sequence |
ATGGAGCTGG AGATGGAACG GAGATTGAAG AAAGAACACA ATGCTAAAGT GAAAGCTCTG AAGAAACAAA AGGCTATCGA GAAAGCAAAG CTGGGAGAAT TGAATGCAAA ATCTAAAAAG AGCGCAGCGA AGAAGATAGG AAAAGAGGAA GAGAATCATG CCGATTTTTC TGACCCAGAA ACTCCTATTG GCGAGAGGAA AAGGCTATCT TCACAGATGG CCAAACATTA CAGTCCTTCA GCGGTGGAAA AATCGTGGTA TGAATGGTGG GAGACATCTG AGTTTTTCAA GGCTGACGCG ACTAGTTCCA AACCACAGTT TGTGATTGTT CTTCCTCCTC CCAATGTGAC TGGCGCGTTG CACATCGGCC ACGCACTAAC CTGTGCAGTC CAGGACACAC TGATTCGTTG GAAGAGAATG TCTGGCTTTA ATGCTTTGTG GGTTCCTGGG TTTGACCATG CTGGTATTGC TACACAGGTT GTGGTCGAGA AACATCTCAG CCGTGAAACA GGATTGACAA GACATGACTT TGGCCGTGAG GAGTTCTTGA ACCATGTCTG GCAGTGGACA GAGAGTAAAA GTGGTACAAT CAAATCACAG CTACGTCGTA TGGGCTCATC TCTTGATTGG TCCCGTGAGT GTTTTACCAT GGACGAGCAC AGATCAAAGG CTGTCACTGA GGCCTTTGTA AGGTTACACA AGGAAGGGCT TATCTACAGG GATCTCCGGC TTGTTCATTG GGACTGCTTC CTTAGCACCG CCATATCTAA GCGTGAGGTT GAGCATATCG AGATCAAAGA AAGAACACCA ATCAAAGTCC CTGGGTATGA GAAGCCAGTT GTATTTGGTC TTATCACTTC GTTTGCTTAC CCTCTTGAGA GAGGAGGCGG TGAGGTTGTT GTTGCCACTA CTAGGGTGGA AACTATGCTT GGTGATACCG CCATTGCTGT TCATCCCGAT GATGCAAGAT ACAAGCATCT TCACGGAGAG TTTGCTGTGC ACCCGTTCAA TGGGCGGAAG CTACCAATCA TCTGTGATGA GATACTCGTT GACCCAAATG TTGGTACTGG TTGTGTTAAG ATCACTCCAG CACATGACAC CAATGATTTC GATGTAGGAA GGCGCCACAA TCTGGAGTTT ATAAACGTAT TCACTGATGA TGGAAGGATC AATGCGAATG GCGGGCCTGA CTTCACTGGC ATGCCACGCT TTGCCGCTCG TGAAGCTATC GTTGAAGCTC TGCGTAAGAA GGGGCTGTAC AGAGGTGAGG AAAACAACAA GATGACAATT GGAGTTTGCT CAAGAAGTAG TGATGTTGCT GAGCCTATGC TAAAGCCTCA GTGGTACGTG AGTTGCAGCC TGATGGCAAA GGAGGCTCTT GATGTTGCTG CCAACGGGAA GATTGAGTTT ATTCCCAAGC AGTACTCTGC AGAATGGAGA AGATGGCTAG AGAGCATATG CGACTGGTGC ATCTCCAGAC AGCTTTGGTG GGGTCACAGA ATACCGGCAT GGTACGCCAC TCTAGAAGAA GATCAGCTTA AGGAAACAGG TGCCTACAAC GACCATTGGG TCGTTGCCAG AAACGAGGAA GAAGCTCGAA AAGAGGCTGC ACAAAAATTT TCTGGGAAGA AGTTGTTGGA GCTCTCCCAA GATCCTGATG TGCTTGACAC TTGGTTTTCC TCTGGTCTCT TTCCCTTATC TGTTTTGGGA TGGCCTGATG AAACTGAGGA CTTCAAAGCT TTCTATCCAA CGTCTGTTCT TGAAACTGGA CATGACATTC TGTTTTTCTG GGTTGCTCGC ATGGTTATGT TAGGAATGAA AGTGGGTGGT GGGGATGTTC CTTTCAGGAA GGTTTTTTTG CATCCCATGA TACGTGATGC ACATGGCCGC AAGATGTCAA AGTCTCTTGG AAATGGCATT GATCCGCTTG AAGTCATTAA CGGTGTAACT CTCGCAGGTC TACACGCCAG GTTAGAAGAA GGTAACCTGG ATCCCAAGGA GCTGGTTGTT GCCAAGGAGG GACAGGTGAA GGATTTTCCA AATGGTATCC CTGAATGTGG CGCTGACTCT CTTCGATTTG CCCTTGTATC TTACACGGCC CAGTCTGATA AAATCAACAT GGATGTCCTC CGAGTTGTTG GTTACCGCCA GTGGTGTAAT AAACTGTGGA ACGCCGTCAG ATTTGCGATG ATGAAGCTTG GTGATGGCTA TACTCCTCCT TCGCAAGTTC TAAGCCCTGG AGCCATGCCC TTCAGCTGCC AATGGATCCT TTCTGTACTA AATACGGCAA TATCAAAGAC TGTGGATTCC TTGAAAGCTT TTGAGTTATC GGATGCAGCC AACACGGTGT ATGCCTGGTG GCAATACCAA TTCTGTGATG TATTTATCGA AGCAGTTAAG CCTTATTTTT CTGCTGAAAA CCCAGGCAGG ACCCATGCAC AAGACGCTCT CTGGGTGTGT CTCGAGACTG GCTTGCGATT GCTGCATCCG TTTATGCCTT TTGTAACAGA AGAGCTGTGG CAGCGGTTGC CGTCACCGCA AGACTGTGAA CGGAAGGCGT CTATCATGAT ATGTGACTAC CCTTCTCCCG AAGAGAAGTG GACAAACGAG AAGGTGGAGA CCGAAATGGA CGTGGTTCTG GTGACCGTGA AAACTCTCAG AGCTTTGAGA GCTGCAGAGT CGCTAAAGAG ATGGATAAAT GAAAGGTTGC ATGCGTTTGC TCTGTGCGAA AACGCATTGA CACTGGGAAT TGTGCAATCC CATGAGTTGG AGATCAGAAC TTTGGCAAAT CTCTCATCCT TTGAGGTTGT GTTGAAGGGA GAAGACAAAG CAGCCCAATC TGGATCGGCT GTTGTAGAGA CTGTGAATGA GAACCTCAAG GTGTATCTAA AATTGGATGG AGCTTCCATT AATGCGGAAG CTGAGTCTGA GAAAATCAGA AACAAGATTA TAGAAGTACA AAAGCAAAAG GAGAAGTTGC AGAAGGTAAT GGGGGTGACT GGGTACGAAG ACAAGATCCC TGCAAACATT AGGGAAGACA ACTTGAGGAA GCTCTCAAAG TTTCTTGAAG AATTCCGATT TCTGAGTGAC CGTACTGTTT CAGAGGCCTA A |
| Length | 3111 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 12166858.. 12170005 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G14610.1 |
| Description | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) |
| TAIR curator summary | Required for proper proliferation of basal cells. |
| Alias | [TWN2][VALRS][TWIN 2][VALYL TRNA SYNTHETASE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg887641 | Disease resistance protein (TIR-NBS-LRR class) |
| 5.83095 |
Ahg318716 | Glycosyl hydrolase family protein |
| 6.7082 |
Ahg495722 | expansin A14 |
| 11.6189 |
Ahg471969 | Disease resistance protein (TIR-NBS-LRR class) family |
| 13.8564 |
Ahg490864 | LOB domain-containing protein 39 |
| 14.4914 |
Ahg485080 | Glycosyl hydrolase family protein |
| 16 |
Ahg485847 | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| 16.4924 |
Ahg470343 | Cystatin/monellin superfamily protein |
| 20.4939 |
Ahg928349 | UB-like protease 1A |
| 23.0434 |
Ahg483189 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|